RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 OR2T10Q8NGZ9 312 aa8.45□□□□□ -1.06
COPB1-201ENST00000249923 RNF24Q9Y225 148 aa8.45□□□□□ -1.06
COPB1-201ENST00000249923 TET2Q6N021 2002 aaPredicted RBP8.45□□□□□ -1.06
COPB1-201ENST00000249923 GZMBP10144 247 aa8.45□□□□□ -1.06
COPB1-201ENST00000249923 MSMPQ1L6U9 139 aa8.45□□□□□ -1.06
COPB1-201ENST00000249923 PRAMEF6Q5VXH4 476 aa8.45□□□□□ -1.06
COPB1-201ENST00000249923 VWA1Q6PCB0 445 aa8.45□□□□□ -1.06
COPB1-201ENST00000249923 PSMG3Q9BT73 122 aaPredicted RBP8.45□□□□□ -1.06
COPB1-201ENST00000249923 ABI3Q9P2A4 366 aa8.45□□□□□ -1.06
COPB1-201ENST00000249923 HSPB7Q9UBY9 170 aa8.45□□□□□ -1.06
COPB1-201ENST00000249923 TACC2O95359 2948 aa8.45□□□□□ -1.06
COPB1-201ENST00000249923 ELOA3CA0A087WX78 387 aaPredicted RBP8.44□□□□□ -1.06
COPB1-201ENST00000249923 ODAMA1E959 279 aa8.44□□□□□ -1.06
COPB1-201ENST00000249923 CYB5R3P00387 301 aaPredicted RBP8.44□□□□□ -1.06
COPB1-201ENST00000249923 WT1P19544 449 aaPredicted RBP8.44□□□□□ -1.06
COPB1-201ENST00000249923 GNB2P62879 340 aa8.44□□□□□ -1.06
COPB1-201ENST00000249923 FFAR4Q5NUL3 377 aa8.44□□□□□ -1.06
COPB1-201ENST00000249923 MOB1BQ7L9L4 216 aa8.44□□□□□ -1.06
COPB1-201ENST00000249923 WDR31Q8NA23 367 aa8.44□□□□□ -1.06
COPB1-201ENST00000249923 TAF15Q92804 592 aaKnown RBP eCLIP8.44□□□□□ -1.06
COPB1-201ENST00000249923 LIN7CQ9NUP9 197 aaKnown RBP8.44□□□□□ -1.06
COPB1-201ENST00000249923 ACTL6BO94805 426 aa8.44□□□□□ -1.06
COPB1-201ENST00000249923 OPN1MWP04001 364 aa8.44□□□□□ -1.06
COPB1-201ENST00000249923 OPN1MW2P0DN77 364 aa8.44□□□□□ -1.06
COPB1-201ENST00000249923 OPN1MW3P0DN78 364 aa8.44□□□□□ -1.06
COPB1-201ENST00000249923 ZNF90Q03938 601 aa8.44□□□□□ -1.06
COPB1-201ENST00000249923 TFF3Q07654 80 aa8.44□□□□□ -1.06
COPB1-201ENST00000249923 SLC38A11Q08AI6 406 aa8.44□□□□□ -1.06
COPB1-201ENST00000249923 FOXF2Q12947 444 aa8.44□□□□□ -1.06
COPB1-201ENST00000249923 SPRNQ5BIV9 151 aa8.44□□□□□ -1.06
COPB1-201ENST00000249923 TMEM256Q8N2U0 113 aa8.44□□□□□ -1.06
COPB1-201ENST00000249923 ZNF645Q8N7E2 425 aa8.44□□□□□ -1.06
COPB1-201ENST00000249923 AGMATQ9BSE5 352 aa8.44□□□□□ -1.06
COPB1-201ENST00000249923 DCHS2Q6V1P9 2916 aa8.44□□□□□ -1.06
COPB1-201ENST00000249923 ZG16O60844 167 aa8.44□□□□□ -1.06
COPB1-201ENST00000249923 HBZP02008 142 aa8.44□□□□□ -1.06
COPB1-201ENST00000249923 TNFSF10P50591 281 aa8.44□□□□□ -1.06
COPB1-201ENST00000249923 IQCJQ1A5X6 159 aa8.44□□□□□ -1.06
COPB1-201ENST00000249923 KCNIP4Q6PIL6 250 aa8.44□□□□□ -1.06
COPB1-201ENST00000249923 WDR82Q6UXN9 313 aa8.44□□□□□ -1.06
COPB1-201ENST00000249923 OR13A1Q8NGR1 328 aa8.44□□□□□ -1.06
COPB1-201ENST00000249923 MRGPRDQ8TDS7 321 aa8.44□□□□□ -1.06
COPB1-201ENST00000249923 GMPPAQ96IJ6 420 aaPredicted RBP8.44□□□□□ -1.06
COPB1-201ENST00000249923 GOLT1BQ9Y3E0 138 aa8.44□□□□□ -1.06
COPB1-201ENST00000249923 SVEP1Q4LDE5 3571 aa8.43□□□□□ -1.06
COPB1-201ENST00000249923 HCFC1P51610 2035 aa8.43□□□□□ -1.06
COPB1-201ENST00000249923 RIF1Q5UIP0 2472 aaKnown RBP8.43□□□□□ -1.06
COPB1-201ENST00000249923 TRAV38-1A0A0B4J264 116 aa8.43□□□□□ -1.06
COPB1-201ENST00000249923 IGKV3-15P01624 115 aa8.43□□□□□ -1.06
COPB1-201ENST00000249923 RAC2P15153 192 aa8.43□□□□□ -1.06
COPB1-201ENST00000249923 EDDM3AQ14507 147 aa8.43□□□□□ -1.06
COPB1-201ENST00000249923 TMEM164Q5U3C3 297 aa8.43□□□□□ -1.06
COPB1-201ENST00000249923 OR10G9Q8NGN4 311 aa8.43□□□□□ -1.06
COPB1-201ENST00000249923 OR10G7Q8NGN6 311 aa8.43□□□□□ -1.06
COPB1-201ENST00000249923 Q8TCH9 128 aa8.43□□□□□ -1.06
COPB1-201ENST00000249923 SDF2L1Q9HCN8 221 aa8.43□□□□□ -1.06
COPB1-201ENST00000249923 POLDIP2Q9Y2S7 368 aa8.43□□□□□ -1.06
COPB1-201ENST00000249923 SH2D1BO14796 132 aa8.43□□□□□ -1.06
COPB1-201ENST00000249923 KIR2DL2P43627 348 aaPredicted RBP8.43□□□□□ -1.06
COPB1-201ENST00000249923 HTD2P86397 168 aa8.43□□□□□ -1.06
COPB1-201ENST00000249923 Q8IYB0 196 aa8.43□□□□□ -1.06
COPB1-201ENST00000249923 DTD1Q8TEA8 209 aa8.43□□□□□ -1.06
COPB1-201ENST00000249923 NINJ1Q92982 152 aa8.43□□□□□ -1.06
COPB1-201ENST00000249923 PARLQ9H300 379 aa8.43□□□□□ -1.06
COPB1-201ENST00000249923 MDFIC2A0A1B0GVS7 189 aa8.42□□□□□ -1.06
COPB1-201ENST00000249923 LRRC30A6NM36 301 aa8.42□□□□□ -1.06
COPB1-201ENST00000249923 NDUFB4O95168 129 aa8.42□□□□□ -1.06
COPB1-201ENST00000249923 MGST1P10620 155 aaKnown RBP8.42□□□□□ -1.06
COPB1-201ENST00000249923 KITLGP21583 273 aa8.42□□□□□ -1.06
COPB1-201ENST00000249923 RND2P52198 227 aa8.42□□□□□ -1.06
COPB1-201ENST00000249923 ARG2P78540 354 aa8.42□□□□□ -1.06
COPB1-201ENST00000249923 C1orf229Q6ZS94 237 aaPredicted RBP8.42□□□□□ -1.06
COPB1-201ENST00000249923 CENPVQ7Z7K6 275 aaPredicted RBP8.42□□□□□ -1.06
COPB1-201ENST00000249923 C9orf106Q8NAJ2 232 aa8.42□□□□□ -1.06
COPB1-201ENST00000249923 NANOS1Q8WY41 292 aaKnown RBP8.42□□□□□ -1.06
COPB1-201ENST00000249923 PARD6GQ9BYG4 376 aaPredicted RBP8.42□□□□□ -1.06
COPB1-201ENST00000249923 NKX2-8O15522 239 aa8.42□□□□□ -1.06
COPB1-201ENST00000249923 PRB4P10163 310 aaPredicted RBP8.42□□□□□ -1.06
COPB1-201ENST00000249923 CD46P15529 392 aa8.42□□□□□ -1.06
COPB1-201ENST00000249923 SOX8P57073 446 aa8.42□□□□□ -1.06
COPB1-201ENST00000249923 PDLIM3Q53GG5 364 aaPredicted RBP8.42□□□□□ -1.06
COPB1-201ENST00000249923 ACP7Q6ZNF0 438 aa8.42□□□□□ -1.06
COPB1-201ENST00000249923 SGMS2Q8NHU3 365 aa8.42□□□□□ -1.06
COPB1-201ENST00000249923 SSMEM1Q8WWF3 244 aa8.42□□□□□ -1.06
COPB1-201ENST00000249923 PINX1Q96BK5 328 aaKnown RBP8.42□□□□□ -1.06
COPB1-201ENST00000249923 VAX2Q9UIW0 290 aa8.42□□□□□ -1.06
COPB1-201ENST00000249923 J3QW42 95 aa8.42□□□□□ -1.06
COPB1-201ENST00000249923 GYPAP02724 150 aa8.42□□□□□ -1.06
COPB1-201ENST00000249923 CBLN1P23435 193 aa8.42□□□□□ -1.06
COPB1-201ENST00000249923 MEF2BQ02080 365 aaPredicted RBP8.42□□□□□ -1.06
COPB1-201ENST00000249923 GCSAMLQ5JQS6 135 aa8.42□□□□□ -1.06
COPB1-201ENST00000249923 TEX38Q6PEX7 206 aa8.42□□□□□ -1.06
COPB1-201ENST00000249923 Q6ZT83 130 aa8.42□□□□□ -1.06
COPB1-201ENST00000249923 TMEM183AQ8IXX5 376 aa8.42□□□□□ -1.06
COPB1-201ENST00000249923 CD177Q8N6Q3 437 aa8.42□□□□□ -1.06
COPB1-201ENST00000249923 HSPB9Q9BQS6 159 aa8.42□□□□□ -1.06
COPB1-201ENST00000249923 ZZEF1O43149 2961 aa8.41□□□□□ -1.06
COPB1-201ENST00000249923 CBY3A6NI87 242 aa8.41□□□□□ -1.06
COPB1-201ENST00000249923 C11orf94C9JXX5 98 aa8.41□□□□□ -1.06
COPB1-201ENST00000249923 C15orf65H3BRN8 121 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms