RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 CCDC102AQ96A19 550 aa15.9■□□□□ 0.14
CNOT3-210ENST00000618939 LRRC24Q50LG9 513 aa15.9■□□□□ 0.14
CNOT3-210ENST00000618939 JAKMIP3Q5VZ66 844 aa15.9■□□□□ 0.14
CNOT3-210ENST00000618939 USP28Q96RU2 1077 aa15.9■□□□□ 0.14
CNOT3-210ENST00000618939 RAB34Q9BZG1 259 aa15.9■□□□□ 0.14
CNOT3-210ENST00000618939 DLC1Q96QB1 1528 aa15.9■□□□□ 0.14
CNOT3-210ENST00000618939 CYP21A2P08686 494 aa15.89■□□□□ 0.14
CNOT3-210ENST00000618939 RRAGBQ5VZM2 374 aa15.89■□□□□ 0.14
CNOT3-210ENST00000618939 CLEC17AQ6ZS10 378 aa15.89■□□□□ 0.14
CNOT3-210ENST00000618939 NLRP3Q96P20 1036 aa15.89■□□□□ 0.14
CNOT3-210ENST00000618939 PIK3C2BO00750 1634 aa15.89■□□□□ 0.13
CNOT3-210ENST00000618939 TUBB4AP04350 444 aa15.89■□□□□ 0.13
CNOT3-210ENST00000618939 CDR1P51861 262 aa15.89■□□□□ 0.13
CNOT3-210ENST00000618939 MTX1Q13505 466 aa15.89■□□□□ 0.13
CNOT3-210ENST00000618939 VWDEQ8N2E2 1590 aa15.89■□□□□ 0.13
CNOT3-210ENST00000618939 NECTIN1Q15223 517 aa15.89■□□□□ 0.13
CNOT3-210ENST00000618939 ARMT1Q9H993 441 aa15.89■□□□□ 0.13
CNOT3-210ENST00000618939 USP31Q70CQ4 1352 aa15.89■□□□□ 0.13
CNOT3-210ENST00000618939 CRB1P82279 1406 aa15.89■□□□□ 0.13
CNOT3-210ENST00000618939 ZNF202O95125 648 aa15.89■□□□□ 0.13
CNOT3-210ENST00000618939 CALM1P0DP23 149 aa15.89■□□□□ 0.13
CNOT3-210ENST00000618939 CALM2P0DP24 149 aa15.89■□□□□ 0.13
CNOT3-210ENST00000618939 CALM3P0DP25 149 aa15.89■□□□□ 0.13
CNOT3-210ENST00000618939 BMS1Q14692 1282 aaKnown RBP15.89■□□□□ 0.13
CNOT3-210ENST00000618939 TMEM266Q2M3C6 531 aa15.89■□□□□ 0.13
CNOT3-210ENST00000618939 RPGRQ92834 1020 aaKnown RBP15.89■□□□□ 0.13
CNOT3-210ENST00000618939 CTAGE1Q96RT6 745 aa15.89■□□□□ 0.13
CNOT3-210ENST00000618939 ADCY9O60503 1353 aa15.89■□□□□ 0.13
CNOT3-210ENST00000618939 NEURL4Q96JN8 1562 aa15.88■□□□□ 0.13
CNOT3-210ENST00000618939 MTIF2P46199 727 aaKnown RBP15.88■□□□□ 0.13
CNOT3-210ENST00000618939 RILPL1Q5EBL4 403 aa15.88■□□□□ 0.13
CNOT3-210ENST00000618939 SMARCC1Q92922 1105 aaPredicted RBP15.88■□□□□ 0.13
CNOT3-210ENST00000618939 RMND1Q9NWS8 449 aa15.88■□□□□ 0.13
CNOT3-210ENST00000618939 MPHOSPH10O00566 681 aaKnown RBP15.88■□□□□ 0.13
CNOT3-210ENST00000618939 RIOK3O14730 519 aaKnown RBP15.88■□□□□ 0.13
CNOT3-210ENST00000618939 SPAG1Q07617 926 aa15.88■□□□□ 0.13
CNOT3-210ENST00000618939 CT47A1Q5JQC4 288 aaPredicted RBP15.88■□□□□ 0.13
CNOT3-210ENST00000618939 KRT40Q6A162 431 aa15.88■□□□□ 0.13
CNOT3-210ENST00000618939 LPIN2Q92539 896 aa15.88■□□□□ 0.13
CNOT3-210ENST00000618939 NGLY1Q96IV0 654 aa15.88■□□□□ 0.13
CNOT3-210ENST00000618939 VAT1LQ9HCJ6 419 aa15.88■□□□□ 0.13
CNOT3-210ENST00000618939 SETQ01105 290 aaPredicted RBP15.88■□□□□ 0.13
CNOT3-210ENST00000618939 PHKBQ93100 1093 aa15.88■□□□□ 0.13
CNOT3-210ENST00000618939 ZNF532Q9HCE3 1301 aa15.88■□□□□ 0.13
CNOT3-210ENST00000618939 MYSM1Q5VVJ2 828 aa15.87■□□□□ 0.13
CNOT3-210ENST00000618939 ZSWIM4Q9H7M6 989 aa15.87■□□□□ 0.13
CNOT3-210ENST00000618939 KRT2P35908 639 aa15.87■□□□□ 0.13
CNOT3-210ENST00000618939 SCRN1Q12765 414 aa15.87■□□□□ 0.13
CNOT3-210ENST00000618939 SLF2Q8IX21 1173 aa15.87■□□□□ 0.13
CNOT3-210ENST00000618939 MYL10Q9BUA6 226 aa15.87■□□□□ 0.13
CNOT3-210ENST00000618939 CCDC94Q9BW85 323 aaPredicted RBP15.87■□□□□ 0.13
CNOT3-210ENST00000618939 KCNH3Q9ULD8 1083 aa15.87■□□□□ 0.13
CNOT3-210ENST00000618939 PTPN12Q05209 780 aaKnown RBP15.87■□□□□ 0.13
CNOT3-210ENST00000618939 SYT10Q6XYQ8 523 aa15.87■□□□□ 0.13
CNOT3-210ENST00000618939 DIS3L2Q8IYB7 885 aaKnown RBP15.87■□□□□ 0.13
CNOT3-210ENST00000618939 ZDHHC9Q9Y397 364 aa15.87■□□□□ 0.13
CNOT3-210ENST00000618939 TRIM47Q96LD4 638 aa15.87■□□□□ 0.13
CNOT3-210ENST00000618939 SETDB2Q96T68 719 aa15.87■□□□□ 0.13
CNOT3-210ENST00000618939 CPS1P31327 1500 aa15.87■□□□□ 0.13
CNOT3-210ENST00000618939 POLR3GO15318 223 aaPredicted RBP15.86■□□□□ 0.13
CNOT3-210ENST00000618939 IDEP14735 1019 aa15.86■□□□□ 0.13
CNOT3-210ENST00000618939 STAT6P42226 847 aa15.86■□□□□ 0.13
CNOT3-210ENST00000618939 GNAQP50148 359 aa15.86■□□□□ 0.13
CNOT3-210ENST00000618939 AMPD3Q01432 767 aa15.86■□□□□ 0.13
CNOT3-210ENST00000618939 KRT222Q8N1A0 295 aa15.86■□□□□ 0.13
CNOT3-210ENST00000618939 CALML4Q96GE6 196 aa15.86■□□□□ 0.13
CNOT3-210ENST00000618939 CABP5Q9NP86 173 aa15.86■□□□□ 0.13
CNOT3-210ENST00000618939 DEXIO95424 95 aa15.86■□□□□ 0.13
CNOT3-210ENST00000618939 FGFR1OPO95684 399 aaKnown RBP15.86■□□□□ 0.13
CNOT3-210ENST00000618939 STX17P56962 302 aa15.86■□□□□ 0.13
CNOT3-210ENST00000618939 ADALQ6DHV7 355 aa15.86■□□□□ 0.13
CNOT3-210ENST00000618939 CACNA2D4Q7Z3S7 1137 aa15.86■□□□□ 0.13
CNOT3-210ENST00000618939 TSG101Q99816 390 aa15.86■□□□□ 0.13
CNOT3-210ENST00000618939 CCDC96Q2M329 555 aa15.86■□□□□ 0.13
CNOT3-210ENST00000618939 GPR108Q9NPR9 543 aa15.86■□□□□ 0.13
CNOT3-210ENST00000618939 CDC42BPGQ6DT37 1551 aa15.86■□□□□ 0.13
CNOT3-210ENST00000618939 PARP10Q53GL7 1025 aa15.86■□□□□ 0.13
CNOT3-210ENST00000618939 ZMYM1Q5SVZ6 1142 aa15.86■□□□□ 0.13
CNOT3-210ENST00000618939 ATP10DQ9P241 1426 aa15.86■□□□□ 0.13
CNOT3-210ENST00000618939 DEPDC5O75140 1603 aa15.85■□□□□ 0.13
CNOT3-210ENST00000618939 C6orf229H3BNL8 230 aa15.85■□□□□ 0.13
CNOT3-210ENST00000618939 TSPY3P0CV98 308 aa15.85■□□□□ 0.13
CNOT3-210ENST00000618939 TSPY8P0CW00 308 aa15.85■□□□□ 0.13
CNOT3-210ENST00000618939 FAM193AP78312 1265 aa15.85■□□□□ 0.13
CNOT3-210ENST00000618939 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.85■□□□□ 0.131e-6■■□□□ 11.7
CNOT3-210ENST00000618939 CUTAO60888 179 aa15.85■□□□□ 0.13
CNOT3-210ENST00000618939 FGAP02671 866 aa15.85■□□□□ 0.13
CNOT3-210ENST00000618939 CRACR2BQ8N4Y2 399 aaPredicted RBP15.85■□□□□ 0.13
CNOT3-210ENST00000618939 SRRTQ9BXP5 876 aaKnown RBP15.85■□□□□ 0.13
CNOT3-210ENST00000618939 PUS3Q9BZE2 481 aaKnown RBP15.85■□□□□ 0.13
CNOT3-210ENST00000618939 ZMYND15Q9H091 742 aa15.85■□□□□ 0.13
CNOT3-210ENST00000618939 CALML3P27482 149 aa15.85■□□□□ 0.13
CNOT3-210ENST00000618939 FANCCQ00597 558 aa15.85■□□□□ 0.13
CNOT3-210ENST00000618939 PDIA3P30101 505 aaKnown RBP15.84■□□□□ 0.13
CNOT3-210ENST00000618939 ZNF76P36508 570 aa15.84■□□□□ 0.13
CNOT3-210ENST00000618939 NLRP12P59046 1061 aa15.84■□□□□ 0.13
CNOT3-210ENST00000618939 CRACR2AQ9BSW2 395 aa15.84■□□□□ 0.13
CNOT3-210ENST00000618939 PCCAP05165 728 aaPredicted RBP15.84■□□□□ 0.13
CNOT3-210ENST00000618939 IGKV5-2P06315 115 aa15.84■□□□□ 0.13
CNOT3-210ENST00000618939 GSTO1P78417 241 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms