RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 NBPF5PQ86XG9 351 aaPredicted RBP8.01□□□□□ -1.13
RTTN-215ENST00000639487 MTMR8Q96EF0 704 aa8.01□□□□□ -1.13
RTTN-215ENST00000639487 CREBZFQ9NS37 354 aa8.01□□□□□ -1.13
RTTN-215ENST00000639487 FPGT-TNNI3KV9GXZ4 949 aa8.01□□□□□ -1.13
RTTN-215ENST00000639487 PTPRSQ13332 1948 aa8.01□□□□□ -1.13
RTTN-215ENST00000639487 BTNL9Q6UXG8 535 aa8.01□□□□□ -1.13
RTTN-215ENST00000639487 TEPSINQ96N21 525 aa8.01□□□□□ -1.13
RTTN-215ENST00000639487 GGA1Q9UJY5 639 aa8.01□□□□□ -1.13
RTTN-215ENST00000639487 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.01□□□□□ -1.13
RTTN-215ENST00000639487 SNHG28P0DPA3 235 aa8□□□□□ -1.13
RTTN-215ENST00000639487 MCTP2Q6DN12 878 aa8□□□□□ -1.13
RTTN-215ENST00000639487 GMCL1P1Q8NEA9 526 aa8□□□□□ -1.13
RTTN-215ENST00000639487 BICC1Q9H694 974 aaKnown RBP8□□□□□ -1.13
RTTN-215ENST00000639487 DEFB132Q7Z7B7 95 aa8□□□□□ -1.13
RTTN-215ENST00000639487 ZNF467Q7Z7K2 595 aaPredicted RBP8□□□□□ -1.13
RTTN-215ENST00000639487 ABRAQ8N0Z2 381 aa8□□□□□ -1.13
RTTN-215ENST00000639487 SHCBP1Q8NEM2 672 aa8□□□□□ -1.13
RTTN-215ENST00000639487 TMEM174Q8WUU8 243 aa8□□□□□ -1.13
RTTN-215ENST00000639487 ATP8A2Q9NTI2 1148 aa8□□□□□ -1.13
RTTN-215ENST00000639487 ITGA6P23229 1130 aa8□□□□□ -1.13
RTTN-215ENST00000639487 IGHMBP2P38935 993 aaKnown RBP8□□□□□ -1.13
RTTN-215ENST00000639487 SCNN1DP51172 638 aa8□□□□□ -1.13
RTTN-215ENST00000639487 ZFP91Q96JP5 570 aaPredicted RBP8□□□□□ -1.13
RTTN-215ENST00000639487 FAM84BQ96KN1 310 aaPredicted RBP8□□□□□ -1.13
RTTN-215ENST00000639487 USP17L3A6NCW0 530 aa7.99□□□□□ -1.13
RTTN-215ENST00000639487 USP17L4A6NCW7 530 aa7.99□□□□□ -1.13
RTTN-215ENST00000639487 CAPN15O75808 1086 aa7.99□□□□□ -1.13
RTTN-215ENST00000639487 ITGBL1O95965 494 aaPredicted RBP7.99□□□□□ -1.13
RTTN-215ENST00000639487 UBTFL1P0CB47 393 aaPredicted RBP7.99□□□□□ -1.13
RTTN-215ENST00000639487 MAP2K2P36507 400 aa7.99□□□□□ -1.13
RTTN-215ENST00000639487 USP17L1Q7RTZ2 530 aa7.99□□□□□ -1.13
RTTN-215ENST00000639487 SYNE4Q8N205 404 aa7.99□□□□□ -1.13
RTTN-215ENST00000639487 TMEM57Q8N5G2 664 aa7.99□□□□□ -1.13
RTTN-215ENST00000639487 RSPH1Q8WYR4 309 aa7.99□□□□□ -1.13
RTTN-215ENST00000639487 ACSBG1Q96GR2 724 aa7.99□□□□□ -1.13
RTTN-215ENST00000639487 FHDC1Q9C0D6 1143 aaPredicted RBP7.99□□□□□ -1.13
RTTN-215ENST00000639487 PFASO15067 1338 aa7.99□□□□□ -1.13
RTTN-215ENST00000639487 ZNF536O15090 1300 aa7.99□□□□□ -1.13
RTTN-215ENST00000639487 YDJCA8MPS7 323 aa7.99□□□□□ -1.13
RTTN-215ENST00000639487 CHRNDQ07001 517 aa7.99□□□□□ -1.13
RTTN-215ENST00000639487 IFIT5Q13325 482 aaKnown RBP7.99□□□□□ -1.13
RTTN-215ENST00000639487 MOGSQ13724 837 aa7.99□□□□□ -1.13
RTTN-215ENST00000639487 DCTN1Q14203 1278 aa7.99□□□□□ -1.13
RTTN-215ENST00000639487 EPHA10Q5JZY3 1008 aa7.99□□□□□ -1.13
RTTN-215ENST00000639487 C3orf67Q6ZVT6 689 aa7.99□□□□□ -1.13
RTTN-215ENST00000639487 RIOK1Q9BRS2 568 aaKnown RBP7.99□□□□□ -1.13
RTTN-215ENST00000639487 PRDM10Q9NQV6 1147 aa7.99□□□□□ -1.13
RTTN-215ENST00000639487 POLLQ9UGP5 575 aa7.99□□□□□ -1.13
RTTN-215ENST00000639487 ZMYM1Q5SVZ6 1142 aa7.98□□□□□ -1.13
RTTN-215ENST00000639487 RIC3Q7Z5B4 369 aa7.98□□□□□ -1.13
RTTN-215ENST00000639487 MORF4L1Q9UBU8 362 aa7.98□□□□□ -1.13
RTTN-215ENST00000639487 SRP68Q9UHB9 627 aaKnown RBP7.98□□□□□ -1.13
RTTN-215ENST00000639487 BRPF3Q9ULD4 1205 aa7.98□□□□□ -1.13
RTTN-215ENST00000639487 NLRC5Q86WI3 1866 aa7.98□□□□□ -1.13
RTTN-215ENST00000639487 FAM155AB1AL88 458 aaPredicted RBP7.98□□□□□ -1.13
RTTN-215ENST00000639487 MFAP1P55081 439 aaKnown RBP7.98□□□□□ -1.13
RTTN-215ENST00000639487 RHBDL3P58872 404 aa7.98□□□□□ -1.13
RTTN-215ENST00000639487 TKFCQ3LXA3 575 aa7.98□□□□□ -1.13
RTTN-215ENST00000639487 PROCA1Q8NCQ7 364 aaPredicted RBP7.98□□□□□ -1.13
RTTN-215ENST00000639487 FAM151AQ8WW52 585 aa7.98□□□□□ -1.13
RTTN-215ENST00000639487 MYD88Q99836 296 aa7.98□□□□□ -1.13
RTTN-215ENST00000639487 CD209Q9NNX6 404 aa7.98□□□□□ -1.13
RTTN-215ENST00000639487 COL4A2P08572 1712 aa7.98□□□□□ -1.13
RTTN-215ENST00000639487 RGS19P49795 217 aa7.98□□□□□ -1.13
RTTN-215ENST00000639487 MPNDQ8N594 471 aa7.98□□□□□ -1.13
RTTN-215ENST00000639487 SMC1BQ8NDV3 1235 aa7.98□□□□□ -1.13
RTTN-215ENST00000639487 C1orf53Q5VUE5 145 aa7.97□□□□□ -1.13
RTTN-215ENST00000639487 SMC4Q9NTJ3 1288 aa7.97□□□□□ -1.13
RTTN-215ENST00000639487 TSC2P49815 1807 aa7.97□□□□□ -1.13
RTTN-215ENST00000639487 APLP1P51693 650 aa7.97□□□□□ -1.13
RTTN-215ENST00000639487 CCDC146Q8IYE0 955 aa7.97□□□□□ -1.13
RTTN-215ENST00000639487 RPGRQ92834 1020 aaKnown RBP7.97□□□□□ -1.13
RTTN-215ENST00000639487 TSR2Q969E8 191 aaKnown RBP7.97□□□□□ -1.13
RTTN-215ENST00000639487 GREM2Q9H772 168 aa7.97□□□□□ -1.13
RTTN-215ENST00000639487 DIS3Q9Y2L1 958 aaKnown RBP7.97□□□□□ -1.13
RTTN-215ENST00000639487 CCDC9Q9Y3X0 531 aaKnown RBP7.97□□□□□ -1.13
RTTN-215ENST00000639487 PHF20L1A8MW92 1017 aa7.96□□□□□ -1.13
RTTN-215ENST00000639487 LDHCP07864 332 aa7.96□□□□□ -1.13
RTTN-215ENST00000639487 SLC10A3P09131 477 aa7.96□□□□□ -1.13
RTTN-215ENST00000639487 ADD2P35612 726 aa7.96□□□□□ -1.13
RTTN-215ENST00000639487 PPP1R18Q6NYC8 613 aa7.96□□□□□ -1.13
RTTN-215ENST00000639487 MAGEB6Q8N7X4 407 aa7.96□□□□□ -1.13
RTTN-215ENST00000639487 LTV1Q96GA3 475 aaPredicted RBP7.96□□□□□ -1.13
RTTN-215ENST00000639487 RWDD1Q9H446 243 aaPredicted RBP7.96□□□□□ -1.13
RTTN-215ENST00000639487 GNL3LQ9NVN8 582 aaKnown RBP7.96□□□□□ -1.13
RTTN-215ENST00000639487 PPME1Q9Y570 386 aa7.96□□□□□ -1.13
RTTN-215ENST00000639487 SPDYE2BA6NHP3 402 aa7.96□□□□□ -1.14
RTTN-215ENST00000639487 GLRX3O76003 335 aaKnown RBP7.96□□□□□ -1.14
RTTN-215ENST00000639487 SPDYE6P0CI01 402 aa7.96□□□□□ -1.14
RTTN-215ENST00000639487 RLBP1P12271 317 aa7.96□□□□□ -1.14
RTTN-215ENST00000639487 SEMA3FQ13275 785 aa7.96□□□□□ -1.14
RTTN-215ENST00000639487 EVI5LQ96CN4 794 aa7.96□□□□□ -1.14
RTTN-215ENST00000639487 HMG20BQ9P0W2 317 aa7.96□□□□□ -1.14
RTTN-215ENST00000639487 STK36Q9NRP7 1315 aa7.96□□□□□ -1.14
RTTN-215ENST00000639487 CXCL11O14625 94 aa7.96□□□□□ -1.14
RTTN-215ENST00000639487 R3HDM1Q15032 1099 aaKnown RBP7.96□□□□□ -1.14
RTTN-215ENST00000639487 NSUN4Q96CB9 384 aaKnown RBP7.96□□□□□ -1.14
RTTN-215ENST00000639487 CHMP4CQ96CF2 233 aa7.96□□□□□ -1.14
RTTN-215ENST00000639487 TTC14Q96N46 770 aa7.96□□□□□ -1.14
RTTN-215ENST00000639487 C1RP00736 705 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms