RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 CAVIN4Q5BKX8 364 aa23.86■■□□□ 1.41
SMN2-215ENST00000628696 FBXO33Q7Z6M2 555 aa23.86■■□□□ 1.41
SMN2-215ENST00000628696 CDAN1Q8IWY9 1227 aa23.86■■□□□ 1.41
SMN2-215ENST00000628696 ARAP2Q8WZ64 1704 aa23.86■■□□□ 1.41
SMN2-215ENST00000628696 OTOFQ9HC10 1997 aa23.85■■□□□ 1.41
SMN2-215ENST00000628696 TNNI2P48788 182 aa23.85■■□□□ 1.41
SMN2-215ENST00000628696 CRHR2Q13324 411 aa23.85■■□□□ 1.41
SMN2-215ENST00000628696 GRIK5Q16478 980 aa23.85■■□□□ 1.41
SMN2-215ENST00000628696 RABL6Q3YEC7 729 aaPredicted RBP23.85■■□□□ 1.41
SMN2-215ENST00000628696 ANKRD44Q8N8A2 993 aa23.85■■□□□ 1.41
SMN2-215ENST00000628696 OPTNQ96CV9 577 aa23.85■■□□□ 1.41
SMN2-215ENST00000628696 TMEM39BQ9GZU3 492 aa23.85■■□□□ 1.41
SMN2-215ENST00000628696 LAMB1P07942 1786 aa23.85■■□□□ 1.41
SMN2-215ENST00000628696 OTOP1Q7RTM1 612 aa23.84■■□□□ 1.41
SMN2-215ENST00000628696 KLHDC4Q8TBB5 520 aa23.84■■□□□ 1.41
SMN2-215ENST00000628696 TEPSINQ96N21 525 aa23.84■■□□□ 1.41
SMN2-215ENST00000628696 CD99L2Q8TCZ2 262 aa23.83■■□□□ 1.41
SMN2-215ENST00000628696 TBC1D22AQ8WUA7 517 aa23.83■■□□□ 1.41
SMN2-215ENST00000628696 ERO1AQ96HE7 468 aa23.83■■□□□ 1.41
SMN2-215ENST00000628696 PTPN18Q99952 460 aa23.83■■□□□ 1.41
SMN2-215ENST00000628696 ZNF521Q96K83 1311 aa23.83■■□□□ 1.4
SMN2-215ENST00000628696 PDE8BO95263 885 aa23.82■■□□□ 1.4
SMN2-215ENST00000628696 BCAMP50895 628 aa23.82■■□□□ 1.4
SMN2-215ENST00000628696 PRPF38BQ5VTL8 546 aaKnown RBP23.82■■□□□ 1.4
SMN2-215ENST00000628696 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.82■■□□□ 1.4
SMN2-215ENST00000628696 TESPA1A2RU30 521 aaPredicted RBP23.81■■□□□ 1.4
SMN2-215ENST00000628696 CACNB3P54284 484 aa23.81■■□□□ 1.4
SMN2-215ENST00000628696 MAP3K9P80192 1104 aa23.81■■□□□ 1.4
SMN2-215ENST00000628696 CNKSR2Q8WXI2 1034 aa23.81■■□□□ 1.4
SMN2-215ENST00000628696 TEKT1Q969V4 418 aa23.81■■□□□ 1.4
SMN2-215ENST00000628696 PTPRCP08575 1304 aa23.81■■□□□ 1.4
SMN2-215ENST00000628696 HDLBPQ00341 1268 aaKnown RBP23.8■■□□□ 1.4
SMN2-215ENST00000628696 VGLL2Q8N8G2 317 aa23.8■■□□□ 1.4
SMN2-215ENST00000628696 SSH1Q8WYL5 1049 aa23.8■■□□□ 1.4
SMN2-215ENST00000628696 CSADQ9Y600 493 aa23.8■■□□□ 1.4
SMN2-215ENST00000628696 SP3Q02447 781 aa23.79■■□□□ 1.4
SMN2-215ENST00000628696 VGLL4Q14135 290 aa23.79■■□□□ 1.4
SMN2-215ENST00000628696 MS4A4AQ96JQ5 239 aa23.79■■□□□ 1.4
SMN2-215ENST00000628696 USP44Q9H0E7 712 aa23.79■■□□□ 1.4
SMN2-215ENST00000628696 EFCC1Q9HA90 598 aa23.79■■□□□ 1.4
SMN2-215ENST00000628696 CCL15-CCL14A0A0B4J2E2 113 aa23.78■■□□□ 1.4
SMN2-215ENST00000628696 E9PSI1 815 aa23.78■■□□□ 1.4
SMN2-215ENST00000628696 IFIT1P09914 478 aaKnown RBP23.78■■□□□ 1.4
SMN2-215ENST00000628696 CCL15Q16663 113 aa23.78■■□□□ 1.4
SMN2-215ENST00000628696 OTUD5Q96G74 571 aa23.78■■□□□ 1.4
SMN2-215ENST00000628696 TMOD2Q9NZR1 351 aa23.78■■□□□ 1.4
SMN2-215ENST00000628696 PTPN22Q9Y2R2 807 aa23.78■■□□□ 1.4
SMN2-215ENST00000628696 GTF2A2P52657 109 aa23.77■■□□□ 1.4
SMN2-215ENST00000628696 PUM3Q15397 648 aaKnown RBP23.77■■□□□ 1.4
SMN2-215ENST00000628696 INTS3Q68E01 1043 aaKnown RBP23.77■■□□□ 1.4
SMN2-215ENST00000628696 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.77■■□□□ 1.4
SMN2-215ENST00000628696 BRI3BPQ8WY22 251 aa23.77■■□□□ 1.4
SMN2-215ENST00000628696 TAF1CQ15572 869 aaPredicted RBP23.76■■□□□ 1.39
SMN2-215ENST00000628696 ZDHHC15Q96MV8 337 aa23.76■■□□□ 1.39
SMN2-215ENST00000628696 MYH13Q9UKX3 1938 aa23.75■■□□□ 1.39
SMN2-215ENST00000628696 ZFYVE28Q9HCC9 887 aa23.75■■□□□ 1.39
SMN2-215ENST00000628696 MAST3O60307 1309 aa23.75■■□□□ 1.39
SMN2-215ENST00000628696 KIAA0100Q14667 2235 aaKnown RBP23.74■■□□□ 1.39
SMN2-215ENST00000628696 POTEFA5A3E0 1075 aa23.74■■□□□ 1.39
SMN2-215ENST00000628696 EYA2O00167 538 aa23.74■■□□□ 1.39
SMN2-215ENST00000628696 SLC5A1P13866 664 aa23.74■■□□□ 1.39
SMN2-215ENST00000628696 FGFR2P21802 821 aa23.74■■□□□ 1.39
SMN2-215ENST00000628696 MRIQ9BWK5 157 aa23.74■■□□□ 1.39
SMN2-215ENST00000628696 AK9Q5TCS8 1911 aa23.73■■□□□ 1.39
SMN2-215ENST00000628696 CAP1Q01518 475 aa23.73■■□□□ 1.39
SMN2-215ENST00000628696 APOBEC3HQ6NTF7 200 aaKnown RBP23.73■■□□□ 1.39
SMN2-215ENST00000628696 FAM43AQ8N2R8 423 aa23.73■■□□□ 1.39
SMN2-215ENST00000628696 WRNIP1Q96S55 665 aa23.73■■□□□ 1.39
SMN2-215ENST00000628696 SUGT1Q9Y2Z0 365 aa23.73■■□□□ 1.39
SMN2-215ENST00000628696 SPDYE5A6NIY4 337 aa23.72■■□□□ 1.39
SMN2-215ENST00000628696 RFX5P48382 616 aaPredicted RBP23.72■■□□□ 1.39
SMN2-215ENST00000628696 SLFN5Q08AF3 891 aa23.72■■□□□ 1.39
SMN2-215ENST00000628696 HHIPL2Q6UWX4 724 aa23.72■■□□□ 1.39
SMN2-215ENST00000628696 FAM83AQ86UY5 434 aa23.72■■□□□ 1.39
SMN2-215ENST00000628696 ZKSCAN4Q969J2 545 aaPredicted RBP23.72■■□□□ 1.39
SMN2-215ENST00000628696 HOOK2Q96ED9 719 aa23.72■■□□□ 1.39
SMN2-215ENST00000628696 SNCAIPQ9Y6H5 919 aa23.72■■□□□ 1.39
SMN2-215ENST00000628696 KIF16BQ96L93 1317 aa23.71■■□□□ 1.39
SMN2-215ENST00000628696 ARHGEF6Q15052 776 aa23.71■■□□□ 1.39
SMN2-215ENST00000628696 ERO1BQ86YB8 467 aa23.71■■□□□ 1.39
SMN2-215ENST00000628696 WDR66Q8TBY9 1149 aa23.71■■□□□ 1.39
SMN2-215ENST00000628696 LPIN2Q92539 896 aa23.71■■□□□ 1.39
SMN2-215ENST00000628696 SMC4Q9NTJ3 1288 aa23.71■■□□□ 1.39
SMN2-215ENST00000628696 WDHD1O75717 1129 aaPredicted RBP23.7■■□□□ 1.38
SMN2-215ENST00000628696 CETPP11597 493 aa23.7■■□□□ 1.38
SMN2-215ENST00000628696 FKBP1CQ5VVH2 108 aa23.7■■□□□ 1.38
SMN2-215ENST00000628696 DCAF15Q66K64 600 aa23.7■■□□□ 1.38
SMN2-215ENST00000628696 MIGA2Q7L4E1 593 aa23.7■■□□□ 1.38
SMN2-215ENST00000628696 SIL1Q9H173 461 aa23.7■■□□□ 1.38
SMN2-215ENST00000628696 ALDH1L2Q3SY69 923 aa23.69■■□□□ 1.38
SMN2-215ENST00000628696 ARMC5Q96C12 935 aa23.69■■□□□ 1.38
SMN2-215ENST00000628696 CDCA7LQ96GN5 454 aa23.69■■□□□ 1.38
SMN2-215ENST00000628696 ATG9AQ7Z3C6 839 aa23.68■■□□□ 1.38
SMN2-215ENST00000628696 IRF6O14896 467 aa23.67■■□□□ 1.38
SMN2-215ENST00000628696 UBTFL1P0CB47 393 aaPredicted RBP23.67■■□□□ 1.38
SMN2-215ENST00000628696 EN2P19622 333 aaPredicted RBP23.67■■□□□ 1.38
SMN2-215ENST00000628696 TCP10Q12799 353 aa23.67■■□□□ 1.38
SMN2-215ENST00000628696 SNAPC2Q13487 334 aa23.67■■□□□ 1.38
SMN2-215ENST00000628696 TMEM106CQ9BVX2 250 aa23.67■■□□□ 1.38
SMN2-215ENST00000628696 ZNF341Q9BYN7 854 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms