RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Msl3l2G3X992 371 aa12.2□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Btbd35f2J3QMS5 498 aa12.2□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Btbd35f25J3QMV9 498 aa12.2□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Btbd35f26J3QNK2 498 aa12.2□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Btbd35f8J3QQ50 498 aa12.2□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Vmn2r58K7N6V2 862 aa12.2□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Gm8229K7N749 213 aa12.2□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Btbd35f17L7MU81 498 aa12.2□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Btbd35f18L7MU83 498 aa12.2□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Gm6401L7N2C0 213 aa12.2□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Olfr92L7N475 312 aa12.2□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Rbbp9O88851 186 aa12.2□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Fgf2P15655 154 aa12.2□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Rln1P47932 185 aa12.2□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Sult4a1P63046 284 aa12.2□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Rab42Q0PD08 215 aa12.2□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Btbd35f14Q1LZI5 498 aa12.2□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Gm10840Q3V2K9 103 aa12.2□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Btbd35f27Q5FWA1 498 aa12.2□□□□□ -0.46
Ercc1-201ENSMUST00000003645 ArhgdibQ61599 200 aaKnown RBP12.2□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Olfr453Q7TRV7 317 aa12.2□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Ssxb2Q8C5Z3 165 aa12.2□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Ppp1r14cQ8R4S0 164 aa12.2□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Olfr1495Q8VEZ4 319 aa12.2□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Olfr1420Q8VF55 309 aa12.2□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Olfr1501Q8VFQ3 315 aa12.2□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Olfr1446Q8VFX4 308 aa12.2□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Ms4a8Q99N10 290 aa12.2□□□□□ -0.46
Ercc1-201ENSMUST00000003645 GMCL1P1Q99N64 498 aa12.2□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Immp1lQ9CQU8 166 aa12.2□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Cmss1Q9CZT6 276 aaKnown RBP12.2□□□□□ -0.46
Ercc1-201ENSMUST00000003645 9230104L09RikQ9D264 133 aa12.2□□□□□ -0.46
Ercc1-201ENSMUST00000003645 DiabloQ9JIQ3 237 aa12.2□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Smg1Q8BKX6 3658 aaKnown RBP12.2□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Olfr1130A0A1L1SQT2 314 aa12.19□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Ankdd1aA0A1L1ST07 508 aa12.19□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Trav12-1A0N8R1 115 aa12.19□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Olfr1335B2RVY8 335 aa12.19□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Gm8126E9Q1N7 198 aa12.19□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Gm20815J3KMI0 227 aa12.19□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Gm37988J3QM41 62 aa12.19□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Gm20914J3QME2 227 aa12.19□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Gm8356J3QPD3 205 aa12.19□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Cldn1O88551 211 aa12.19□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Olfr143P34985 313 aa12.19□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Rbp4Q00724 201 aa12.19□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Zfp936Q3ULA8 456 aa12.19□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Xaf1Q5NBU8 273 aa12.19□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Klf2Q60843 354 aaKnown RBP12.19□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Sox19Q62249 55 aa12.19□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Zfp92Q62396 488 aa12.19□□□□□ -0.46
Ercc1-201ENSMUST00000003645 PnkdQ69ZP3 385 aa12.19□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Gm21292Q78EE2 227 aa12.19□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Zfp420Q7TMN8 578 aa12.19□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Upk3bQ80YF6 275 aa12.19□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Ap3s2Q8BSZ2 193 aa12.19□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Osbpl11Q8CI95 751 aa12.19□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Tmem17Q8K0U3 198 aa12.19□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Vrk3Q8K3G5 453 aa12.19□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Olfr1413Q8VGU3 323 aa12.19□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Parm1Q923D3 296 aa12.19□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Tmem33Q9CR67 247 aa12.19□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Tex36Q9D5N9 219 aa12.19□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Ndufb10Q9DCS9 176 aa12.19□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Klk1b27Q9JM71 263 aa12.19□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Wisp2Q9Z0G4 251 aa12.19□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Gm6904E9PVF1 202 aa12.18□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Vmn1r129E9QA94 307 aa12.18□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Gm8720K9J7F4 307 aa12.18□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Ntf3P20181 258 aa12.18□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Cdkn1aP39689 159 aa12.18□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Ccdc190Q3URK1 288 aa12.18□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Sntb2Q61235 520 aa12.18□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Foxb2Q64733 428 aa12.18□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Alkbh2Q6P6J4 239 aa12.18□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Q80VP5 184 aa12.18□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Psg16Q8K0U8 395 aa12.18□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Cd226Q8K4F0 333 aa12.18□□□□□ -0.46
Ercc1-201ENSMUST00000003645 StradbQ8K4T3 418 aa12.18□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Tlcd2Q8VC26 310 aa12.18□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Rwdd2bQ99M03 290 aa12.18□□□□□ -0.46
Ercc1-201ENSMUST00000003645 NanpQ9CPT3 248 aa12.18□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Slc25a22Q9D6M3 323 aa12.18□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Dctn5Q9QZB9 182 aa12.18□□□□□ -0.46
Ercc1-201ENSMUST00000003645 MthfrQ9WU20 654 aa12.18□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Sptan1P16546 2472 aaKnown RBP12.18□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Gm28961A0A087WPA5 222 aa12.18□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Gm20820A0A087WPP3 222 aa12.18□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Gm28102A0A087WQL3 222 aa12.18□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Gm20911A0A087WSS0 222 aa12.18□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Gm28870A0A0A6YW38 222 aa12.18□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Lnp1A0A1B0GSK3 178 aa12.18□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Gm15128A2ADW8 449 aa12.18□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Gm15093A2BI72 449 aa12.18□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Luzp4B1AV09 449 aa12.18□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Gm15107B1B0X0 449 aa12.18□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Cdc20bD3Z3I0 519 aa12.18□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Gm15097E9QA14 449 aa12.18□□□□□ -0.46
Ercc1-201ENSMUST00000003645 Iqcf6G3UWF2 157 aa12.18□□□□□ -0.46
Ercc1-201ENSMUST00000003645 MyadmO35682 320 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 70.5 ms