RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 TBC1D22AQ8WUA7 517 aa21.38■■□□□ 1.01
HMGN3-203ENST00000620514 COPRSQ9NQ92 184 aa21.38■■□□□ 1.01
HMGN3-203ENST00000620514 RNF186Q9NXI6 227 aa21.38■■□□□ 1.01
HMGN3-203ENST00000620514 TRPA1O75762 1119 aa21.37■■□□□ 1.01
HMGN3-203ENST00000620514 IL15P40933 162 aaPredicted RBP21.37■■□□□ 1.01
HMGN3-203ENST00000620514 MKRN3Q13064 507 aaKnown RBP21.37■■□□□ 1.01
HMGN3-203ENST00000620514 RASA3Q14644 834 aa21.37■■□□□ 1.01
HMGN3-203ENST00000620514 LDLRAD1Q5T700 205 aa21.37■■□□□ 1.01
HMGN3-203ENST00000620514 NBPF12Q5TAG4 269 aaPredicted RBP21.37■■□□□ 1.01
HMGN3-203ENST00000620514 SRGAP3O43295 1099 aa21.36■■□□□ 1.01
HMGN3-203ENST00000620514 TMEM57Q8N5G2 664 aa21.36■■□□□ 1.01
HMGN3-203ENST00000620514 CASP8AP2Q9UKL3 1982 aa21.36■■□□□ 1.01
HMGN3-203ENST00000620514 MTX1Q13505 466 aa21.35■■□□□ 1.01
HMGN3-203ENST00000620514 ZKSCAN2Q63HK3 967 aa21.35■■□□□ 1.01
HMGN3-203ENST00000620514 CDAN1Q8IWY9 1227 aa21.35■■□□□ 1.01
HMGN3-203ENST00000620514 SAGE1Q9NXZ1 904 aa21.35■■□□□ 1.01
HMGN3-203ENST00000620514 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.35■■□□□ 1.01
HMGN3-203ENST00000620514 TCP10L2B9ZVM9 353 aa21.34■■□□□ 1.01
HMGN3-203ENST00000620514 ADORA1P30542 326 aa21.34■■□□□ 1.01
HMGN3-203ENST00000620514 HDLBPQ00341 1268 aaKnown RBP21.34■■□□□ 1.01
HMGN3-203ENST00000620514 MAP3K11Q16584 847 aa21.34■■□□□ 1.01
HMGN3-203ENST00000620514 SUPT20HL1Q3ZLR7 823 aa21.34■■□□□ 1.01
HMGN3-203ENST00000620514 TEKT1Q969V4 418 aa21.34■■□□□ 1.01
HMGN3-203ENST00000620514 AKAP11Q9UKA4 1901 aa21.33■■□□□ 1.01
HMGN3-203ENST00000620514 ZBED9Q6R2W3 1325 aa21.33■■□□□ 1.01
HMGN3-203ENST00000620514 PPP1R12BO60237 982 aaPredicted RBP21.33■■□□□ 1.01
HMGN3-203ENST00000620514 GNAI2P04899 355 aa21.33■■□□□ 1.01
HMGN3-203ENST00000620514 PHKA1P46020 1223 aa21.33■■□□□ 1.01
HMGN3-203ENST00000620514 REM2Q8IYK8 340 aaPredicted RBP21.33■■□□□ 1.01
HMGN3-203ENST00000620514 CLMNQ96JQ2 1002 aa21.33■■□□□ 1.01
HMGN3-203ENST00000620514 MYH13Q9UKX3 1938 aa21.32■■□□□ 1
HMGN3-203ENST00000620514 CACNB3P54284 484 aa21.32■■□□□ 1
HMGN3-203ENST00000620514 TNFAIP1Q13829 316 aa21.32■■□□□ 1
HMGN3-203ENST00000620514 WDR66Q8TBY9 1149 aa21.32■■□□□ 1
HMGN3-203ENST00000620514 ABHD8Q96I13 439 aa21.32■■□□□ 1
HMGN3-203ENST00000620514 TEPSINQ96N21 525 aa21.32■■□□□ 1
HMGN3-203ENST00000620514 SUGT1Q9Y2Z0 365 aa21.32■■□□□ 1
HMGN3-203ENST00000620514 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.32■■□□□ 1
HMGN3-203ENST00000620514 PNMA6EA0A0J9YXQ4 647 aa21.31■■□□□ 1
HMGN3-203ENST00000620514 USP2O75604 605 aaPredicted RBP21.31■■□□□ 1
HMGN3-203ENST00000620514 TIMM10P62072 90 aa21.31■■□□□ 1
HMGN3-203ENST00000620514 TFCP2Q12800 502 aa21.31■■□□□ 1
HMGN3-203ENST00000620514 SPRYD7Q5W111 196 aa21.31■■□□□ 1
HMGN3-203ENST00000620514 ZDHHC15Q96MV8 337 aa21.31■■□□□ 1
HMGN3-203ENST00000620514 MRIQ9BWK5 157 aa21.31■■□□□ 1
HMGN3-203ENST00000620514 TMEM39BQ9GZU3 492 aa21.31■■□□□ 1
HMGN3-203ENST00000620514 MAST3O60307 1309 aa21.3■■□□□ 1
HMGN3-203ENST00000620514 APOBEC3HQ6NTF7 200 aaKnown RBP21.3■■□□□ 1
HMGN3-203ENST00000620514 SLC10A4Q96EP9 437 aa21.3■■□□□ 1
HMGN3-203ENST00000620514 GNL3LQ9NVN8 582 aaKnown RBP21.3■■□□□ 1
HMGN3-203ENST00000620514 RLBP1P12271 317 aa21.29■■□□□ 1
HMGN3-203ENST00000620514 PRDX5P30044 214 aa21.29■■□□□ 1
HMGN3-203ENST00000620514 TM4SF4P48230 202 aa21.29■■□□□ 1
HMGN3-203ENST00000620514 CCDC102BQ68D86 513 aa21.29■■□□□ 1
HMGN3-203ENST00000620514 MCOLN1Q9GZU1 580 aa21.29■■□□□ 1
HMGN3-203ENST00000620514 A0A1B0GUL7 405 aa21.28■■□□□ 1
HMGN3-203ENST00000620514 IREB2P48200 963 aaKnown RBP21.28■■□□□ 1
HMGN3-203ENST00000620514 TNNI2P48788 182 aa21.28■■□□□ 1
HMGN3-203ENST00000620514 DIXDC1Q155Q3 683 aa21.28■■□□□ 1
HMGN3-203ENST00000620514 HHIPL2Q6UWX4 724 aa21.28■■□□□ 1
HMGN3-203ENST00000620514 WNK4Q96J92 1243 aa21.28■■□□□ 1
HMGN3-203ENST00000620514 DENND2AQ9ULE3 1009 aa21.28■■□□□ 1
HMGN3-203ENST00000620514 TBC1D8O95759 1140 aa21.27■■□□□ 1
HMGN3-203ENST00000620514 XAGE2Q96GT9 111 aa21.27■■□□□ 1
HMGN3-203ENST00000620514 C1orf115Q9H7X2 142 aa21.27■■□□□ 1
HMGN3-203ENST00000620514 SEMA3EO15041 775 aa21.26■□□□□ 0.99
HMGN3-203ENST00000620514 GJA5P36382 358 aa21.26■□□□□ 0.99
HMGN3-203ENST00000620514 DGKZQ13574 1117 aa21.26■□□□□ 0.99
HMGN3-203ENST00000620514 FTSJ3Q8IY81 847 aaKnown RBP21.26■□□□□ 0.99
HMGN3-203ENST00000620514 AKAP2Q9Y2D5 859 aa21.26■□□□□ 0.99
HMGN3-203ENST00000620514 DAGLAQ9Y4D2 1042 aa21.26■□□□□ 0.99
HMGN3-203ENST00000620514 SALL1Q9NSC2 1324 aa21.26■□□□□ 0.99
HMGN3-203ENST00000620514 OTOFQ9HC10 1997 aa21.25■□□□□ 0.99
HMGN3-203ENST00000620514 LDHBP07195 334 aaKnown RBP21.25■□□□□ 0.99
HMGN3-203ENST00000620514 SREBF2Q12772 1141 aa21.25■□□□□ 0.99
HMGN3-203ENST00000620514 RASGRF1Q13972 1273 aa21.25■□□□□ 0.99
HMGN3-203ENST00000620514 ITPRIPQ8IWB1 547 aa21.25■□□□□ 0.99
HMGN3-203ENST00000620514 ANKRD13AQ8IZ07 590 aa21.25■□□□□ 0.99
HMGN3-203ENST00000620514 NEUROD6Q96NK8 337 aa21.25■□□□□ 0.99
HMGN3-203ENST00000620514 TMOD2Q9NZR1 351 aa21.25■□□□□ 0.99
HMGN3-203ENST00000620514 UNCXA6NJT0 531 aa21.24■□□□□ 0.99
HMGN3-203ENST00000620514 G3BP1Q13283 466 aaKnown RBP eCLIP21.24■□□□□ 0.99
HMGN3-203ENST00000620514 ELP3Q9H9T3 547 aa21.24■□□□□ 0.99
HMGN3-203ENST00000620514 ZBTB22O15209 634 aa21.23■□□□□ 0.99
HMGN3-203ENST00000620514 ZBTB48P10074 688 aaPredicted RBP21.23■□□□□ 0.99
HMGN3-203ENST00000620514 POLA2Q14181 598 aa21.23■□□□□ 0.99
HMGN3-203ENST00000620514 FKBP1CQ5VVH2 108 aa21.23■□□□□ 0.99
HMGN3-203ENST00000620514 CDC42EP5Q6NZY7 148 aa21.23■□□□□ 0.99
HMGN3-203ENST00000620514 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.23■□□□□ 0.99
HMGN3-203ENST00000620514 FAM83AQ86UY5 434 aa21.23■□□□□ 0.99
HMGN3-203ENST00000620514 R3HDMLQ9H3Y0 253 aa21.23■□□□□ 0.99
HMGN3-203ENST00000620514 MANSC4A6NHS7 340 aaPredicted RBP21.22■□□□□ 0.99
HMGN3-203ENST00000620514 ZBTB7BO15156 539 aaPredicted RBP21.22■□□□□ 0.99
HMGN3-203ENST00000620514 ATP8B2P98198 1209 aa21.22■□□□□ 0.99
HMGN3-203ENST00000620514 MVPQ14764 893 aaKnown RBP21.22■□□□□ 0.99
HMGN3-203ENST00000620514 CCDC85CA6NKD9 419 aa21.21■□□□□ 0.99
HMGN3-203ENST00000620514 NFIAQ12857 509 aa21.21■□□□□ 0.99
HMGN3-203ENST00000620514 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.21■□□□□ 0.99
HMGN3-203ENST00000620514 SSH3Q8TE77 659 aa21.21■□□□□ 0.99
HMGN3-203ENST00000620514 CNKSR2Q8WXI2 1034 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms