RNA–Protein interactions for RNA: ENST00000626874.2

CHD2-208, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 1 (best) BASIC

Gene CHD2, Length 7,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-208	ENST00000626874	USP48	Q86UV5	1035 aa		7.76	□□□□□ -1.17
CHD2-208	ENST00000626874	TSHZ2	Q9NRE2	1034 aa		7.76	□□□□□ -1.17
CHD2-208	ENST00000626874	RPRD2	Q5VT52	1461 aa	Known RBP	7.76	□□□□□ -1.17
CHD2-208	ENST00000626874	ERCC5	P28715	1186 aa	Predicted RBP	7.76	□□□□□ -1.17
CHD2-208	ENST00000626874	CALCOCO2	Q13137	446 aa		7.76	□□□□□ -1.17
CHD2-208	ENST00000626874	HAUS8	Q9BT25	410 aa		7.76	□□□□□ -1.17
CHD2-208	ENST00000626874	CCDC129	Q6ZRS4	1044 aa		7.76	□□□□□ -1.17
CHD2-208	ENST00000626874	DZIP3	Q86Y13	1208 aa	Known RBP	7.76	□□□□□ -1.17
CHD2-208	ENST00000626874	ARFGAP2	Q8N6H7	521 aa		7.76	□□□□□ -1.17
CHD2-208	ENST00000626874	CALCOCO1	Q9P1Z2	691 aa		7.76	□□□□□ -1.17
CHD2-208	ENST00000626874	XRCC6	P12956	609 aa	Known RBP eCLIP	7.75	□□□□□ -1.17	2e-9	■■■■■ 28.3
CHD2-208	ENST00000626874	SRRT	Q9BXP5	876 aa	Known RBP	7.75	□□□□□ -1.17
CHD2-208	ENST00000626874	MCMDC2	Q4G0Z9	681 aa		7.75	□□□□□ -1.17
CHD2-208	ENST00000626874	AKAP4	Q5JQC9	854 aa		7.75	□□□□□ -1.17
CHD2-208	ENST00000626874	DPH6	Q7L8W6	267 aa		7.75	□□□□□ -1.17
CHD2-208	ENST00000626874	ABCD1	P33897	745 aa		7.75	□□□□□ -1.17
CHD2-208	ENST00000626874	UBE2H	P62256	183 aa		7.75	□□□□□ -1.17
CHD2-208	ENST00000626874	ITIH3	Q06033	890 aa		7.75	□□□□□ -1.17
CHD2-208	ENST00000626874	PPP2R5B	Q15173	497 aa		7.75	□□□□□ -1.17
CHD2-208	ENST00000626874	TTLL7	Q6ZT98	887 aa		7.75	□□□□□ -1.17
CHD2-208	ENST00000626874	PDZD4	Q76G19	769 aa	Predicted RBP	7.75	□□□□□ -1.17
CHD2-208	ENST00000626874	MCF2L2	Q86YR7	1114 aa		7.75	□□□□□ -1.17
CHD2-208	ENST00000626874	C19orf44	Q9H6X5	657 aa		7.75	□□□□□ -1.17
CHD2-208	ENST00000626874	MMRN2	Q9H8L6	949 aa		7.75	□□□□□ -1.17
CHD2-208	ENST00000626874	EIF2AK4	Q9P2K8	1649 aa	Known RBP	7.75	□□□□□ -1.17
CHD2-208	ENST00000626874	PLCD1	P51178	756 aa		7.75	□□□□□ -1.17
CHD2-208	ENST00000626874	SND1	Q7KZF4	910 aa	Known RBP eCLIP	7.75	□□□□□ -1.17
CHD2-208	ENST00000626874	OTUD6A	Q7L8S5	288 aa		7.75	□□□□□ -1.17
CHD2-208	ENST00000626874	ATP2A3	Q93084	1043 aa		7.75	□□□□□ -1.17
CHD2-208	ENST00000626874	GNPTAB	Q3T906	1256 aa		7.75	□□□□□ -1.17
CHD2-208	ENST00000626874	TMEM57	Q8N5G2	664 aa		7.75	□□□□□ -1.17
CHD2-208	ENST00000626874	CCDC26	Q8TAB7	109 aa		7.75	□□□□□ -1.17
CHD2-208	ENST00000626874	MCM9	Q9NXL9	1143 aa		7.75	□□□□□ -1.17
CHD2-208	ENST00000626874		A6NNZ2	444 aa		7.75	□□□□□ -1.17
CHD2-208	ENST00000626874	SETDB1	Q15047	1291 aa		7.75	□□□□□ -1.17
CHD2-208	ENST00000626874	TUBB8	Q3ZCM7	444 aa		7.75	□□□□□ -1.17
CHD2-208	ENST00000626874	EXOC8	Q8IYI6	725 aa		7.75	□□□□□ -1.17
CHD2-208	ENST00000626874	SIRT1	Q96EB6	747 aa		7.75	□□□□□ -1.17
CHD2-208	ENST00000626874	FAM193B	Q96PV7	902 aa	Predicted RBP	7.75	□□□□□ -1.17
CHD2-208	ENST00000626874	CCDC8	Q9H0W5	538 aa	Predicted RBP	7.75	□□□□□ -1.17
CHD2-208	ENST00000626874	VCX	Q9H320	206 aa		7.75	□□□□□ -1.17
CHD2-208	ENST00000626874	NSFL1C	Q9UNZ2	370 aa	Known RBP	7.75	□□□□□ -1.17
CHD2-208	ENST00000626874	GPR162	Q16538	588 aa		7.75	□□□□□ -1.17
CHD2-208	ENST00000626874	UVSSA	Q2YD98	709 aa		7.75	□□□□□ -1.17
CHD2-208	ENST00000626874	TRMT1L	Q7Z2T5	733 aa	Known RBP	7.75	□□□□□ -1.17
CHD2-208	ENST00000626874	ALG1	Q9BT22	464 aa		7.75	□□□□□ -1.17
CHD2-208	ENST00000626874	CTAGE9	A4FU28	777 aa		7.74	□□□□□ -1.17
CHD2-208	ENST00000626874	DNA2	P51530	1060 aa		7.74	□□□□□ -1.17
CHD2-208	ENST00000626874	PPP1R7	Q15435	360 aa		7.74	□□□□□ -1.17
CHD2-208	ENST00000626874	UBL4B	Q8N7F7	174 aa		7.74	□□□□□ -1.17
CHD2-208	ENST00000626874	HAUS1	Q96CS2	278 aa		7.74	□□□□□ -1.17
CHD2-208	ENST00000626874	IPO11	Q9UI26	975 aa	Known RBP	7.74	□□□□□ -1.17
CHD2-208	ENST00000626874	TIAM1	Q13009	1591 aa		7.74	□□□□□ -1.17
CHD2-208	ENST00000626874	OAT	P04181	439 aa		7.74	□□□□□ -1.17
CHD2-208	ENST00000626874	MSL1	Q68DK7	614 aa		7.74	□□□□□ -1.17
CHD2-208	ENST00000626874	TNNC1	P63316	161 aa		7.74	□□□□□ -1.17
CHD2-208	ENST00000626874	RPUSD2	Q8IZ73	545 aa	Known RBP	7.74	□□□□□ -1.17
CHD2-208	ENST00000626874	FEZ2	Q9UHY8	353 aa	Predicted RBP	7.74	□□□□□ -1.17
CHD2-208	ENST00000626874	GGA1	Q9UJY5	639 aa		7.74	□□□□□ -1.17
CHD2-208	ENST00000626874	PTPN23	Q9H3S7	1636 aa		7.74	□□□□□ -1.17
CHD2-208	ENST00000626874	GRM8	O00222	908 aa		7.74	□□□□□ -1.17
CHD2-208	ENST00000626874	BIRC3	Q13489	604 aa		7.74	□□□□□ -1.17
CHD2-208	ENST00000626874	MAIP1	Q8WWC4	291 aa		7.74	□□□□□ -1.17
CHD2-208	ENST00000626874	IQCD	Q96DY2	449 aa		7.74	□□□□□ -1.17
CHD2-208	ENST00000626874		F8W031	263 aa	Predicted RBP	7.74	□□□□□ -1.17
CHD2-208	ENST00000626874	EPSTI1	Q96J88	318 aa		7.74	□□□□□ -1.17
CHD2-208	ENST00000626874	CCPG1	Q9ULG6	757 aa		7.74	□□□□□ -1.17
CHD2-208	ENST00000626874	SCAF11	Q99590	1463 aa	Known RBP	7.74	□□□□□ -1.17
CHD2-208	ENST00000626874	XPOT	O43592	962 aa	Known RBP	7.74	□□□□□ -1.17
CHD2-208	ENST00000626874	CIB2	O75838	187 aa		7.74	□□□□□ -1.17
CHD2-208	ENST00000626874	CCT2	P78371	535 aa	Known RBP	7.74	□□□□□ -1.17
CHD2-208	ENST00000626874	CCNA1	P78396	465 aa		7.74	□□□□□ -1.17
CHD2-208	ENST00000626874	SARNP	P82979	210 aa	Known RBP	7.74	□□□□□ -1.17
CHD2-208	ENST00000626874	CAMK4	Q16566	473 aa		7.74	□□□□□ -1.17
CHD2-208	ENST00000626874	CNNM4	Q6P4Q7	775 aa		7.74	□□□□□ -1.17
CHD2-208	ENST00000626874	LARGE2	Q8N3Y3	721 aa		7.74	□□□□□ -1.17
CHD2-208	ENST00000626874	EXOC4	Q96A65	974 aa		7.74	□□□□□ -1.17
CHD2-208	ENST00000626874	WDR46	O15213	610 aa	Known RBP	7.73	□□□□□ -1.17
CHD2-208	ENST00000626874	SNW1	Q13573	536 aa	Known RBP	7.73	□□□□□ -1.17
CHD2-208	ENST00000626874	BRAP	Q7Z569	592 aa		7.73	□□□□□ -1.17
CHD2-208	ENST00000626874	NLRX1	Q86UT6	975 aa		7.73	□□□□□ -1.17
CHD2-208	ENST00000626874	PAIP2	Q9BPZ3	127 aa	Known RBP	7.73	□□□□□ -1.17
CHD2-208	ENST00000626874	ODR4	Q5SWX8	454 aa		7.73	□□□□□ -1.17
CHD2-208	ENST00000626874	DCAF5	Q96JK2	942 aa		7.73	□□□□□ -1.17
CHD2-208	ENST00000626874	TTC1	Q99614	292 aa		7.73	□□□□□ -1.17
CHD2-208	ENST00000626874	SLC8A2	Q9UPR5	921 aa		7.73	□□□□□ -1.17
CHD2-208	ENST00000626874	ACTN4	O43707	911 aa	Known RBP	7.73	□□□□□ -1.17
CHD2-208	ENST00000626874	TRIM14	Q14142	442 aa		7.73	□□□□□ -1.17
CHD2-208	ENST00000626874	CCDC42	Q96M95	316 aa		7.73	□□□□□ -1.17
CHD2-208	ENST00000626874	TMOD1	P28289	359 aa		7.73	□□□□□ -1.17
CHD2-208	ENST00000626874	FYB2	Q5VWT5	728 aa		7.73	□□□□□ -1.17
CHD2-208	ENST00000626874	SV2B	Q7L1I2	683 aa		7.73	□□□□□ -1.17
CHD2-208	ENST00000626874	PSPC1	Q8WXF1	523 aa	Known RBP	7.73	□□□□□ -1.17
CHD2-208	ENST00000626874	SLC12A2	P55011	1212 aa		7.73	□□□□□ -1.17
CHD2-208	ENST00000626874	UBASH3A	P57075	661 aa		7.73	□□□□□ -1.17
CHD2-208	ENST00000626874	IQUB	Q8NA54	791 aa		7.73	□□□□□ -1.17
CHD2-208	ENST00000626874	HVCN1	Q96D96	273 aa		7.73	□□□□□ -1.17
CHD2-208	ENST00000626874	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	7.73	□□□□□ -1.17	2e-6	■■■□□ 16.7
CHD2-208	ENST00000626874	ARHGEF10	O15013	1369 aa		7.73	□□□□□ -1.17
CHD2-208	ENST00000626874	TMC6	Q7Z403	805 aa		7.73	□□□□□ -1.17

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