RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 TRAV17A0A0B4J275 112 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 LEPROTL1O95214 131 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 MT-CO3P00414 261 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 EIF3IQ13347 325 aaKnown RBP4.95□□□□□ -1.62
VCAN-201ENST00000265077 C1orf174Q8IYL3 243 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 MRPL24Q96A35 216 aaKnown RBP4.95□□□□□ -1.62
VCAN-201ENST00000265077 SLC25A38Q96DW6 304 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 MFRPQ9BY79 579 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 TMEM50BP56557 158 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 MRPS11P82912 194 aaKnown RBP4.95□□□□□ -1.62
VCAN-201ENST00000265077 OTPQ5XKR4 325 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 MOB3BQ86TA1 216 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 AMMECR1Q9Y4X0 333 aaPredicted RBP4.95□□□□□ -1.62
VCAN-201ENST00000265077 CCL7P80098 99 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 TMEM177Q53S58 311 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 OR10D3Q8NH80 312 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 F11RQ9Y624 299 aaKnown RBP4.95□□□□□ -1.62
VCAN-201ENST00000265077 MS4A18H0YCH9 400 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 MS4A18Q3C1V0 323 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 LHFPL4Q7Z7J7 247 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 UBALD2Q8IYN6 164 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 DEFB127Q9H1M4 99 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 R3HDMLQ9H3Y0 253 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 ZNF665Q9H7R5 613 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 SF3B6Q9Y3B4 125 aaKnown RBP4.95□□□□□ -1.62
VCAN-201ENST00000265077 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.94□□□□□ -1.62
VCAN-201ENST00000265077 A0A0U1RQV5 110 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 LMX1BO60663 402 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 CSN3P07498 182 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 SMIM20Q8N5G0 67 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 DSPPQ9NZW4 1301 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 TRAV8-7A0A075B6U6 113 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 P01737 135 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 HBZP02008 142 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 ZNF841Q6ZN19 808 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 ANKRD37Q7Z713 158 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 OR8B2Q96RD0 313 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 SH3BGRL3Q9H299 93 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 TRAV9-1A0A075B6T8 112 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 hADV38S2A0JD32 116 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 CALHM1Q8IU99 346 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 SPNS2Q8IVW8 549 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 TMEM116Q8NCL8 245 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 MRGPRFQ96AM1 343 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 PERPQ96FX8 193 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 PHF7Q9BWX1 381 aaPredicted RBP4.94□□□□□ -1.62
VCAN-201ENST00000265077 IGFBP6P24592 240 aaPredicted RBP4.94□□□□□ -1.62
VCAN-201ENST00000265077 SRSF9Q13242 221 aaKnown RBP eCLIP4.94□□□□□ -1.62
VCAN-201ENST00000265077 SCGB1D4Q6XE38 83 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 LYG1Q8N1E2 194 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 GAPTQ8N292 157 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 WDR90Q96KV7 1748 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 PAGE4O60829 102 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 CCL11P51671 97 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 YBX1P67809 324 aaKnown RBP4.94□□□□□ -1.62
VCAN-201ENST00000265077 GAGE5Q13069 117 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 GAGE6Q13070 117 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 VN1R4Q7Z5H5 301 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 NFAM1Q8NET5 270 aaPredicted RBP4.94□□□□□ -1.62
VCAN-201ENST00000265077 OR2W1Q9Y3N9 320 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 LOXL2Q9Y4K0 774 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 ABCA12Q86UK0 2595 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 IGHV2-70DA0A0C4DH43 119 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 CCL25O15444 150 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 ISG15P05161 165 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 RPL30P62888 115 aaKnown RBP4.94□□□□□ -1.62
VCAN-201ENST00000265077 SPATA46Q5T0L3 261 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 OR4X2Q8NGF9 303 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 PRKNO60260 465 aaPredicted RBP4.94□□□□□ -1.62
VCAN-201ENST00000265077 RBP4P02753 201 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 WDR54Q9H977 334 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 PRNDQ9UKY0 176 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 NDUFB3O43676 98 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 TIMM23BQ5SRD1 257 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 ACSM6Q6P461 480 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 C5orf17Q8NAS9 161 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 GNRHR2Q96P88 292 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 CDX2Q99626 313 aaPredicted RBP4.94□□□□□ -1.62
VCAN-201ENST00000265077 A0A0G2JLM5 398 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 NGFRP08138 427 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 UCP1P25874 307 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 ICAM4Q14773 271 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 LINC01551Q86U37 167 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 OR1L8Q8NGR8 309 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 CLDND2Q8NHS1 167 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 PPIHO43447 177 aaKnown RBP4.94□□□□□ -1.62
VCAN-201ENST00000265077 CT62P0C5K7 136 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 GAB4Q2WGN9 574 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 RPEQ96AT9 228 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 OR2V2Q96R30 315 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 ZNF576Q9H609 170 aa4.94□□□□□ -1.62
VCAN-201ENST00000265077 ZNF716A6NP11 495 aa4.93□□□□□ -1.62
VCAN-201ENST00000265077 IL4P05112 153 aa4.93□□□□□ -1.62
VCAN-201ENST00000265077 PSG6Q00889 435 aa4.93□□□□□ -1.62
VCAN-201ENST00000265077 SRSF6Q13247 344 aaKnown RBP4.93□□□□□ -1.62
VCAN-201ENST00000265077 TMEM196Q5HYL7 178 aa4.93□□□□□ -1.62
VCAN-201ENST00000265077 WFDC8Q8IUA0 241 aa4.93□□□□□ -1.62
VCAN-201ENST00000265077 FLRT3Q9NZU0 649 aa4.93□□□□□ -1.62
VCAN-201ENST00000265077 SIRT4Q9Y6E7 314 aaPredicted RBP4.93□□□□□ -1.62
VCAN-201ENST00000265077 RHBDD2Q6NTF9 364 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 164 ms