RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 EN2P19622 333 aaPredicted RBP19.8■□□□□ 0.76
PDLIM3-213ENST00000629667 DZIP1LQ8IYY4 767 aaKnown RBP19.8■□□□□ 0.76
PDLIM3-213ENST00000629667 MS4A4AQ96JQ5 239 aa19.8■□□□□ 0.76
PDLIM3-213ENST00000629667 TMEM106CQ9BVX2 250 aa19.8■□□□□ 0.76
PDLIM3-213ENST00000629667 GTF2A2P52657 109 aa19.79■□□□□ 0.76
PDLIM3-213ENST00000629667 TAF1CQ15572 869 aaPredicted RBP19.79■□□□□ 0.76
PDLIM3-213ENST00000629667 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.79■□□□□ 0.76
PDLIM3-213ENST00000629667 WDR63Q8IWG1 891 aa19.79■□□□□ 0.76
PDLIM3-213ENST00000629667 FAM84BQ96KN1 310 aaPredicted RBP19.79■□□□□ 0.76
PDLIM3-213ENST00000629667 TEPSINQ96N21 525 aa19.79■□□□□ 0.76
PDLIM3-213ENST00000629667 ZFYVE28Q9HCC9 887 aa19.79■□□□□ 0.76
PDLIM3-213ENST00000629667 CSADQ9Y600 493 aa19.79■□□□□ 0.76
PDLIM3-213ENST00000629667 CCL15-CCL14A0A0B4J2E2 113 aa19.78■□□□□ 0.76
PDLIM3-213ENST00000629667 CRKP46108 304 aa19.78■□□□□ 0.76
PDLIM3-213ENST00000629667 MAP3K9P80192 1104 aa19.78■□□□□ 0.76
PDLIM3-213ENST00000629667 CAP1Q01518 475 aa19.78■□□□□ 0.76
PDLIM3-213ENST00000629667 VGLL4Q14135 290 aa19.78■□□□□ 0.76
PDLIM3-213ENST00000629667 CCL15Q16663 113 aa19.78■□□□□ 0.76
PDLIM3-213ENST00000629667 NBPF11Q86T75 865 aa19.78■□□□□ 0.76
PDLIM3-213ENST00000629667 CDAN1Q8IWY9 1227 aa19.78■□□□□ 0.76
PDLIM3-213ENST00000629667 CNKSR2Q8WXI2 1034 aa19.78■□□□□ 0.76
PDLIM3-213ENST00000629667 BRI3BPQ8WY22 251 aa19.78■□□□□ 0.76
PDLIM3-213ENST00000629667 TMEM39BQ9GZU3 492 aa19.78■□□□□ 0.76
PDLIM3-213ENST00000629667 SLC9C1Q4G0N8 1177 aa19.77■□□□□ 0.76
PDLIM3-213ENST00000629667 SLC4A10Q6U841 1118 aa19.77■□□□□ 0.76
PDLIM3-213ENST00000629667 VPS37DQ86XT2 251 aa19.77■□□□□ 0.76
PDLIM3-213ENST00000629667 OTUD5Q96G74 571 aa19.77■□□□□ 0.76
PDLIM3-213ENST00000629667 WDHD1O75717 1129 aaPredicted RBP19.76■□□□□ 0.75
PDLIM3-213ENST00000629667 ALDH1L1O75891 902 aa19.76■□□□□ 0.75
PDLIM3-213ENST00000629667 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.76■□□□□ 0.75
PDLIM3-213ENST00000629667 ZNF333Q96JL9 665 aa19.76■□□□□ 0.75
PDLIM3-213ENST00000629667 PUS3Q9BZE2 481 aaKnown RBP19.76■□□□□ 0.75
PDLIM3-213ENST00000629667 FRAT2O75474 233 aaPredicted RBP19.75■□□□□ 0.75
PDLIM3-213ENST00000629667 FAM43AQ8N2R8 423 aa19.75■□□□□ 0.75
PDLIM3-213ENST00000629667 SRCIN1Q9C0H9 1055 aa19.75■□□□□ 0.75
PDLIM3-213ENST00000629667 PTCH2Q9Y6C5 1203 aa19.75■□□□□ 0.75
PDLIM3-213ENST00000629667 MROH5Q6ZUA9 1318 aa19.75■□□□□ 0.75
PDLIM3-213ENST00000629667 CHAF1AQ13111 956 aaPredicted RBP19.74■□□□□ 0.75
PDLIM3-213ENST00000629667 SLC4A8Q2Y0W8 1093 aa19.74■□□□□ 0.75
PDLIM3-213ENST00000629667 MRS2Q9HD23 443 aa19.74■□□□□ 0.75
PDLIM3-213ENST00000629667 IQSEC3Q9UPP2 1182 aaPredicted RBP19.74■□□□□ 0.75
PDLIM3-213ENST00000629667 HDLBPQ00341 1268 aaKnown RBP19.73■□□□□ 0.75
PDLIM3-213ENST00000629667 GRIK5Q16478 980 aa19.73■□□□□ 0.75
PDLIM3-213ENST00000629667 CAVIN4Q5BKX8 364 aa19.73■□□□□ 0.75
PDLIM3-213ENST00000629667 TBC1D22AQ8WUA7 517 aa19.73■□□□□ 0.75
PDLIM3-213ENST00000629667 TEKT1Q969V4 418 aa19.73■□□□□ 0.75
PDLIM3-213ENST00000629667 SUCLG2Q96I99 432 aa19.73■□□□□ 0.75
PDLIM3-213ENST00000629667 RIPOR2Q9Y4F9 1068 aa19.73■□□□□ 0.75
PDLIM3-213ENST00000629667 SPDYE5A6NIY4 337 aa19.72■□□□□ 0.75
PDLIM3-213ENST00000629667 CETPP11597 493 aa19.72■□□□□ 0.75
PDLIM3-213ENST00000629667 CACNB3P54284 484 aa19.72■□□□□ 0.75
PDLIM3-213ENST00000629667 KIF22Q14807 665 aa19.72■□□□□ 0.75
PDLIM3-213ENST00000629667 FBXO33Q7Z6M2 555 aa19.72■□□□□ 0.75
PDLIM3-213ENST00000629667 TMOD2Q9NZR1 351 aa19.72■□□□□ 0.75
PDLIM3-213ENST00000629667 MYCP01106 439 aaPredicted RBP19.71■□□□□ 0.75
PDLIM3-213ENST00000629667 ERO1BQ86YB8 467 aa19.71■□□□□ 0.75
PDLIM3-213ENST00000629667 HOOK2Q96ED9 719 aa19.71■□□□□ 0.75
PDLIM3-213ENST00000629667 KAZALD1Q96I82 304 aa19.71■□□□□ 0.75
PDLIM3-213ENST00000629667 WRNIP1Q96S55 665 aa19.71■□□□□ 0.75
PDLIM3-213ENST00000629667 ZSWIM8A7E2V4 1837 aa19.71■□□□□ 0.75
PDLIM3-213ENST00000629667 TLR2O60603 784 aa19.7■□□□□ 0.74
PDLIM3-213ENST00000629667 NBPF7P0C2Y1 421 aaPredicted RBP19.7■□□□□ 0.74
PDLIM3-213ENST00000629667 METTL24Q5JXM2 366 aa19.7■□□□□ 0.74
PDLIM3-213ENST00000629667 ZCCHC17Q9NP64 241 aaKnown RBP19.7■□□□□ 0.74
PDLIM3-213ENST00000629667 SPINK5Q9NQ38 1064 aaPredicted RBP19.7■□□□□ 0.74
PDLIM3-213ENST00000629667 SNCAIPQ9Y6H5 919 aa19.7■□□□□ 0.74
PDLIM3-213ENST00000629667 LACTBP83111 547 aaPredicted RBP19.69■□□□□ 0.74
PDLIM3-213ENST00000629667 SNAPC2Q13487 334 aa19.69■□□□□ 0.74
PDLIM3-213ENST00000629667 LRRC24Q50LG9 513 aa19.69■□□□□ 0.74
PDLIM3-213ENST00000629667 FAM83AQ86UY5 434 aa19.69■□□□□ 0.74
PDLIM3-213ENST00000629667 ZKSCAN4Q969J2 545 aaPredicted RBP19.69■□□□□ 0.74
PDLIM3-213ENST00000629667 ZDHHC15Q96MV8 337 aa19.69■□□□□ 0.74
PDLIM3-213ENST00000629667 BICC1Q9H694 974 aaKnown RBP19.69■□□□□ 0.74
PDLIM3-213ENST00000629667 MYH13Q9UKX3 1938 aa19.68■□□□□ 0.74
PDLIM3-213ENST00000629667 BTBD19C9JJ37 291 aa19.68■□□□□ 0.74
PDLIM3-213ENST00000629667 IRF6O14896 467 aa19.68■□□□□ 0.74
PDLIM3-213ENST00000629667 PDE8BO95263 885 aa19.68■□□□□ 0.74
PDLIM3-213ENST00000629667 SH3TC2Q8TF17 1288 aa19.68■□□□□ 0.74
PDLIM3-213ENST00000629667 MRIQ9BWK5 157 aa19.68■□□□□ 0.74
PDLIM3-213ENST00000629667 ARHGAP39Q9C0H5 1083 aa19.68■□□□□ 0.74
PDLIM3-213ENST00000629667 MAST3O60307 1309 aa19.68■□□□□ 0.74
PDLIM3-213ENST00000629667 AK9Q5TCS8 1911 aa19.68■□□□□ 0.74
PDLIM3-213ENST00000629667 GNRH1P01148 92 aa19.67■□□□□ 0.74
PDLIM3-213ENST00000629667 FXR1P51114 621 aaKnown RBP eCLIP19.67■□□□□ 0.74
PDLIM3-213ENST00000629667 PPIL2Q13356 520 aa19.67■□□□□ 0.74
PDLIM3-213ENST00000629667 FKBP1CQ5VVH2 108 aa19.67■□□□□ 0.74
PDLIM3-213ENST00000629667 DCAF15Q66K64 600 aa19.67■□□□□ 0.74
PDLIM3-213ENST00000629667 UTYO14607 1347 aa19.67■□□□□ 0.74
PDLIM3-213ENST00000629667 BCAMP50895 628 aa19.66■□□□□ 0.74
PDLIM3-213ENST00000629667 RABL6Q3YEC7 729 aaPredicted RBP19.66■□□□□ 0.74
PDLIM3-213ENST00000629667 APOBEC3HQ6NTF7 200 aaKnown RBP19.66■□□□□ 0.74
PDLIM3-213ENST00000629667 COLQQ9Y215 455 aaPredicted RBP19.66■□□□□ 0.74
PDLIM3-213ENST00000629667 SUGT1Q9Y2Z0 365 aa19.66■□□□□ 0.74
PDLIM3-213ENST00000629667 ECM2O94769 699 aaPredicted RBP19.65■□□□□ 0.74
PDLIM3-213ENST00000629667 PRMT2P55345 433 aa19.65■□□□□ 0.74
PDLIM3-213ENST00000629667 VGLL2Q8N8G2 317 aa19.65■□□□□ 0.74
PDLIM3-213ENST00000629667 ZNF341Q9BYN7 854 aa19.65■□□□□ 0.74
PDLIM3-213ENST00000629667 IFIT1P09914 478 aaKnown RBP19.64■□□□□ 0.73
PDLIM3-213ENST00000629667 PPATQ06203 517 aa19.64■□□□□ 0.73
PDLIM3-213ENST00000629667 HHIPL2Q6UWX4 724 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms