RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 CAVIN2O95810 425 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 FGAP02671 866 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 TPM3P06753 285 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 ZFYP08048 801 aaPredicted RBP3.79□□□□□ -1.8
U1.39-201ENST00000621562 HSP90B1P14625 803 aaKnown RBP3.79□□□□□ -1.8
U1.39-201ENST00000621562 FOSBP53539 338 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 HSPA2P54652 639 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 CTSWP56202 376 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 CCT2P78371 535 aaKnown RBP3.79□□□□□ -1.8
U1.39-201ENST00000621562 CCZ1BP86790 482 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 CCZ1P86791 482 aaPredicted RBP3.79□□□□□ -1.8
U1.39-201ENST00000621562 RBM10P98175 930 aaKnown RBP3.79□□□□□ -1.8
U1.39-201ENST00000621562 GUCY1B3Q02153 619 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 ALX1Q15699 326 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 NTRK3Q16288 839 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 HLFQ16534 295 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 ATP2B3Q16720 1220 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 TPRNQ4KMQ1 711 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 HSP90AB3PQ58FF7 597 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 MYSM1Q5VVJ2 828 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 OTUD7BQ6GQQ9 843 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 ZSCAN25Q6NSZ9 544 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 TOM1L2Q6ZVM7 507 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 CYB5R4Q7L1T6 521 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 CHST3Q7LGC8 479 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 NBPF11Q86T75 865 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 CCAR1Q8IX12 1150 aaKnown RBP3.79□□□□□ -1.8
U1.39-201ENST00000621562 FSIP1Q8NA03 581 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 ZBTB38Q8NAP3 1195 aaPredicted RBP3.79□□□□□ -1.8
U1.39-201ENST00000621562 SPC24Q8NBT2 197 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 LINC00301Q8NCQ3 95 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 TTLL11Q8NHH1 800 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 BICD2Q8TD16 824 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 CACTINQ8WUQ7 758 aaKnown RBP3.79□□□□□ -1.8
U1.39-201ENST00000621562 ANKRD7Q92527 254 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 MRFAP1L1Q96HT8 127 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 NEUROD6Q96NK8 337 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 MAP7D2Q96T17 732 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 HSD3B7Q9H2F3 369 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 BCL2L12Q9HB09 334 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 SENP2Q9HC62 589 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 PIH1D3Q9NQM4 214 aaKnown RBP3.79□□□□□ -1.8
U1.39-201ENST00000621562 KCND1Q9NSA2 647 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 FAM217BQ9NTX9 383 aaPredicted RBP3.79□□□□□ -1.8
U1.39-201ENST00000621562 POLR3EQ9NVU0 708 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 CEP126Q9P2H0 1117 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 ASAP1Q9ULH1 1129 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 PCDHA7Q9UN72 937 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 ZBTB1Q9Y2K1 713 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 CHMP3Q9Y3E7 222 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 CCDC9Q9Y3X0 531 aaKnown RBP3.79□□□□□ -1.8
U1.39-201ENST00000621562 BRWD3Q6RI45 1802 aa3.79□□□□□ -1.8
U1.39-201ENST00000621562 NRXN2Q9P2S2 1712 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 ZNFX1Q9P2E3 1918 aaKnown RBP3.78□□□□□ -1.8
U1.39-201ENST00000621562 STK36Q9NRP7 1315 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 KLF18A0A0U1RQI7 1052 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 GOLGA8BA8MQT2 603 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 H3BQV1 296 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 RIOK3O14730 519 aaKnown RBP3.78□□□□□ -1.8
U1.39-201ENST00000621562 CTAGE5O15320 804 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 CYP19A1P11511 503 aaPredicted RBP3.78□□□□□ -1.8
U1.39-201ENST00000621562 PDE6AP16499 860 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 CDC27P30260 824 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 PHKA1P46020 1223 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 ZNF165P49910 485 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 HAND2P61296 217 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 RBM6P78332 1123 aaKnown RBP3.78□□□□□ -1.8
U1.39-201ENST00000621562 ARID5BQ14865 1188 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 NCAPHQ15003 741 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 PTPAQ15257 358 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 UBE3CQ15386 1083 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 SYCP1Q15431 976 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 TTC39AQ5SRH9 613 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 IFFO2Q5TF58 517 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 ADALQ6DHV7 355 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 APOA5Q6Q788 366 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 NYAP1Q6ZVC0 841 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 CCDC186Q7Z3E2 898 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 BRAPQ7Z569 592 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 ZNF34Q8IZ26 560 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 FBXO18Q8NFZ0 1043 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 MRPS27Q92552 414 aaKnown RBP3.78□□□□□ -1.8
U1.39-201ENST00000621562 SHISA4Q96DD7 197 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 FAM89AQ96GI7 184 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 ZNF396Q96N95 335 aaPredicted RBP3.78□□□□□ -1.8
U1.39-201ENST00000621562 AIFM3Q96NN9 605 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 BPIFA3Q9BQP9 254 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 OSBPL5Q9H0X9 879 aaPredicted RBP3.78□□□□□ -1.8
U1.39-201ENST00000621562 GREM2Q9H772 168 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 LY9Q9HBG7 655 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 GJB4Q9NTQ9 266 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 TMOD3Q9NYL9 352 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 CFAP45Q9UL16 551 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 WWC3Q9ULE0 1092 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 HPSEQ9Y251 543 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 AKAP2Q9Y2D5 859 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 KIF3AQ9Y496 699 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 CLIC4Q9Y696 253 aa3.78□□□□□ -1.8
U1.39-201ENST00000621562 COL11A2P13942 1736 aaPredicted RBP3.78□□□□□ -1.8
U1.39-201ENST00000621562 ZNF804BA4D1E1 1349 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms