RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 VKORC1L1Q8N0U8 176 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 TMEM229BQ8NBD8 167 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 KLHL30-AS1Q8NEE0 82 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 DMBX1Q8NFW5 382 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 OR4D10Q8NGI6 311 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 OSR1Q8TAX0 266 aaPredicted RBP5.15□□□□□ -1.59
CD44-204ENST00000279452 DDB2Q92466 427 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 DGCR14Q96DF8 476 aaKnown RBP5.15□□□□□ -1.59
CD44-204ENST00000279452 NXF2Q9GZY0 626 aaKnown RBP5.15□□□□□ -1.59
CD44-204ENST00000279452 HRASLSQ9HDD0 168 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 MCUBQ9NWR8 336 aa5.15□□□□□ -1.59
CD44-204ENST00000279452 TSSC4Q9Y5U2 329 aaPredicted RBP5.15□□□□□ -1.59
CD44-204ENST00000279452 CTDSPLO15194 276 aa5.14□□□□□ -1.59
CD44-204ENST00000279452 RAMP3O60896 148 aa5.14□□□□□ -1.59
CD44-204ENST00000279452 HRASP01112 189 aa5.14□□□□□ -1.59
CD44-204ENST00000279452 IGLV2-23P01705 113 aa5.14□□□□□ -1.59
CD44-204ENST00000279452 RPLP1P05386 114 aaKnown RBP5.14□□□□□ -1.59
CD44-204ENST00000279452 PI3P19957 117 aa5.14□□□□□ -1.59
CD44-204ENST00000279452 GNRHRP30968 328 aa5.14□□□□□ -1.59
CD44-204ENST00000279452 FAUP35544 74 aaKnown RBP5.14□□□□□ -1.59
CD44-204ENST00000279452 RAB25P57735 213 aa5.14□□□□□ -1.59
CD44-204ENST00000279452 UBE2KP61086 200 aa5.14□□□□□ -1.59
CD44-204ENST00000279452 NDPQ00604 133 aa5.14□□□□□ -1.59
CD44-204ENST00000279452 SSBP1Q04837 148 aaKnown RBP5.14□□□□□ -1.59
CD44-204ENST00000279452 TMEM267Q0VDI3 215 aaPredicted RBP5.14□□□□□ -1.59
CD44-204ENST00000279452 PJVKQ0ZLH3 352 aa5.14□□□□□ -1.59
CD44-204ENST00000279452 MSMO1Q15800 293 aa5.14□□□□□ -1.59
CD44-204ENST00000279452 PRR31Q5SQ13 230 aa5.14□□□□□ -1.59
CD44-204ENST00000279452 ZNF57Q68EA5 555 aaPredicted RBP5.14□□□□□ -1.59
CD44-204ENST00000279452 ZNF660Q6AZW8 331 aaPredicted RBP5.14□□□□□ -1.59
CD44-204ENST00000279452 DHRS11Q6UWP2 260 aa5.14□□□□□ -1.59
CD44-204ENST00000279452 TBC1D26Q86UD7 250 aa5.14□□□□□ -1.59
CD44-204ENST00000279452 SLC38A6Q8IZM9 456 aa5.14□□□□□ -1.59
CD44-204ENST00000279452 Q8N402 240 aa5.14□□□□□ -1.59
CD44-204ENST00000279452 ARRDC1Q8N5I2 433 aa5.14□□□□□ -1.59
CD44-204ENST00000279452 COMMD1Q8N668 190 aa5.14□□□□□ -1.59
CD44-204ENST00000279452 LFNGQ8NES3 379 aa5.14□□□□□ -1.59
CD44-204ENST00000279452 OR4F17Q8NGA8 305 aa5.14□□□□□ -1.59
CD44-204ENST00000279452 VSTM2AQ8TAG5 236 aa5.14□□□□□ -1.59
CD44-204ENST00000279452 CASTOR1Q8WTX7 329 aa5.14□□□□□ -1.59
CD44-204ENST00000279452 OR5B12Q96R08 314 aa5.14□□□□□ -1.59
CD44-204ENST00000279452 OR4F4Q96R69 305 aa5.14□□□□□ -1.59
CD44-204ENST00000279452 THAP7Q9BT49 309 aaPredicted RBP5.14□□□□□ -1.59
CD44-204ENST00000279452 C14orf166Q9Y224 244 aaKnown RBP5.14□□□□□ -1.59
CD44-204ENST00000279452 FOXA2Q9Y261 457 aaPredicted RBP5.14□□□□□ -1.59
CD44-204ENST00000279452 FBXO7Q9Y3I1 522 aa5.14□□□□□ -1.59
CD44-204ENST00000279452 SRRM4A7MD48 611 aaKnown RBP5.13□□□□□ -1.59
CD44-204ENST00000279452 GSTZ1O43708 216 aaPredicted RBP5.13□□□□□ -1.59
CD44-204ENST00000279452 PGLYRP1O75594 196 aaPredicted RBP5.13□□□□□ -1.59
CD44-204ENST00000279452 KBTBD11O94819 623 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 OR2A4O95047 310 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 S1PR2O95136 353 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 HPRT1P00492 218 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 IGF1P05019 195 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 ELANEP08246 267 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 LPAR6P43657 344 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 PIGPP57054 158 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 TPPP2P59282 170 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 AP3S2P59780 193 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 RPL23AP62750 156 aaKnown RBP5.13□□□□□ -1.59
CD44-204ENST00000279452 CD83Q01151 205 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 FOXE3Q13461 319 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 PRSS8Q16651 343 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 TCTEX1D4Q5JR98 221 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 C10orf55Q5SWW7 151 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 FOXB2Q5VYV0 432 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 TRIQKQ629K1 86 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 ZNF562Q6V9R5 426 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 C8orf86Q6ZUL3 223 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 MMD2Q8IY49 270 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 TOMM5Q8N4H5 51 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 CCDC71LQ8N9Z2 235 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 TEX45Q8NA69 505 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 OR4C16Q8NGL9 310 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 RNASE11Q8TAA1 199 aaKnown RBP5.13□□□□□ -1.59
CD44-204ENST00000279452 ZFAND1Q8TCF1 268 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 MARCH1Q8TCQ1 289 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 CD300LFQ8TDQ1 290 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 RHOVQ96L33 236 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 MS4A10Q96PG2 267 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 FYTTD1Q96QD9 318 aaKnown RBP5.13□□□□□ -1.59
CD44-204ENST00000279452 OR2A7Q96R45 310 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 AIFM2Q9BRQ8 373 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 RSRP1Q9BUV0 290 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 ZNF430Q9H8G1 570 aaPredicted RBP5.13□□□□□ -1.59
CD44-204ENST00000279452 SLC2A9Q9NRM0 540 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 TMEM140Q9NV12 185 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 COA4Q9NYJ1 87 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 COPZ2Q9P299 210 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 V9GYH0 126 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 ATRQ13535 2644 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 MXRA5Q9NR99 2828 aa5.13□□□□□ -1.59
CD44-204ENST00000279452 TEX13DA0A0J9YY54 714 aaPredicted RBP5.12□□□□□ -1.59
CD44-204ENST00000279452 LINC00854A0A1B0GVQ3 168 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 ANKRD20A5PA0PJZ0 165 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 MSGN1A6NI15 193 aa5.12□□□□□ -1.59
CD44-204ENST00000279452 ARPC1BO15143 372 aaKnown RBP5.12□□□□□ -1.59
CD44-204ENST00000279452 RBFOX2O43251 390 aaKnown RBP eCLIP5.12□□□□□ -1.59
CD44-204ENST00000279452 RBMXL2O75526 392 aaKnown RBP5.12□□□□□ -1.59
CD44-204ENST00000279452 KRASP01116 189 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms