RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 A0A1W2PQ27 194 aa13.72□□□□□ -0.21
C11orf54-215ENST00000617482 A0A1W2PQ64 194 aa13.72□□□□□ -0.21
C11orf54-215ENST00000617482 A0A1W2PQD8 194 aa13.72□□□□□ -0.21
C11orf54-215ENST00000617482 SPDYE4A6NLX3 237 aa13.72□□□□□ -0.21
C11orf54-215ENST00000617482 SMTNL1A8MU46 457 aa13.72□□□□□ -0.21
C11orf54-215ENST00000617482 APPP05067 770 aa13.72□□□□□ -0.21
C11orf54-215ENST00000617482 PCCAP05165 728 aaPredicted RBP13.72□□□□□ -0.21
C11orf54-215ENST00000617482 SLC9C2Q5TAH2 1124 aa13.72□□□□□ -0.21
C11orf54-215ENST00000617482 KIF6Q6ZMV9 814 aa13.72□□□□□ -0.21
C11orf54-215ENST00000617482 ZBTB38Q8NAP3 1195 aaPredicted RBP13.72□□□□□ -0.21
C11orf54-215ENST00000617482 ANKRD7Q92527 254 aa13.72□□□□□ -0.21
C11orf54-215ENST00000617482 AIFM3Q96NN9 605 aa13.72□□□□□ -0.21
C11orf54-215ENST00000617482 TMOD3Q9NYL9 352 aa13.72□□□□□ -0.21
C11orf54-215ENST00000617482 CSF1RP07333 972 aa13.72□□□□□ -0.21
C11orf54-215ENST00000617482 ITGA6P23229 1130 aa13.72□□□□□ -0.21
C11orf54-215ENST00000617482 MARCKSP29966 332 aaPredicted RBP13.72□□□□□ -0.21
C11orf54-215ENST00000617482 CEP135Q66GS9 1140 aa13.72□□□□□ -0.21
C11orf54-215ENST00000617482 ISM2Q6H9L7 571 aa13.72□□□□□ -0.21
C11orf54-215ENST00000617482 GREM2Q9H772 168 aa13.72□□□□□ -0.21
C11orf54-215ENST00000617482 POLR3EQ9NVU0 708 aa13.72□□□□□ -0.21
C11orf54-215ENST00000617482 LAMB4A4D0S4 1761 aa13.72□□□□□ -0.21
C11orf54-215ENST00000617482 TJP1Q07157 1748 aa13.71□□□□□ -0.21
C11orf54-215ENST00000617482 IDH1O75874 414 aaKnown RBP13.71□□□□□ -0.21
C11orf54-215ENST00000617482 ZNF202O95125 648 aa13.71□□□□□ -0.21
C11orf54-215ENST00000617482 EVA1CP58658 441 aa13.71□□□□□ -0.21
C11orf54-215ENST00000617482 RBM6P78332 1123 aaKnown RBP13.71□□□□□ -0.21
C11orf54-215ENST00000617482 NCBP1Q09161 790 aaKnown RBP13.71□□□□□ -0.21
C11orf54-215ENST00000617482 TRDNQ13061 729 aa13.71□□□□□ -0.21
C11orf54-215ENST00000617482 HLFQ16534 295 aa13.71□□□□□ -0.21
C11orf54-215ENST00000617482 CCDC112Q8NEF3 446 aa13.71□□□□□ -0.21
C11orf54-215ENST00000617482 NBPF3Q9H094 633 aa13.71□□□□□ -0.21
C11orf54-215ENST00000617482 FBXO3Q9UK99 471 aa13.71□□□□□ -0.21
C11orf54-215ENST00000617482 RIPOR2Q9Y4F9 1068 aa13.71□□□□□ -0.21
C11orf54-215ENST00000617482 PAXBP1Q9Y5B6 917 aa13.71□□□□□ -0.21
C11orf54-215ENST00000617482 NEMFO60524 1076 aa13.71□□□□□ -0.22
C11orf54-215ENST00000617482 YEATS4O95619 227 aa13.71□□□□□ -0.22
C11orf54-215ENST00000617482 SLC3A2P08195 630 aaKnown RBP13.71□□□□□ -0.22
C11orf54-215ENST00000617482 U2AF2P26368 475 aaKnown RBP eCLIP13.71□□□□□ -0.228e-9■■■■□ 20.1
C11orf54-215ENST00000617482 KIF23Q02241 960 aaPredicted RBP13.71□□□□□ -0.22
C11orf54-215ENST00000617482 TRIM28Q13263 835 aaKnown RBP13.71□□□□□ -0.22
C11orf54-215ENST00000617482 ANO1Q5XXA6 986 aa13.71□□□□□ -0.22
C11orf54-215ENST00000617482 BRAPQ7Z569 592 aa13.71□□□□□ -0.22
C11orf54-215ENST00000617482 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.71□□□□□ -0.22
C11orf54-215ENST00000617482 CNNM1Q9NRU3 951 aa13.71□□□□□ -0.22
C11orf54-215ENST00000617482 CCZ1BP86790 482 aa13.7□□□□□ -0.22
C11orf54-215ENST00000617482 CCZ1P86791 482 aaPredicted RBP13.7□□□□□ -0.22
C11orf54-215ENST00000617482 CYB5R4Q7L1T6 521 aa13.7□□□□□ -0.22
C11orf54-215ENST00000617482 NBPF11Q86T75 865 aa13.7□□□□□ -0.22
C11orf54-215ENST00000617482 TBC1D10CQ8IV04 446 aa13.7□□□□□ -0.22
C11orf54-215ENST00000617482 CARD10Q9BWT7 1032 aa13.7□□□□□ -0.22
C11orf54-215ENST00000617482 NUP188Q5SRE5 1749 aa13.7□□□□□ -0.22
C11orf54-215ENST00000617482 WDHD1O75717 1129 aaPredicted RBP13.7□□□□□ -0.22
C11orf54-215ENST00000617482 SMC2O95347 1197 aa13.7□□□□□ -0.22
C11orf54-215ENST00000617482 PTPN14Q15678 1187 aa13.7□□□□□ -0.22
C11orf54-215ENST00000617482 TTLL11Q8NHH1 800 aa13.7□□□□□ -0.22
C11orf54-215ENST00000617482 SENP2Q9HC62 589 aa13.7□□□□□ -0.22
C11orf54-215ENST00000617482 INCENPQ9NQS7 918 aa13.7□□□□□ -0.22
C11orf54-215ENST00000617482 DCCP43146 1447 aa13.69□□□□□ -0.22
C11orf54-215ENST00000617482 PFKFB1P16118 471 aa13.69□□□□□ -0.22
C11orf54-215ENST00000617482 ADD2P35612 726 aa13.69□□□□□ -0.22
C11orf54-215ENST00000617482 AXDND1Q5T1B0 1012 aaPredicted RBP13.69□□□□□ -0.22
C11orf54-215ENST00000617482 SMAP1Q8IYB5 467 aaPredicted RBP13.69□□□□□ -0.22
C11orf54-215ENST00000617482 PIGBQ92521 554 aa13.69□□□□□ -0.22
C11orf54-215ENST00000617482 PHKBQ93100 1093 aa13.69□□□□□ -0.22
C11orf54-215ENST00000617482 PLA2G12BQ9BX93 195 aa13.69□□□□□ -0.22
C11orf54-215ENST00000617482 PIH1D3Q9NQM4 214 aaKnown RBP13.69□□□□□ -0.22
C11orf54-215ENST00000617482 IFNKQ9P0W0 207 aa13.69□□□□□ -0.22
C11orf54-215ENST00000617482 ANGEL1Q9UNK9 670 aaKnown RBP13.69□□□□□ -0.22
C11orf54-215ENST00000617482 NEDD4P46934 1319 aa13.69□□□□□ -0.22
C11orf54-215ENST00000617482 B4E1Z4 1266 aa13.69□□□□□ -0.22
C11orf54-215ENST00000617482 METAP2P50579 478 aaKnown RBP eCLIP13.69□□□□□ -0.22
C11orf54-215ENST00000617482 MICU3Q86XE3 530 aa13.69□□□□□ -0.22
C11orf54-215ENST00000617482 ALG1Q9BT22 464 aa13.69□□□□□ -0.22
C11orf54-215ENST00000617482 XPO4Q9C0E2 1151 aaKnown RBP13.69□□□□□ -0.22
C11orf54-215ENST00000617482 STARD3NLO95772 234 aa13.68□□□□□ -0.22
C11orf54-215ENST00000617482 CMA1P23946 247 aa13.68□□□□□ -0.22
C11orf54-215ENST00000617482 CDC27P30260 824 aa13.68□□□□□ -0.22
C11orf54-215ENST00000617482 NWD2Q9ULI1 1742 aa13.68□□□□□ -0.22
C11orf54-215ENST00000617482 ANKRD18BA2A2Z9 1011 aa13.68□□□□□ -0.22
C11orf54-215ENST00000617482 COL5A2P05997 1499 aaPredicted RBP13.68□□□□□ -0.22
C11orf54-215ENST00000617482 PHKA1P46020 1223 aa13.68□□□□□ -0.22
C11orf54-215ENST00000617482 GNL2Q13823 731 aaKnown RBP13.68□□□□□ -0.22
C11orf54-215ENST00000617482 GIGYF2Q6Y7W6 1299 aaKnown RBP13.68□□□□□ -0.22
C11orf54-215ENST00000617482 NLRP10Q86W26 655 aa13.68□□□□□ -0.22
C11orf54-215ENST00000617482 HELBQ8NG08 1087 aaPredicted RBP13.68□□□□□ -0.22
C11orf54-215ENST00000617482 MYL10Q9BUA6 226 aa13.68□□□□□ -0.22
C11orf54-215ENST00000617482 ZNF532Q9HCE3 1301 aa13.68□□□□□ -0.22
C11orf54-215ENST00000617482 MYH15Q9Y2K3 1946 aa13.68□□□□□ -0.22
C11orf54-215ENST00000617482 TNS2Q63HR2 1409 aa13.67□□□□□ -0.22
C11orf54-215ENST00000617482 MROH7-TTC4A0A0A0MT08 1334 aa13.67□□□□□ -0.22
C11orf54-215ENST00000617482 ZMYM6O95789 1325 aa13.67□□□□□ -0.22
C11orf54-215ENST00000617482 MAP3K15Q6ZN16 1313 aa13.67□□□□□ -0.22
C11orf54-215ENST00000617482 CTSWP56202 376 aa13.67□□□□□ -0.22
C11orf54-215ENST00000617482 NLRP12P59046 1061 aa13.67□□□□□ -0.22
C11orf54-215ENST00000617482 SLC39A14Q15043 492 aa13.67□□□□□ -0.22
C11orf54-215ENST00000617482 NYAP1Q6ZVC0 841 aa13.67□□□□□ -0.22
C11orf54-215ENST00000617482 TMC6Q7Z403 805 aa13.67□□□□□ -0.22
C11orf54-215ENST00000617482 VPS37DQ86XT2 251 aa13.67□□□□□ -0.22
C11orf54-215ENST00000617482 CCAR2Q8N163 923 aaKnown RBP13.67□□□□□ -0.22
C11orf54-215ENST00000617482 RIC1Q4ADV7 1423 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms