RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 SH2D4BQ5SQS7 431 aa19.14■□□□□ 0.65
CACNA1A-253ENST00000637927 NSFL1CQ9UNZ2 370 aaKnown RBP19.14■□□□□ 0.65
CACNA1A-253ENST00000637927 PARP3Q9Y6F1 533 aa19.14■□□□□ 0.65
CACNA1A-253ENST00000637927 CASP2P42575 452 aa19.14■□□□□ 0.65
CACNA1A-253ENST00000637927 CCDC122Q5T0U0 273 aa19.14■□□□□ 0.65
CACNA1A-253ENST00000637927 TRIM31Q9BZY9 425 aa19.14■□□□□ 0.65
CACNA1A-253ENST00000637927 SEPT10Q9P0V9 454 aa19.14■□□□□ 0.65
CACNA1A-253ENST00000637927 HPDP32754 393 aaPredicted RBP19.13■□□□□ 0.65
CACNA1A-253ENST00000637927 LONRF3Q496Y0 759 aa19.13■□□□□ 0.65
CACNA1A-253ENST00000637927 KIF9Q9HAQ2 790 aa19.13■□□□□ 0.65
CACNA1A-253ENST00000637927 RASAL2Q9UJF2 1139 aa19.13■□□□□ 0.65
CACNA1A-253ENST00000637927 DZIP3Q86Y13 1208 aaKnown RBP19.13■□□□□ 0.65
CACNA1A-253ENST00000637927 PRPF38AQ8NAV1 312 aaKnown RBP19.13■□□□□ 0.65
CACNA1A-253ENST00000637927 SELENOOQ9BVL4 669 aa19.13■□□□□ 0.65
CACNA1A-253ENST00000637927 LZTFL1Q9NQ48 299 aa19.13■□□□□ 0.65
CACNA1A-253ENST00000637927 GUCA1BQ9UMX6 200 aa19.13■□□□□ 0.65
CACNA1A-253ENST00000637927 MCM3P25205 808 aa19.13■□□□□ 0.65
CACNA1A-253ENST00000637927 TCP10Q12799 353 aa19.13■□□□□ 0.65
CACNA1A-253ENST00000637927 CCDC102BQ68D86 513 aa19.13■□□□□ 0.65
CACNA1A-253ENST00000637927 ADGRL1O94910 1474 aa19.13■□□□□ 0.65
CACNA1A-253ENST00000637927 LRPPRCP42704 1394 aaKnown RBP19.13■□□□□ 0.65
CACNA1A-253ENST00000637927 SWAP70Q9UH65 585 aa19.13■□□□□ 0.65
CACNA1A-253ENST00000637927 SYNDIG1LA6NDD5 238 aa19.12■□□□□ 0.65
CACNA1A-253ENST00000637927 POLD1P28340 1107 aa19.12■□□□□ 0.65
CACNA1A-253ENST00000637927 ZSCAN30Q86W11 494 aa19.12■□□□□ 0.65
CACNA1A-253ENST00000637927 DDX27Q96GQ7 796 aaKnown RBP19.12■□□□□ 0.65
CACNA1A-253ENST00000637927 MAPK8IP1Q9UQF2 711 aa19.12■□□□□ 0.65
CACNA1A-253ENST00000637927 KIF14Q15058 1648 aa19.12■□□□□ 0.65
CACNA1A-253ENST00000637927 CCDC110Q8TBZ0 833 aa19.12■□□□□ 0.65
CACNA1A-253ENST00000637927 TTC22Q5TAA0 569 aa19.12■□□□□ 0.65
CACNA1A-253ENST00000637927 ZNF804AQ7Z570 1209 aa19.12■□□□□ 0.65
CACNA1A-253ENST00000637927 LMBR1LQ6UX01 489 aa19.12■□□□□ 0.65
CACNA1A-253ENST00000637927 MCM9Q9NXL9 1143 aa19.12■□□□□ 0.65
CACNA1A-253ENST00000637927 CTAGE5O15320 804 aa19.12■□□□□ 0.65
CACNA1A-253ENST00000637927 TBC1D31Q96DN5 1066 aa19.12■□□□□ 0.65
CACNA1A-253ENST00000637927 CACYBPQ9HB71 228 aaKnown RBP19.12■□□□□ 0.65
CACNA1A-253ENST00000637927 PIK3R4Q99570 1358 aa19.12■□□□□ 0.65
CACNA1A-253ENST00000637927 PTPN23Q9H3S7 1636 aa19.12■□□□□ 0.65
CACNA1A-253ENST00000637927 LEO1Q8WVC0 666 aaPredicted RBP19.11■□□□□ 0.65
CACNA1A-253ENST00000637927 DDX17Q92841 729 aaKnown RBP19.11■□□□□ 0.65
CACNA1A-253ENST00000637927 NLRP3Q96P20 1036 aa19.11■□□□□ 0.65
CACNA1A-253ENST00000637927 HCLS1P14317 486 aaPredicted RBP19.11■□□□□ 0.65
CACNA1A-253ENST00000637927 NFATC2IPQ8NCF5 419 aa19.11■□□□□ 0.65
CACNA1A-253ENST00000637927 MED10Q9BTT4 135 aa19.11■□□□□ 0.65
CACNA1A-253ENST00000637927 GTF2A1P52655 376 aaPredicted RBP19.11■□□□□ 0.65
CACNA1A-253ENST00000637927 UBXN1Q04323 297 aa19.11■□□□□ 0.65
CACNA1A-253ENST00000637927 MKRN3Q13064 507 aaKnown RBP19.11■□□□□ 0.65
CACNA1A-253ENST00000637927 SLC9A5Q14940 896 aa19.11■□□□□ 0.65
CACNA1A-253ENST00000637927 ITM2BQ9Y287 266 aa19.11■□□□□ 0.65
CACNA1A-253ENST00000637927 TIAM1Q13009 1591 aa19.11■□□□□ 0.65
CACNA1A-253ENST00000637927 GKAP1Q5VSY0 366 aaPredicted RBP19.11■□□□□ 0.65
CACNA1A-253ENST00000637927 AOPEPQ8N6M6 819 aa19.11■□□□□ 0.65
CACNA1A-253ENST00000637927 ZNF131P52739 623 aa19.1■□□□□ 0.65
CACNA1A-253ENST00000637927 APOBRQ0VD83 1088 aa19.1■□□□□ 0.65
CACNA1A-253ENST00000637927 WDR46O15213 610 aaKnown RBP19.1■□□□□ 0.65
CACNA1A-253ENST00000637927 ERMNQ8TAM6 284 aa19.1■□□□□ 0.65
CACNA1A-253ENST00000637927 JDP2Q8WYK2 163 aa19.1■□□□□ 0.65
CACNA1A-253ENST00000637927 OLA1Q9NTK5 396 aaKnown RBP19.1■□□□□ 0.65
CACNA1A-253ENST00000637927 RBM8AQ9Y5S9 174 aaKnown RBP19.1■□□□□ 0.65
CACNA1A-253ENST00000637927 IFT140Q96RY7 1462 aa19.1■□□□□ 0.65
CACNA1A-253ENST00000637927 ZBTB24O43167 697 aaPredicted RBP19.1■□□□□ 0.65
CACNA1A-253ENST00000637927 ZNF165P49910 485 aa19.1■□□□□ 0.65
CACNA1A-253ENST00000637927 NMIQ13287 307 aaPredicted RBP19.1■□□□□ 0.65
CACNA1A-253ENST00000637927 CCT6AP40227 531 aaKnown RBP19.1■□□□□ 0.65
CACNA1A-253ENST00000637927 CWF19L2Q2TBE0 894 aaKnown RBP19.1■□□□□ 0.65
CACNA1A-253ENST00000637927 ZSCAN23Q3MJ62 389 aa19.1■□□□□ 0.65
CACNA1A-253ENST00000637927 PPP1R12CQ9BZL4 782 aa19.1■□□□□ 0.65
CACNA1A-253ENST00000637927 TTC12Q9H892 705 aaPredicted RBP19.1■□□□□ 0.65
CACNA1A-253ENST00000637927 NOP56O00567 594 aaKnown RBP19.1■□□□□ 0.65
CACNA1A-253ENST00000637927 PDCD7Q8N8D1 485 aaKnown RBP19.1■□□□□ 0.65
CACNA1A-253ENST00000637927 C6orf50Q9HD87 102 aa19.1■□□□□ 0.65
CACNA1A-253ENST00000637927 VPS18Q9P253 973 aa19.1■□□□□ 0.65
CACNA1A-253ENST00000637927 Q3C1V9 767 aa19.09■□□□□ 0.65
CACNA1A-253ENST00000637927 MGARPQ8TDB4 240 aa19.09■□□□□ 0.65
CACNA1A-253ENST00000637927 KRT23Q9C075 422 aa19.09■□□□□ 0.65
CACNA1A-253ENST00000637927 FAM204AQ9H8W3 233 aa19.09■□□□□ 0.65
CACNA1A-253ENST00000637927 SDSP20132 328 aa19.09■□□□□ 0.65
CACNA1A-253ENST00000637927 RHPN1Q8TCX5 695 aa19.09■□□□□ 0.65
CACNA1A-253ENST00000637927 PCF11O94913 1555 aaKnown RBP19.09■□□□□ 0.65
CACNA1A-253ENST00000637927 SLC12A1Q13621 1099 aa19.09■□□□□ 0.65
CACNA1A-253ENST00000637927 DDB1Q16531 1140 aa19.09■□□□□ 0.65
CACNA1A-253ENST00000637927 METTL13Q8N6R0 699 aa19.09■□□□□ 0.65
CACNA1A-253ENST00000637927 TEX13AQ9BXU3 409 aaPredicted RBP19.09■□□□□ 0.65
CACNA1A-253ENST00000637927 ZNF513Q8N8E2 541 aaPredicted RBP19.08■□□□□ 0.65
CACNA1A-253ENST00000637927 CAPN12Q6ZSI9 719 aa19.08■□□□□ 0.65
CACNA1A-253ENST00000637927 CPXCR1Q8N123 301 aa19.08■□□□□ 0.65
CACNA1A-253ENST00000637927 MIPOL1Q8TD10 442 aa19.08■□□□□ 0.65
CACNA1A-253ENST00000637927 UQCRFS1P1P0C7P4 283 aa19.08■□□□□ 0.64
CACNA1A-253ENST00000637927 BRD3Q15059 726 aa19.08■□□□□ 0.64
CACNA1A-253ENST00000637927 FNBP1Q96RU3 617 aa19.08■□□□□ 0.64
CACNA1A-253ENST00000637927 DDX19AQ9NUU7 478 aaKnown RBP19.08■□□□□ 0.64
CACNA1A-253ENST00000637927 DNAI1Q9UI46 699 aa19.08■□□□□ 0.64
CACNA1A-253ENST00000637927 DISP3Q9P2K9 1392 aa19.08■□□□□ 0.64
CACNA1A-253ENST00000637927 PSMB7Q99436 277 aa19.08■□□□□ 0.64
CACNA1A-253ENST00000637927 NSRP1Q9H0G5 558 aaKnown RBP19.08■□□□□ 0.64
CACNA1A-253ENST00000637927 ESR2Q92731 530 aa19.08■□□□□ 0.64
CACNA1A-253ENST00000637927 MSH6P52701 1360 aa19.07■□□□□ 0.64
CACNA1A-253ENST00000637927 TFCP2Q12800 502 aa19.07■□□□□ 0.64
CACNA1A-253ENST00000637927 NXNQ6DKJ4 435 aa19.07■□□□□ 0.64
CACNA1A-253ENST00000637927 USP48Q86UV5 1035 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms