RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 RNASEK-C17orf49H0YIS7 233 aa13.59□□□□□ -0.23
CCDC40-201ENST00000269318 OR8U8P0C7N1 319 aa13.59□□□□□ -0.23
CCDC40-201ENST00000269318 SPCS3P61009 180 aa13.59□□□□□ -0.23
CCDC40-201ENST00000269318 OR8G2PQ6IF36 304 aa13.59□□□□□ -0.23
CCDC40-201ENST00000269318 ZNF841Q6ZN19 808 aa13.59□□□□□ -0.23
CCDC40-201ENST00000269318 THNSL2Q86YJ6 484 aa13.59□□□□□ -0.23
CCDC40-201ENST00000269318 ITLN2Q8WWU7 325 aaPredicted RBP13.59□□□□□ -0.23
CCDC40-201ENST00000269318 RHOVQ96L33 236 aa13.59□□□□□ -0.23
CCDC40-201ENST00000269318 TREM1Q9NP99 234 aa13.59□□□□□ -0.23
CCDC40-201ENST00000269318 A0A087X0M5 115 aa13.58□□□□□ -0.24
CCDC40-201ENST00000269318 TRBV23-1A0A0A0MS06 115 aa13.58□□□□□ -0.24
CCDC40-201ENST00000269318 A0A1B0GX30 115 aa13.58□□□□□ -0.24
CCDC40-201ENST00000269318 FAM157AC9JC47 383 aa13.58□□□□□ -0.24
CCDC40-201ENST00000269318 GNLYP22749 145 aa13.58□□□□□ -0.24
CCDC40-201ENST00000269318 SP5Q6BEB4 398 aaPredicted RBP13.58□□□□□ -0.24
CCDC40-201ENST00000269318 OR4A47Q6IF82 309 aa13.58□□□□□ -0.24
CCDC40-201ENST00000269318 SLC25A24Q6NUK1 477 aa13.58□□□□□ -0.24
CCDC40-201ENST00000269318 ZNF429Q86V71 674 aa13.58□□□□□ -0.24
CCDC40-201ENST00000269318 C11orf42Q8N5U0 333 aa13.58□□□□□ -0.24
CCDC40-201ENST00000269318 LINC00311Q8N616 119 aa13.58□□□□□ -0.24
CCDC40-201ENST00000269318 WDR61Q9GZS3 305 aaKnown RBP13.58□□□□□ -0.24
CCDC40-201ENST00000269318 C9JQL5 133 aa13.58□□□□□ -0.24
CCDC40-201ENST00000269318 IFNA17P01571 189 aa13.58□□□□□ -0.24
CCDC40-201ENST00000269318 ARG1P05089 322 aa13.58□□□□□ -0.24
CCDC40-201ENST00000269318 SOD3P08294 240 aa13.58□□□□□ -0.24
CCDC40-201ENST00000269318 DVL1P1P54792 670 aaPredicted RBP13.58□□□□□ -0.24
CCDC40-201ENST00000269318 ATRAIDQ6UW56 229 aa13.58□□□□□ -0.24
CCDC40-201ENST00000269318 SCGB1C1Q8TD33 95 aa13.58□□□□□ -0.24
CCDC40-201ENST00000269318 RAB39BQ96DA2 213 aa13.58□□□□□ -0.24
CCDC40-201ENST00000269318 RBMXL1Q96E39 390 aaKnown RBP13.58□□□□□ -0.24
CCDC40-201ENST00000269318 PSMG3Q9BT73 122 aaPredicted RBP13.58□□□□□ -0.24
CCDC40-201ENST00000269318 RSG1Q9BU20 258 aa13.58□□□□□ -0.24
CCDC40-201ENST00000269318 RAB1BQ9H0U4 201 aa13.58□□□□□ -0.24
CCDC40-201ENST00000269318 HIPK2Q9H2X6 1198 aa13.58□□□□□ -0.24
CCDC40-201ENST00000269318 RALYQ9UKM9 306 aaKnown RBP13.58□□□□□ -0.24
CCDC40-201ENST00000269318 CARHSP1Q9Y2V2 147 aaKnown RBP13.58□□□□□ -0.24
CCDC40-201ENST00000269318 FBXO7Q9Y3I1 522 aa13.58□□□□□ -0.24
CCDC40-201ENST00000269318 HIVEP3Q5T1R4 2406 aa13.57□□□□□ -0.24
CCDC40-201ENST00000269318 C15orf61A6NNL5 157 aa13.57□□□□□ -0.24
CCDC40-201ENST00000269318 C15orf62A8K5M9 175 aa13.57□□□□□ -0.24
CCDC40-201ENST00000269318 LY86O95711 162 aa13.57□□□□□ -0.24
CCDC40-201ENST00000269318 IL6RP08887 468 aaPredicted RBP13.57□□□□□ -0.24
CCDC40-201ENST00000269318 AGAP20933 346 aa13.57□□□□□ -0.24
CCDC40-201ENST00000269318 VDAC2P45880 294 aaPredicted RBP13.57□□□□□ -0.24
CCDC40-201ENST00000269318 DPPA3Q6W0C5 159 aa13.57□□□□□ -0.24
CCDC40-201ENST00000269318 J3QR06 171 aa13.56□□□□□ -0.24
CCDC40-201ENST00000269318 HRASP01112 189 aa13.56□□□□□ -0.24
CCDC40-201ENST00000269318 IGKV1-16P04430 117 aa13.56□□□□□ -0.24
CCDC40-201ENST00000269318 IGHV1-8P0DP01 117 aa13.56□□□□□ -0.24
CCDC40-201ENST00000269318 M6PRP20645 277 aa13.56□□□□□ -0.24
CCDC40-201ENST00000269318 GNB2P62879 340 aa13.56□□□□□ -0.24
CCDC40-201ENST00000269318 ATP6V1FQ16864 119 aa13.56□□□□□ -0.24
CCDC40-201ENST00000269318 RTL8BQ17RB0 113 aa13.56□□□□□ -0.24
CCDC40-201ENST00000269318 AKR1C8PQ5T2L2 129 aa13.56□□□□□ -0.24
CCDC40-201ENST00000269318 DHRS7BQ6IAN0 325 aaPredicted RBP13.56□□□□□ -0.24
CCDC40-201ENST00000269318 SPSB3Q6PJ21 355 aa13.56□□□□□ -0.24
CCDC40-201ENST00000269318 MRPL20Q9BYC9 149 aaKnown RBP13.56□□□□□ -0.24
CCDC40-201ENST00000269318 SLC35D1Q9NTN3 355 aa13.56□□□□□ -0.24
CCDC40-201ENST00000269318 TMEM14BQ9NUH8 114 aa13.56□□□□□ -0.24
CCDC40-201ENST00000269318 FOXA2Q9Y261 457 aaPredicted RBP13.56□□□□□ -0.24
CCDC40-201ENST00000269318 HRNRQ86YZ3 2850 aaPredicted RBP13.56□□□□□ -0.24
CCDC40-201ENST00000269318 UBE2L5PA0A1B0GUS4 154 aa13.56□□□□□ -0.24
CCDC40-201ENST00000269318 A0A1W2PPR1 153 aa13.56□□□□□ -0.24
CCDC40-201ENST00000269318 F8W036 122 aa13.56□□□□□ -0.24
CCDC40-201ENST00000269318 DEFA5Q01523 94 aa13.56□□□□□ -0.24
CCDC40-201ENST00000269318 VWC2Q2TAL6 325 aa13.56□□□□□ -0.24
CCDC40-201ENST00000269318 FAM71F2Q6NXP2 309 aa13.56□□□□□ -0.24
CCDC40-201ENST00000269318 DTX2Q86UW9 622 aa13.56□□□□□ -0.24
CCDC40-201ENST00000269318 OR10P1Q8NGE3 313 aa13.56□□□□□ -0.24
CCDC40-201ENST00000269318 OR13D1Q8NGV5 346 aa13.56□□□□□ -0.24
CCDC40-201ENST00000269318 TAF15Q92804 592 aaKnown RBP eCLIP13.56□□□□□ -0.24
CCDC40-201ENST00000269318 ST6GALNAC6Q969X2 333 aa13.56□□□□□ -0.24
CCDC40-201ENST00000269318 PINX1Q96BK5 328 aaKnown RBP13.56□□□□□ -0.24
CCDC40-201ENST00000269318 TMEM147Q9BVK8 224 aa13.56□□□□□ -0.24
CCDC40-201ENST00000269318 SEC11CQ9BY50 192 aa13.56□□□□□ -0.24
CCDC40-201ENST00000269318 ABCA4P78363 2273 aa13.55□□□□□ -0.24
CCDC40-201ENST00000269318 SRRM4A7MD48 611 aaKnown RBP13.55□□□□□ -0.24
CCDC40-201ENST00000269318 LY6HO94772 140 aa13.55□□□□□ -0.24
CCDC40-201ENST00000269318 ZNF137PP52743 207 aa13.55□□□□□ -0.24
CCDC40-201ENST00000269318 AVPI1Q5T686 147 aa13.55□□□□□ -0.24
CCDC40-201ENST00000269318 LFNGQ8NES3 379 aa13.55□□□□□ -0.24
CCDC40-201ENST00000269318 OR5AN1Q8NGI8 311 aa13.55□□□□□ -0.24
CCDC40-201ENST00000269318 TCF19Q9Y242 345 aa13.55□□□□□ -0.24
CCDC40-201ENST00000269318 LRBAP50851 2863 aa13.54□□□□□ -0.24
CCDC40-201ENST00000269318 H0YJW9 148 aa13.54□□□□□ -0.24
CCDC40-201ENST00000269318 SFTA3P0C7M3 94 aa13.54□□□□□ -0.24
CCDC40-201ENST00000269318 RPS16P62249 146 aaKnown RBP13.54□□□□□ -0.24
CCDC40-201ENST00000269318 SERF2P84101 59 aa13.54□□□□□ -0.24
CCDC40-201ENST00000269318 GUCA2BQ16661 112 aa13.54□□□□□ -0.24
CCDC40-201ENST00000269318 GUK1Q16774 197 aa13.54□□□□□ -0.24
CCDC40-201ENST00000269318 CENPVQ7Z7K6 275 aaPredicted RBP13.54□□□□□ -0.24
CCDC40-201ENST00000269318 PUSL1Q8N0Z8 303 aaKnown RBP13.54□□□□□ -0.24
CCDC40-201ENST00000269318 OR9G1Q8NH87 305 aa13.54□□□□□ -0.24
CCDC40-201ENST00000269318 A0A1B0GW64 132 aa13.54□□□□□ -0.24
CCDC40-201ENST00000269318 GPR37O15354 613 aa13.54□□□□□ -0.24
CCDC40-201ENST00000269318 H2AFB1P0C5Y9 115 aa13.54□□□□□ -0.24
CCDC40-201ENST00000269318 CCL20P78556 96 aa13.54□□□□□ -0.24
CCDC40-201ENST00000269318 BTN1A1Q13410 526 aa13.54□□□□□ -0.24
CCDC40-201ENST00000269318 OR10X1Q8NGY0 326 aa13.54□□□□□ -0.24
CCDC40-201ENST00000269318 NEU4Q8WWR8 484 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms