RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 PTH1RQ03431 593 aa13.97□□□□□ -0.17
MATR3-227ENST00000618441 UBXN6Q9BZV1 441 aa13.97□□□□□ -0.17
MATR3-227ENST00000618441 EMILIN1Q9Y6C2 1016 aa13.97□□□□□ -0.17
MATR3-227ENST00000618441 SLC3A2P08195 630 aaKnown RBP13.97□□□□□ -0.17
MATR3-227ENST00000618441 TRDNQ13061 729 aa13.97□□□□□ -0.17
MATR3-227ENST00000618441 CEP112Q8N8E3 955 aa13.97□□□□□ -0.17
MATR3-227ENST00000618441 DPF2Q92785 391 aa13.97□□□□□ -0.17
MATR3-227ENST00000618441 MRFAP1Q9Y605 127 aa13.97□□□□□ -0.17
MATR3-227ENST00000618441 PPRC1Q5VV67 1664 aaKnown RBP13.97□□□□□ -0.17
MATR3-227ENST00000618441 PNMA6EA0A0J9YXQ4 647 aa13.97□□□□□ -0.17
MATR3-227ENST00000618441 VWA3AA6NCI4 1184 aa13.97□□□□□ -0.17
MATR3-227ENST00000618441 MRPS25P82663 173 aaKnown RBP13.97□□□□□ -0.17
MATR3-227ENST00000618441 GOLPH3LQ9H4A5 285 aa13.97□□□□□ -0.17
MATR3-227ENST00000618441 ZNF202O95125 648 aa13.96□□□□□ -0.17
MATR3-227ENST00000618441 GCFC2P16383 781 aaKnown RBP13.96□□□□□ -0.17
MATR3-227ENST00000618441 SRGAP1Q7Z6B7 1085 aa13.96□□□□□ -0.17
MATR3-227ENST00000618441 PLEKHF1Q96S99 279 aa13.96□□□□□ -0.17
MATR3-227ENST00000618441 OSBPL5Q9H0X9 879 aaPredicted RBP13.96□□□□□ -0.17
MATR3-227ENST00000618441 AMOTL2Q9Y2J4 779 aa13.96□□□□□ -0.17
MATR3-227ENST00000618441 EME2A4GXA9 379 aaPredicted RBP13.96□□□□□ -0.17
MATR3-227ENST00000618441 JMYQ8N9B5 988 aa13.96□□□□□ -0.17
MATR3-227ENST00000618441 ZKSCAN4Q969J2 545 aaPredicted RBP13.96□□□□□ -0.17
MATR3-227ENST00000618441 NUDT16Q96DE0 195 aaKnown RBP13.96□□□□□ -0.17
MATR3-227ENST00000618441 EFCAB6Q5THR3 1501 aa13.96□□□□□ -0.18
MATR3-227ENST00000618441 POLR3DP05423 398 aaPredicted RBP13.96□□□□□ -0.18
MATR3-227ENST00000618441 CCT2P78371 535 aaKnown RBP13.96□□□□□ -0.18
MATR3-227ENST00000618441 MAP3K9P80192 1104 aa13.96□□□□□ -0.18
MATR3-227ENST00000618441 STIM1Q13586 685 aa13.96□□□□□ -0.18
MATR3-227ENST00000618441 IL16Q14005 1332 aa13.95□□□□□ -0.18
MATR3-227ENST00000618441 TUBB4AP04350 444 aa13.95□□□□□ -0.18
MATR3-227ENST00000618441 MTF1Q14872 753 aa13.95□□□□□ -0.18
MATR3-227ENST00000618441 KCTD16Q68DU8 428 aa13.95□□□□□ -0.18
MATR3-227ENST00000618441 ACRBPQ8NEB7 543 aa13.95□□□□□ -0.18
MATR3-227ENST00000618441 PARD3BQ8TEW8 1205 aa13.95□□□□□ -0.18
MATR3-227ENST00000618441 CAPS2Q9BXY5 557 aa13.95□□□□□ -0.18
MATR3-227ENST00000618441 FRMPD1Q5SYB0 1578 aa13.95□□□□□ -0.18
MATR3-227ENST00000618441 MATR3P43243 847 aaKnown RBP eCLIP13.95□□□□□ -0.181e-6■■□□□ 13.8
MATR3-227ENST00000618441 ARMC2Q8NEN0 867 aa13.95□□□□□ -0.18
MATR3-227ENST00000618441 EVI5LQ96CN4 794 aa13.95□□□□□ -0.18
MATR3-227ENST00000618441 TTC14Q96N46 770 aa13.95□□□□□ -0.18
MATR3-227ENST00000618441 YIPF3Q9GZM5 350 aa13.95□□□□□ -0.18
MATR3-227ENST00000618441 GPTP24298 496 aa13.95□□□□□ -0.18
MATR3-227ENST00000618441 PAIP2Q9BPZ3 127 aaKnown RBP13.95□□□□□ -0.18
MATR3-227ENST00000618441 GOLGA6L7A0A1B0GV03 622 aa13.94□□□□□ -0.18
MATR3-227ENST00000618441 SGSM2O43147 1006 aa13.94□□□□□ -0.18
MATR3-227ENST00000618441 HSPA2P54652 639 aa13.94□□□□□ -0.18
MATR3-227ENST00000618441 IFT88Q13099 833 aa13.94□□□□□ -0.18
MATR3-227ENST00000618441 PDCLQ13371 301 aa13.94□□□□□ -0.18
MATR3-227ENST00000618441 NUP133Q8WUM0 1156 aa13.94□□□□□ -0.18
MATR3-227ENST00000618441 ARAP3Q8WWN8 1544 aa13.94□□□□□ -0.18
MATR3-227ENST00000618441 TNRQ92752 1358 aa13.94□□□□□ -0.18
MATR3-227ENST00000618441 RIMS2Q9UQ26 1411 aa13.94□□□□□ -0.18
MATR3-227ENST00000618441 MAP2K7O14733 419 aa13.94□□□□□ -0.18
MATR3-227ENST00000618441 SH3BP5O60239 455 aa13.94□□□□□ -0.18
MATR3-227ENST00000618441 NBPF7P0C2Y1 421 aaPredicted RBP13.94□□□□□ -0.18
MATR3-227ENST00000618441 GGCXP38435 758 aa13.94□□□□□ -0.18
MATR3-227ENST00000618441 RUFY2Q8WXA3 655 aa13.94□□□□□ -0.18
MATR3-227ENST00000618441 NUCKS1Q9H1E3 243 aaKnown RBP13.94□□□□□ -0.18
MATR3-227ENST00000618441 L1RE1Q9UN81 338 aa13.94□□□□□ -0.18
MATR3-227ENST00000618441 METP08581 1390 aa13.94□□□□□ -0.18
MATR3-227ENST00000618441 FYB1O15117 783 aa13.94□□□□□ -0.18
MATR3-227ENST00000618441 A1BGP04217 495 aa13.94□□□□□ -0.18
MATR3-227ENST00000618441 PDHBP11177 359 aa13.94□□□□□ -0.18
MATR3-227ENST00000618441 NFE2L2Q16236 605 aa13.94□□□□□ -0.18
MATR3-227ENST00000618441 CCDC148Q8NFR7 591 aa13.94□□□□□ -0.18
MATR3-227ENST00000618441 POTEB2H3BUK9 544 aa13.93□□□□□ -0.18
MATR3-227ENST00000618441 IRX1P78414 480 aaPredicted RBP13.93□□□□□ -0.18
MATR3-227ENST00000618441 NCAPH2Q6IBW4 605 aa13.93□□□□□ -0.18
MATR3-227ENST00000618441 BAIAP2L1Q9UHR4 511 aa13.93□□□□□ -0.18
MATR3-227ENST00000618441 CUTAO60888 179 aa13.93□□□□□ -0.18
MATR3-227ENST00000618441 PAX3P23760 479 aa13.93□□□□□ -0.18
MATR3-227ENST00000618441 G2E3Q7L622 706 aa13.93□□□□□ -0.18
MATR3-227ENST00000618441 FAXDC2Q96IV6 333 aa13.93□□□□□ -0.18
MATR3-227ENST00000618441 USP28Q96RU2 1077 aa13.93□□□□□ -0.18
MATR3-227ENST00000618441 ANKZF1Q9H8Y5 726 aa13.93□□□□□ -0.18
MATR3-227ENST00000618441 ARHGAP6O43182 974 aa13.93□□□□□ -0.18
MATR3-227ENST00000618441 RSRC2Q7L4I2 434 aaKnown RBP13.93□□□□□ -0.18
MATR3-227ENST00000618441 MCM10Q7L590 875 aa13.93□□□□□ -0.18
MATR3-227ENST00000618441 KLC4Q9NSK0 619 aa13.93□□□□□ -0.18
MATR3-227ENST00000618441 TRPM1Q7Z4N2 1603 aa13.93□□□□□ -0.18
MATR3-227ENST00000618441 RNF17Q9BXT8 1623 aaKnown RBP13.93□□□□□ -0.18
MATR3-227ENST00000618441 CBFA2T2O43439 604 aa13.93□□□□□ -0.18
MATR3-227ENST00000618441 IRAK1P51617 712 aa13.93□□□□□ -0.18
MATR3-227ENST00000618441 RBBP5Q15291 538 aaKnown RBP13.93□□□□□ -0.18
MATR3-227ENST00000618441 OLFM4Q6UX06 510 aa13.93□□□□□ -0.18
MATR3-227ENST00000618441 RBM8AQ9Y5S9 174 aaKnown RBP13.93□□□□□ -0.18
MATR3-227ENST00000618441 DIP2CQ9Y2E4 1556 aa13.92□□□□□ -0.18
MATR3-227ENST00000618441 CPP00450 1065 aa13.92□□□□□ -0.18
MATR3-227ENST00000618441 COL9A3Q14050 684 aaPredicted RBP13.92□□□□□ -0.18
MATR3-227ENST00000618441 OTUD7BQ6GQQ9 843 aa13.92□□□□□ -0.18
MATR3-227ENST00000618441 NBPF5PQ86XG9 351 aaPredicted RBP13.92□□□□□ -0.18
MATR3-227ENST00000618441 CDC5LQ99459 802 aaKnown RBP13.92□□□□□ -0.18
MATR3-227ENST00000618441 CTAGE9A4FU28 777 aa13.92□□□□□ -0.18
MATR3-227ENST00000618441 CTDP1Q9Y5B0 961 aaPredicted RBP13.92□□□□□ -0.18
MATR3-227ENST00000618441 TET3O43151 1660 aa13.92□□□□□ -0.18
MATR3-227ENST00000618441 SPHKAPQ2M3C7 1700 aa13.92□□□□□ -0.18
MATR3-227ENST00000618441 A0A0U1RQJ8 604 aa13.92□□□□□ -0.18
MATR3-227ENST00000618441 NOA1Q8NC60 698 aaKnown RBP13.92□□□□□ -0.18
MATR3-227ENST00000618441 NBPF9Q3BBW0 867 aa13.91□□□□□ -0.18
MATR3-227ENST00000618441 TACO1Q9BSH4 297 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 189.3 ms