RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 NUCKS1Q9H1E3 243 aaKnown RBP6.46□□□□□ -1.38
CPNE4-214ENST00000617767 PAG1Q9NWQ8 432 aa6.46□□□□□ -1.38
CPNE4-214ENST00000617767 JAG2Q9Y219 1238 aa6.46□□□□□ -1.38
CPNE4-214ENST00000617767 CYP46A1Q9Y6A2 500 aa6.46□□□□□ -1.38
CPNE4-214ENST00000617767 KCPQ6ZWJ8 1503 aa6.46□□□□□ -1.38
CPNE4-214ENST00000617767 N4BP2Q86UW6 1770 aaPredicted RBP6.46□□□□□ -1.38
CPNE4-214ENST00000617767 PCNTO95613 3336 aa6.46□□□□□ -1.38
CPNE4-214ENST00000617767 SHANK3Q9BYB0 1731 aa6.46□□□□□ -1.38
CPNE4-214ENST00000617767 COL15A1P39059 1388 aa6.46□□□□□ -1.38
CPNE4-214ENST00000617767 LOC102724428A0A0B4J2F2 783 aa6.46□□□□□ -1.38
CPNE4-214ENST00000617767 SLC27A2O14975 620 aa6.46□□□□□ -1.38
CPNE4-214ENST00000617767 IDH1O75874 414 aaKnown RBP6.46□□□□□ -1.38
CPNE4-214ENST00000617767 SIK1P57059 783 aa6.46□□□□□ -1.38
CPNE4-214ENST00000617767 RBM6P78332 1123 aaKnown RBP6.46□□□□□ -1.38
CPNE4-214ENST00000617767 RABL6Q3YEC7 729 aaPredicted RBP6.46□□□□□ -1.38
CPNE4-214ENST00000617767 RINLQ6ZS11 566 aa6.46□□□□□ -1.38
CPNE4-214ENST00000617767 ANKRD23Q86SG2 305 aa6.46□□□□□ -1.38
CPNE4-214ENST00000617767 SLC51AQ86UW1 340 aa6.46□□□□□ -1.38
CPNE4-214ENST00000617767 TXLNBQ8N3L3 684 aa6.46□□□□□ -1.38
CPNE4-214ENST00000617767 NIP7Q9Y221 180 aaKnown RBP eCLIP6.46□□□□□ -1.38
CPNE4-214ENST00000617767 AOX1Q06278 1338 aa6.45□□□□□ -1.38
CPNE4-214ENST00000617767 MAP3K15Q6ZN16 1313 aa6.45□□□□□ -1.38
CPNE4-214ENST00000617767 UBN2Q6ZU65 1347 aa6.45□□□□□ -1.38
CPNE4-214ENST00000617767 SYCE3A1L190 88 aa6.45□□□□□ -1.38
CPNE4-214ENST00000617767 POLR3GO15318 223 aaPredicted RBP6.45□□□□□ -1.38
CPNE4-214ENST00000617767 FIBPO43427 364 aa6.45□□□□□ -1.38
CPNE4-214ENST00000617767 PAX7P23759 505 aa6.45□□□□□ -1.38
CPNE4-214ENST00000617767 ZAP70P43403 619 aa6.45□□□□□ -1.38
CPNE4-214ENST00000617767 TAF1P21675 1872 aa6.45□□□□□ -1.38
CPNE4-214ENST00000617767 SF3A1Q15459 793 aaKnown RBP6.45□□□□□ -1.38
CPNE4-214ENST00000617767 ME3Q16798 604 aa6.45□□□□□ -1.38
CPNE4-214ENST00000617767 NOM1Q5C9Z4 860 aaKnown RBP6.45□□□□□ -1.38
CPNE4-214ENST00000617767 MEX3CQ5U5Q3 659 aaKnown RBP6.45□□□□□ -1.38
CPNE4-214ENST00000617767 SUSD4Q5VX71 490 aa6.45□□□□□ -1.38
CPNE4-214ENST00000617767 GIGYF2Q6Y7W6 1299 aaKnown RBP6.45□□□□□ -1.38
CPNE4-214ENST00000617767 CCDC97Q96F63 343 aaPredicted RBP6.45□□□□□ -1.38
CPNE4-214ENST00000617767 TPCN1Q9ULQ1 816 aa6.45□□□□□ -1.38
CPNE4-214ENST00000617767 SMC3Q9UQE7 1217 aa6.45□□□□□ -1.38
CPNE4-214ENST00000617767 SPATA31A1Q5TZJ5 1347 aa6.45□□□□□ -1.38
CPNE4-214ENST00000617767 ADAMTS7Q9UKP4 1686 aa6.44□□□□□ -1.38
CPNE4-214ENST00000617767 GADD45BO75293 160 aaPredicted RBP6.44□□□□□ -1.38
CPNE4-214ENST00000617767 NEBLO76041 1014 aa6.44□□□□□ -1.38
CPNE4-214ENST00000617767 GJB2P29033 226 aa6.44□□□□□ -1.38
CPNE4-214ENST00000617767 IL15P40933 162 aaPredicted RBP6.44□□□□□ -1.38
CPNE4-214ENST00000617767 NUCB2P80303 420 aa6.44□□□□□ -1.38
CPNE4-214ENST00000617767 CEBPZQ03701 1054 aaKnown RBP6.44□□□□□ -1.38
CPNE4-214ENST00000617767 SLC4A8Q2Y0W8 1093 aa6.44□□□□□ -1.38
CPNE4-214ENST00000617767 ZNF397Q8NF99 534 aaPredicted RBP6.44□□□□□ -1.38
CPNE4-214ENST00000617767 ISCA1Q9BUE6 129 aa6.44□□□□□ -1.38
CPNE4-214ENST00000617767 GPHNQ9NQX3 736 aaPredicted RBP6.44□□□□□ -1.38
CPNE4-214ENST00000617767 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.44□□□□□ -1.38
CPNE4-214ENST00000617767 CIZ1Q9ULV3 898 aaPredicted RBP6.44□□□□□ -1.38
CPNE4-214ENST00000617767 V9GYY5 206 aaPredicted RBP6.44□□□□□ -1.38
CPNE4-214ENST00000617767 ZNF609O15014 1411 aa6.44□□□□□ -1.38
CPNE4-214ENST00000617767 CTAGE5O15320 804 aa6.44□□□□□ -1.38
CPNE4-214ENST00000617767 TOM1O60784 492 aa6.44□□□□□ -1.38
CPNE4-214ENST00000617767 ATP5JP18859 108 aa6.44□□□□□ -1.38
CPNE4-214ENST00000617767 BLOC1S2Q6QNY1 142 aa6.44□□□□□ -1.38
CPNE4-214ENST00000617767 ZBTB38Q8NAP3 1195 aaPredicted RBP6.44□□□□□ -1.38
CPNE4-214ENST00000617767 TTLL11Q8NHH1 800 aa6.44□□□□□ -1.38
CPNE4-214ENST00000617767 GPT2Q8TD30 523 aa6.44□□□□□ -1.38
CPNE4-214ENST00000617767 FAM210AQ96ND0 272 aa6.44□□□□□ -1.38
CPNE4-214ENST00000617767 FAM53CQ9NYF3 392 aa6.44□□□□□ -1.38
CPNE4-214ENST00000617767 CWC15Q9P013 229 aaKnown RBP6.44□□□□□ -1.38
CPNE4-214ENST00000617767 SRP68Q9UHB9 627 aaKnown RBP6.44□□□□□ -1.38
CPNE4-214ENST00000617767 CNPY2Q9Y2B0 182 aa6.44□□□□□ -1.38
CPNE4-214ENST00000617767 MRC1P22897 1456 aa6.44□□□□□ -1.38
CPNE4-214ENST00000617767 M0R2C6 588 aa6.44□□□□□ -1.38
CPNE4-214ENST00000617767 NECTIN1Q15223 517 aa6.44□□□□□ -1.38
CPNE4-214ENST00000617767 CCDC158Q5M9N0 1113 aa6.44□□□□□ -1.38
CPNE4-214ENST00000617767 ARMC3Q5W041 872 aa6.44□□□□□ -1.38
CPNE4-214ENST00000617767 DENND2AQ9ULE3 1009 aa6.44□□□□□ -1.38
CPNE4-214ENST00000617767 LIMCH1Q9UPQ0 1083 aa6.44□□□□□ -1.38
CPNE4-214ENST00000617767 BCL9O00512 1426 aa6.44□□□□□ -1.38
CPNE4-214ENST00000617767 CCDC196A0A1B0GTZ2 297 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 ANKRD18BA2A2Z9 1011 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 JAK2O60674 1132 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 CYP21A2P08686 494 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 PHKA1P46020 1223 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 ST5P78524 1137 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 GUCY1B3Q02153 619 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 TRDNQ13061 729 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 SYCP1Q15431 976 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 LRSAM1Q6UWE0 723 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 THOC1Q96FV9 657 aaKnown RBP6.43□□□□□ -1.38
CPNE4-214ENST00000617767 MPHOSPH8Q99549 860 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 NCOA5Q9HCD5 579 aaKnown RBP6.43□□□□□ -1.38
CPNE4-214ENST00000617767 INCENPQ9NQS7 918 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 NHSL1Q5SYE7 1610 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 GLI3P10071 1580 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 MYO5AQ9Y4I1 1855 aaKnown RBP6.43□□□□□ -1.38
CPNE4-214ENST00000617767 MYH14Q7Z406 1995 aaKnown RBP6.43□□□□□ -1.38
CPNE4-214ENST00000617767 COQ9O75208 318 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 ECEL1O95672 775 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 SYT1P21579 422 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 MAGEA9P43362 315 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 CTSWP56202 376 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 MCMDC2Q4G0Z9 681 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 TEX35Q5T0J7 233 aa6.43□□□□□ -1.38
CPNE4-214ENST00000617767 TBC1D22AQ8WUA7 517 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms