RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 TESK2Q96S53 571 aa20.84■□□□□ 0.93
SCARB2-213ENST00000638680 CARD14Q9BXL6 1004 aa20.84■□□□□ 0.93
SCARB2-213ENST00000638680 FANCCQ00597 558 aa20.84■□□□□ 0.93
SCARB2-213ENST00000638680 SMC6Q96SB8 1091 aa20.84■□□□□ 0.93
SCARB2-213ENST00000638680 KDM5BQ9UGL1 1544 aa20.84■□□□□ 0.93
SCARB2-213ENST00000638680 PSMD1Q99460 953 aa20.84■□□□□ 0.93
SCARB2-213ENST00000638680 ZNF174Q15697 407 aa20.83■□□□□ 0.93
SCARB2-213ENST00000638680 CCDC63Q8NA47 563 aa20.83■□□□□ 0.93
SCARB2-213ENST00000638680 RRP36Q96EU6 259 aaKnown RBP20.83■□□□□ 0.93
SCARB2-213ENST00000638680 LMBRD1Q9NUN5 540 aa20.83■□□□□ 0.93
SCARB2-213ENST00000638680 MTRF1LQ9UGC7 380 aaKnown RBP20.83■□□□□ 0.93
SCARB2-213ENST00000638680 GRIN2AQ12879 1464 aa20.83■□□□□ 0.93
SCARB2-213ENST00000638680 GBP6Q6ZN66 633 aa20.83■□□□□ 0.93
SCARB2-213ENST00000638680 CEBPAP49715 358 aaPredicted RBP20.83■□□□□ 0.92
SCARB2-213ENST00000638680 VPS16Q9H269 839 aa20.83■□□□□ 0.92
SCARB2-213ENST00000638680 ZKSCAN3Q9BRR0 538 aa20.83■□□□□ 0.92
SCARB2-213ENST00000638680 HELLSQ9NRZ9 838 aa20.83■□□□□ 0.92
SCARB2-213ENST00000638680 TNNI2P48788 182 aa20.82■□□□□ 0.92
SCARB2-213ENST00000638680 PPP1R7Q15435 360 aa20.82■□□□□ 0.92
SCARB2-213ENST00000638680 PLCB3Q01970 1234 aa20.82■□□□□ 0.92
SCARB2-213ENST00000638680 PICALMQ13492 652 aa20.82■□□□□ 0.92
SCARB2-213ENST00000638680 FANCAO15360 1455 aa20.82■□□□□ 0.92
SCARB2-213ENST00000638680 UGGT2Q9NYU1 1516 aa20.82■□□□□ 0.92
SCARB2-213ENST00000638680 ANO1Q5XXA6 986 aa20.82■□□□□ 0.92
SCARB2-213ENST00000638680 EIF2AK4Q9P2K8 1649 aaKnown RBP20.82■□□□□ 0.92
SCARB2-213ENST00000638680 WDHD1O75717 1129 aaPredicted RBP20.82■□□□□ 0.92
SCARB2-213ENST00000638680 HPDP32754 393 aaPredicted RBP20.82■□□□□ 0.92
SCARB2-213ENST00000638680 NBPF6Q5VWK0 638 aa20.82■□□□□ 0.92
SCARB2-213ENST00000638680 NBPF5PQ86XG9 351 aaPredicted RBP20.82■□□□□ 0.92
SCARB2-213ENST00000638680 SMARCC2Q8TAQ2 1214 aa20.82■□□□□ 0.92
SCARB2-213ENST00000638680 NBPF4Q96M43 638 aa20.82■□□□□ 0.92
SCARB2-213ENST00000638680 TTF2Q9UNY4 1162 aaKnown RBP20.81■□□□□ 0.92
SCARB2-213ENST00000638680 FAM13AO94988 1023 aa20.81■□□□□ 0.92
SCARB2-213ENST00000638680 CYP26C1Q6V0L0 522 aa20.81■□□□□ 0.92
SCARB2-213ENST00000638680 NOC4LQ9BVI4 516 aaKnown RBP20.81■□□□□ 0.92
SCARB2-213ENST00000638680 RAPGEF1Q13905 1077 aa20.81■□□□□ 0.92
SCARB2-213ENST00000638680 KCNH3Q9ULD8 1083 aa20.81■□□□□ 0.92
SCARB2-213ENST00000638680 G2E3Q7L622 706 aa20.8■□□□□ 0.92
SCARB2-213ENST00000638680 MAP3K5Q99683 1374 aa20.8■□□□□ 0.92
SCARB2-213ENST00000638680 ZMYM4Q5VZL5 1548 aa20.8■□□□□ 0.92
SCARB2-213ENST00000638680 SETDB1Q15047 1291 aa20.8■□□□□ 0.92
SCARB2-213ENST00000638680 LEO1Q8WVC0 666 aaPredicted RBP20.8■□□□□ 0.92
SCARB2-213ENST00000638680 PUS7Q96PZ0 661 aaKnown RBP20.8■□□□□ 0.92
SCARB2-213ENST00000638680 RSRC1Q96IZ7 334 aaKnown RBP20.8■□□□□ 0.92
SCARB2-213ENST00000638680 ATP6V0A2Q9Y487 856 aa20.8■□□□□ 0.92
SCARB2-213ENST00000638680 GABPB1Q06547 395 aaPredicted RBP20.8■□□□□ 0.92
SCARB2-213ENST00000638680 F8W031 263 aaPredicted RBP20.79■□□□□ 0.92
SCARB2-213ENST00000638680 HMGB2P26583 209 aaKnown RBP20.79■□□□□ 0.92
SCARB2-213ENST00000638680 APBB1IPQ7Z5R6 666 aaPredicted RBP20.79■□□□□ 0.92
SCARB2-213ENST00000638680 HELBQ8NG08 1087 aaPredicted RBP20.79■□□□□ 0.92
SCARB2-213ENST00000638680 ZCRB1Q8TBF4 217 aaKnown RBP20.79■□□□□ 0.92
SCARB2-213ENST00000638680 SEC62Q99442 399 aaKnown RBP20.79■□□□□ 0.92
SCARB2-213ENST00000638680 NCOA5Q9HCD5 579 aaKnown RBP20.79■□□□□ 0.92
SCARB2-213ENST00000638680 TRIM14Q14142 442 aa20.79■□□□□ 0.92
SCARB2-213ENST00000638680 TUBB2AQ13885 445 aa20.79■□□□□ 0.92
SCARB2-213ENST00000638680 B4GALNT4Q76KP1 1039 aa20.79■□□□□ 0.92
SCARB2-213ENST00000638680 TUBB2BQ9BVA1 445 aa20.79■□□□□ 0.92
SCARB2-213ENST00000638680 RBM28Q9NW13 759 aaKnown RBP20.79■□□□□ 0.92
SCARB2-213ENST00000638680 MCM9Q9NXL9 1143 aa20.79■□□□□ 0.92
SCARB2-213ENST00000638680 IMPACTQ9P2X3 320 aa20.79■□□□□ 0.92
SCARB2-213ENST00000638680 CALCOCO2Q13137 446 aa20.79■□□□□ 0.92
SCARB2-213ENST00000638680 DCAF17Q5H9S7 520 aaPredicted RBP20.79■□□□□ 0.92
SCARB2-213ENST00000638680 TBC1D8BQ0IIM8 1120 aa20.78■□□□□ 0.92
SCARB2-213ENST00000638680 C8orf74Q6P047 294 aa20.78■□□□□ 0.92
SCARB2-213ENST00000638680 LRRC59Q96AG4 307 aaKnown RBP20.78■□□□□ 0.92
SCARB2-213ENST00000638680 DTNBO60941 627 aa20.78■□□□□ 0.92
SCARB2-213ENST00000638680 NDUFAB1O14561 156 aa20.78■□□□□ 0.92
SCARB2-213ENST00000638680 CCDC26Q8TAB7 109 aa20.78■□□□□ 0.92
SCARB2-213ENST00000638680 JAKMIP2Q96AA8 810 aa20.78■□□□□ 0.92
SCARB2-213ENST00000638680 LLPHQ9BRT6 129 aaKnown RBP20.78■□□□□ 0.92
SCARB2-213ENST00000638680 GOLGA6CA6NDK9 693 aa20.77■□□□□ 0.92
SCARB2-213ENST00000638680 VIMP08670 466 aaKnown RBP20.77■□□□□ 0.92
SCARB2-213ENST00000638680 GOLGA6DP0CG33 693 aa20.77■□□□□ 0.92
SCARB2-213ENST00000638680 NLRP12P59046 1061 aa20.77■□□□□ 0.92
SCARB2-213ENST00000638680 RILPL1Q5EBL4 403 aa20.77■□□□□ 0.92
SCARB2-213ENST00000638680 GOLGA6AQ9NYA3 693 aa20.77■□□□□ 0.92
SCARB2-213ENST00000638680 SYNRGQ9UMZ2 1314 aa20.77■□□□□ 0.92
SCARB2-213ENST00000638680 NAA25Q14CX7 972 aa20.77■□□□□ 0.92
SCARB2-213ENST00000638680 GNA11P29992 359 aa20.77■□□□□ 0.92
SCARB2-213ENST00000638680 CEP83Q9Y592 693 aa20.77■□□□□ 0.92
SCARB2-213ENST00000638680 ZFYVE9O95405 1425 aa20.77■□□□□ 0.92
SCARB2-213ENST00000638680 LACTBP83111 547 aaPredicted RBP20.77■□□□□ 0.92
SCARB2-213ENST00000638680 PLS1Q14651 629 aa20.77■□□□□ 0.92
SCARB2-213ENST00000638680 UTP14CQ5TAP6 766 aaKnown RBP20.77■□□□□ 0.92
SCARB2-213ENST00000638680 HS2ST1Q7LGA3 356 aa20.77■□□□□ 0.92
SCARB2-213ENST00000638680 NFATC2IPQ8NCF5 419 aa20.77■□□□□ 0.92
SCARB2-213ENST00000638680 RABEP2Q9H5N1 569 aa20.77■□□□□ 0.92
SCARB2-213ENST00000638680 MTUS1Q9ULD2 1270 aa20.77■□□□□ 0.92
SCARB2-213ENST00000638680 RNASE9P60153 205 aaKnown RBP20.77■□□□□ 0.91
SCARB2-213ENST00000638680 SV2BQ7L1I2 683 aa20.77■□□□□ 0.91
SCARB2-213ENST00000638680 CDC37L1Q7L3B6 337 aa20.77■□□□□ 0.91
SCARB2-213ENST00000638680 DAAM2Q86T65 1068 aa20.77■□□□□ 0.91
SCARB2-213ENST00000638680 TMEM63CQ9P1W3 806 aa20.77■□□□□ 0.91
SCARB2-213ENST00000638680 FLT4P35916 1363 aa20.77■□□□□ 0.91
SCARB2-213ENST00000638680 FAM227BQ96M60 508 aa20.76■□□□□ 0.91
SCARB2-213ENST00000638680 SPDYE3A6NKU9 549 aa20.76■□□□□ 0.91
SCARB2-213ENST00000638680 B4E1Z4 1266 aa20.76■□□□□ 0.91
SCARB2-213ENST00000638680 PER1O15534 1290 aaPredicted RBP20.76■□□□□ 0.91
SCARB2-213ENST00000638680 RFC4P35249 363 aa20.76■□□□□ 0.91
SCARB2-213ENST00000638680 SEL1L2Q5TEA6 688 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms