RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 ACSM6Q6P461 480 aa15.44■□□□□ 0.06
PDLIM4-201ENST00000253754 TCF23Q7RTU1 214 aa15.44■□□□□ 0.06
PDLIM4-201ENST00000253754 FAM222BQ8WU58 562 aa15.44■□□□□ 0.06
PDLIM4-201ENST00000253754 EGLN1Q9GZT9 426 aa15.44■□□□□ 0.06
PDLIM4-201ENST00000253754 LAMP3Q9UQV4 416 aa15.44■□□□□ 0.06
PDLIM4-201ENST00000253754 CGB3P0DN86 165 aa15.43■□□□□ 0.06
PDLIM4-201ENST00000253754 CGB7P0DN87 165 aa15.43■□□□□ 0.06
PDLIM4-201ENST00000253754 CCL8P80075 99 aa15.43■□□□□ 0.06
PDLIM4-201ENST00000253754 ZNF429Q86V71 674 aa15.43■□□□□ 0.06
PDLIM4-201ENST00000253754 RPP25LQ8N5L8 163 aaKnown RBP15.43■□□□□ 0.06
PDLIM4-201ENST00000253754 GAFA1Q96PS6 74 aa15.43■□□□□ 0.06
PDLIM4-201ENST00000253754 PARD6GQ9BYG4 376 aaPredicted RBP15.43■□□□□ 0.06
PDLIM4-201ENST00000253754 OR6C3Q9NZP0 311 aa15.43■□□□□ 0.06
PDLIM4-201ENST00000253754 IL19Q9UHD0 177 aa15.43■□□□□ 0.06
PDLIM4-201ENST00000253754 TRAV3A0A0B4J244 114 aa15.43■□□□□ 0.06
PDLIM4-201ENST00000253754 ZNF727A8MUV8 499 aa15.43■□□□□ 0.06
PDLIM4-201ENST00000253754 CCL21O00585 134 aa15.43■□□□□ 0.06
PDLIM4-201ENST00000253754 TLE1Q04724 770 aa15.43■□□□□ 0.06
PDLIM4-201ENST00000253754 ZNF561Q8N587 486 aa15.43■□□□□ 0.06
PDLIM4-201ENST00000253754 OR10P1Q8NGE3 313 aa15.43■□□□□ 0.06
PDLIM4-201ENST00000253754 MBD3L1Q8WWY6 194 aa15.43■□□□□ 0.06
PDLIM4-201ENST00000253754 SEBOXQ9HB31 216 aaPredicted RBP15.43■□□□□ 0.06
PDLIM4-201ENST00000253754 CHD6Q8TD26 2715 aa15.43■□□□□ 0.06
PDLIM4-201ENST00000253754 HPRT1P00492 218 aa15.42■□□□□ 0.06
PDLIM4-201ENST00000253754 IFNA17P01571 189 aa15.42■□□□□ 0.06
PDLIM4-201ENST00000253754 BCL2P10415 239 aa15.42■□□□□ 0.06
PDLIM4-201ENST00000253754 FGF7P21781 194 aa15.42■□□□□ 0.06
PDLIM4-201ENST00000253754 KHDC3LQ587J8 217 aa15.42■□□□□ 0.06
PDLIM4-201ENST00000253754 CT45A1Q5HYN5 189 aa15.42■□□□□ 0.06
PDLIM4-201ENST00000253754 PRAMEF5Q5TYX0 476 aa15.42■□□□□ 0.06
PDLIM4-201ENST00000253754 CT45A3Q8NHU0 189 aa15.42■□□□□ 0.06
PDLIM4-201ENST00000253754 TMEM147Q9BVK8 224 aa15.42■□□□□ 0.06
PDLIM4-201ENST00000253754 MAP1LC3B2A6NCE7 125 aa15.42■□□□□ 0.06
PDLIM4-201ENST00000253754 DPRXA6NFQ7 191 aa15.42■□□□□ 0.06
PDLIM4-201ENST00000253754 RAB11AP62491 216 aa15.42■□□□□ 0.06
PDLIM4-201ENST00000253754 SDSLQ96GA7 329 aa15.42■□□□□ 0.06
PDLIM4-201ENST00000253754 MAP1LC3BQ9GZQ8 125 aa15.42■□□□□ 0.06
PDLIM4-201ENST00000253754 TUBA4BQ9H853 241 aa15.42■□□□□ 0.06
PDLIM4-201ENST00000253754 KBTBD11-OT1A0A1B0GTJ5 212 aa15.41■□□□□ 0.06
PDLIM4-201ENST00000253754 C15orf62A8K5M9 175 aa15.41■□□□□ 0.06
PDLIM4-201ENST00000253754 MMP23AO75900 390 aa15.41■□□□□ 0.06
PDLIM4-201ENST00000253754 MT-ND4LP03901 98 aa15.41■□□□□ 0.06
PDLIM4-201ENST00000253754 DEFA4P12838 97 aa15.41■□□□□ 0.06
PDLIM4-201ENST00000253754 FOLR2P14207 255 aa15.41■□□□□ 0.06
PDLIM4-201ENST00000253754 TMEM108Q6UXF1 575 aa15.41■□□□□ 0.06
PDLIM4-201ENST00000253754 SLC25A22Q9H936 323 aa15.41■□□□□ 0.06
PDLIM4-201ENST00000253754 UNKLQ9H9P5 680 aaKnown RBP15.41■□□□□ 0.06
PDLIM4-201ENST00000253754 RAI1Q7Z5J4 1906 aaPredicted RBP15.41■□□□□ 0.06
PDLIM4-201ENST00000253754 SAA2-SAA4A0A096LPE2 208 aa15.41■□□□□ 0.06
PDLIM4-201ENST00000253754 THBDP07204 575 aa15.41■□□□□ 0.06
PDLIM4-201ENST00000253754 SAA2P0DJI9 122 aaPredicted RBP15.41■□□□□ 0.06
PDLIM4-201ENST00000253754 PTAFRP25105 342 aa15.41■□□□□ 0.06
PDLIM4-201ENST00000253754 RPL35P42766 123 aaKnown RBP15.41■□□□□ 0.06
PDLIM4-201ENST00000253754 ERVFRD-1P60508 538 aa15.41■□□□□ 0.06
PDLIM4-201ENST00000253754 DLK1P80370 383 aa15.41■□□□□ 0.06
PDLIM4-201ENST00000253754 BSPH1Q075Z2 132 aa15.41■□□□□ 0.06
PDLIM4-201ENST00000253754 CIB3Q96Q77 187 aaPredicted RBP15.41■□□□□ 0.06
PDLIM4-201ENST00000253754 GFOD1Q9NXC2 390 aa15.41■□□□□ 0.06
PDLIM4-201ENST00000253754 TAGLN2P37802 199 aaKnown RBP15.4■□□□□ 0.06
PDLIM4-201ENST00000253754 GNG10P50151 68 aa15.4■□□□□ 0.06
PDLIM4-201ENST00000253754 AKR1D1P51857 326 aa15.4■□□□□ 0.06
PDLIM4-201ENST00000253754 NUP37Q8NFH4 326 aa15.4■□□□□ 0.06
PDLIM4-201ENST00000253754 PINX1Q96BK5 328 aaKnown RBP15.4■□□□□ 0.06
PDLIM4-201ENST00000253754 S1PR3Q99500 378 aa15.4■□□□□ 0.06
PDLIM4-201ENST00000253754 TMPRSS5Q9H3S3 457 aa15.4■□□□□ 0.06
PDLIM4-201ENST00000253754 CISD1Q9NZ45 108 aaKnown RBP15.4■□□□□ 0.06
PDLIM4-201ENST00000253754 ZNRD1Q9P1U0 126 aa15.4■□□□□ 0.06
PDLIM4-201ENST00000253754 OR2C1O95371 312 aa15.4■□□□□ 0.06
PDLIM4-201ENST00000253754 OR4A8P0C604 315 aa15.4■□□□□ 0.06
PDLIM4-201ENST00000253754 ADIPOQQ15848 244 aa15.4■□□□□ 0.06
PDLIM4-201ENST00000253754 FAM90A2PQ658T7 463 aa15.4■□□□□ 0.06
PDLIM4-201ENST00000253754 OR4A16Q8NH70 328 aa15.4■□□□□ 0.06
PDLIM4-201ENST00000253754 NIPSNAP3BQ9BS92 247 aa15.4■□□□□ 0.06
PDLIM4-201ENST00000253754 NPCDR1Q9BY65 106 aa15.4■□□□□ 0.06
PDLIM4-201ENST00000253754 TRGV10A0A0A0MS01 117 aa15.39■□□□□ 0.05
PDLIM4-201ENST00000253754 RAB5AP20339 215 aa15.39■□□□□ 0.05
PDLIM4-201ENST00000253754 TNFSF4P23510 183 aa15.39■□□□□ 0.05
PDLIM4-201ENST00000253754 ATP6V1FQ16864 119 aa15.39■□□□□ 0.05
PDLIM4-201ENST00000253754 ADAM5Q6NVV9 412 aa15.39■□□□□ 0.05
PDLIM4-201ENST00000253754 CENPVQ7Z7K6 275 aaPredicted RBP15.39■□□□□ 0.05
PDLIM4-201ENST00000253754 DDB2Q92466 427 aa15.39■□□□□ 0.05
PDLIM4-201ENST00000253754 BIN3Q9NQY0 253 aa15.39■□□□□ 0.05
PDLIM4-201ENST00000253754 TMEM140Q9NV12 185 aa15.39■□□□□ 0.05
PDLIM4-201ENST00000253754 TIMM9Q9Y5J7 89 aa15.39■□□□□ 0.05
PDLIM4-201ENST00000253754 FFAR4Q5NUL3 377 aa15.38■□□□□ 0.05
PDLIM4-201ENST00000253754 ZNF788Q6ZQV5 615 aa15.38■□□□□ 0.05
PDLIM4-201ENST00000253754 LYG1Q8N1E2 194 aa15.38■□□□□ 0.05
PDLIM4-201ENST00000253754 CA5BP1Q8WTZ4 195 aa15.38■□□□□ 0.05
PDLIM4-201ENST00000253754 LHX4Q969G2 390 aa15.38■□□□□ 0.05
PDLIM4-201ENST00000253754 SLC39A9Q9NUM3 307 aa15.38■□□□□ 0.05
PDLIM4-201ENST00000253754 RELBQ01201 579 aa15.38■□□□□ 0.05
PDLIM4-201ENST00000253754 ZNF343Q6P1L6 599 aa15.38■□□□□ 0.05
PDLIM4-201ENST00000253754 TVP23CQ96ET8 276 aa15.38■□□□□ 0.05
PDLIM4-201ENST00000253754 YPEL4Q96NS1 127 aa15.38■□□□□ 0.05
PDLIM4-201ENST00000253754 WFIKKN1Q96NZ8 548 aa15.38■□□□□ 0.05
PDLIM4-201ENST00000253754 ZNF251Q9BRH9 671 aa15.38■□□□□ 0.05
PDLIM4-201ENST00000253754 FAM90A27PA6NNH2 459 aa15.37■□□□□ 0.05
PDLIM4-201ENST00000253754 C1orf196B1AJZ1 125 aa15.37■□□□□ 0.05
PDLIM4-201ENST00000253754 TMPRSS2O15393 492 aa15.37■□□□□ 0.05
PDLIM4-201ENST00000253754 NQO2P16083 231 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms