RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 ANO1Q5XXA6 986 aa7.65□□□□□ -1.19
LMO3-235ENST00000616247 AIFM3Q96NN9 605 aa7.65□□□□□ -1.19
LMO3-235ENST00000616247 ACBD3Q9H3P7 528 aa7.65□□□□□ -1.19
LMO3-235ENST00000616247 NFE2L3Q9Y4A8 694 aa7.65□□□□□ -1.19
LMO3-235ENST00000616247 CPS1P31327 1500 aa7.65□□□□□ -1.19
LMO3-235ENST00000616247 SOWAHDA6NJG2 315 aa7.64□□□□□ -1.19
LMO3-235ENST00000616247 FANCGO15287 622 aa7.64□□□□□ -1.19
LMO3-235ENST00000616247 COBLO75128 1261 aa7.64□□□□□ -1.19
LMO3-235ENST00000616247 ZMYND10O75800 440 aa7.64□□□□□ -1.19
LMO3-235ENST00000616247 CCDC175P0C221 793 aa7.64□□□□□ -1.19
LMO3-235ENST00000616247 PDIA3P30101 505 aaKnown RBP7.64□□□□□ -1.19
LMO3-235ENST00000616247 EIF4A1P60842 406 aaKnown RBP7.64□□□□□ -1.19
LMO3-235ENST00000616247 C1orf141Q5JVX7 400 aa7.64□□□□□ -1.19
LMO3-235ENST00000616247 MYSM1Q5VVJ2 828 aa7.64□□□□□ -1.19
LMO3-235ENST00000616247 SMARCC1Q92922 1105 aaPredicted RBP7.64□□□□□ -1.19
LMO3-235ENST00000616247 FAM204AQ9H8W3 233 aa7.64□□□□□ -1.19
LMO3-235ENST00000616247 HOOK1Q9UJC3 728 aaKnown RBP7.64□□□□□ -1.19
LMO3-235ENST00000616247 ADCY9O60503 1353 aa7.64□□□□□ -1.19
LMO3-235ENST00000616247 ATP8B1O43520 1251 aa7.64□□□□□ -1.19
LMO3-235ENST00000616247 TIMM10P62072 90 aa7.64□□□□□ -1.19
LMO3-235ENST00000616247 TRIM29Q14134 588 aa7.64□□□□□ -1.19
LMO3-235ENST00000616247 CCDC102BQ68D86 513 aa7.64□□□□□ -1.19
LMO3-235ENST00000616247 CTR9Q6PD62 1173 aa7.64□□□□□ -1.19
LMO3-235ENST00000616247 KSR2Q6VAB6 950 aa7.64□□□□□ -1.19
LMO3-235ENST00000616247 NFXL1Q6ZNB6 911 aa7.64□□□□□ -1.19
LMO3-235ENST00000616247 UBE3BQ7Z3V4 1068 aa7.64□□□□□ -1.19
LMO3-235ENST00000616247 PACS2Q86VP3 889 aa7.64□□□□□ -1.19
LMO3-235ENST00000616247 KCNB2Q92953 911 aa7.64□□□□□ -1.19
LMO3-235ENST00000616247 LLPHQ9BRT6 129 aaKnown RBP7.64□□□□□ -1.19
LMO3-235ENST00000616247 DBNLQ9UJU6 430 aaKnown RBP7.64□□□□□ -1.19
LMO3-235ENST00000616247 ZNF330Q9Y3S2 320 aaPredicted RBP7.64□□□□□ -1.19
LMO3-235ENST00000616247 PCDHA5Q9Y5H7 936 aa7.64□□□□□ -1.19
LMO3-235ENST00000616247 MLH3Q9UHC1 1453 aa7.64□□□□□ -1.19
LMO3-235ENST00000616247 CTAGE15A4D2H0 777 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 CCDC151A5D8V7 595 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 GOLGA6L9A6NEM1 432 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 FOXN1O15353 648 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 HMGB1P09429 215 aaKnown RBP7.63□□□□□ -1.19
LMO3-235ENST00000616247 CTAGE8P0CG41 777 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 MAP3K9P80192 1104 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 PSME1Q06323 249 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 NCAPHQ15003 741 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 TTC19Q6DKK2 380 aaPredicted RBP7.63□□□□□ -1.19
LMO3-235ENST00000616247 CTAGE6Q86UF2 777 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 VSTM4Q8IW00 320 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 CTAGE4Q8IX94 777 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 CAPZA3Q96KX2 299 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 CCDC85AQ96PX6 553 aaPredicted RBP7.63□□□□□ -1.19
LMO3-235ENST00000616247 RTEL1Q9NZ71 1219 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 MRFAP1Q9Y605 127 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 ARHGEF28Q8N1W1 1705 aaKnown RBP7.63□□□□□ -1.19
LMO3-235ENST00000616247 SIGLEC1Q9BZZ2 1709 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 A0A0U1RQJ8 604 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 E7EWF7 191 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 ALDH1L1O75891 902 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 NOP2P46087 812 aaKnown RBP7.63□□□□□ -1.19
LMO3-235ENST00000616247 TRDNQ13061 729 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 GRAMD1CQ8IYS0 662 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 JMYQ8N9B5 988 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 CAGE1Q8TC20 777 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 ATRIPQ8WXE1 791 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 CDC5LQ99459 802 aaKnown RBP7.63□□□□□ -1.19
LMO3-235ENST00000616247 HECW2Q9P2P5 1572 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 DIP2CQ9Y2E4 1556 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 CTAGE9A4FU28 777 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 MAGEA9P43362 315 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 SLC39A6Q13433 755 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 BRD3Q15059 726 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 SRGAP1Q7Z6B7 1085 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 MICU3Q86XE3 530 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 SMARCC2Q8TAQ2 1214 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 PPM1EQ8WY54 764 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 RIN2Q8WYP3 895 aaPredicted RBP7.63□□□□□ -1.19
LMO3-235ENST00000616247 PNKPQ96T60 521 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 CRACR2AQ9BSW2 395 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 ALG1Q9BT22 464 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 MRPL44Q9H9J2 332 aaKnown RBP7.63□□□□□ -1.19
LMO3-235ENST00000616247 METP08581 1390 aa7.63□□□□□ -1.19
LMO3-235ENST00000616247 AFMP43652 599 aa7.62□□□□□ -1.19
LMO3-235ENST00000616247 CASP8Q14790 479 aa7.62□□□□□ -1.19
LMO3-235ENST00000616247 SPECC1LQ69YQ0 1117 aa7.62□□□□□ -1.19
LMO3-235ENST00000616247 ILDR1Q86SU0 546 aaPredicted RBP7.62□□□□□ -1.19
LMO3-235ENST00000616247 LINS1Q8NG48 757 aa7.62□□□□□ -1.19
LMO3-235ENST00000616247 PHKBQ93100 1093 aa7.62□□□□□ -1.19
LMO3-235ENST00000616247 LRRC59Q96AG4 307 aaKnown RBP7.62□□□□□ -1.19
LMO3-235ENST00000616247 CENPHQ9H3R5 247 aa7.62□□□□□ -1.19
LMO3-235ENST00000616247 SAMSN1Q9NSI8 373 aaKnown RBP7.62□□□□□ -1.19
LMO3-235ENST00000616247 FLT4P35916 1363 aa7.62□□□□□ -1.19
LMO3-235ENST00000616247 CARMIL3Q8ND23 1372 aa7.62□□□□□ -1.19
LMO3-235ENST00000616247 MROH1Q8NDA8 1641 aa7.62□□□□□ -1.19
LMO3-235ENST00000616247 A0A1W2PQ27 194 aa7.62□□□□□ -1.19
LMO3-235ENST00000616247 A0A1W2PQ64 194 aa7.62□□□□□ -1.19
LMO3-235ENST00000616247 A0A1W2PQD8 194 aa7.62□□□□□ -1.19
LMO3-235ENST00000616247 PRC1O43663 620 aa7.62□□□□□ -1.19
LMO3-235ENST00000616247 VSNL1P62760 191 aa7.62□□□□□ -1.19
LMO3-235ENST00000616247 TNNI3KQ59H18 835 aa7.62□□□□□ -1.19
LMO3-235ENST00000616247 EPHA10Q5JZY3 1008 aa7.62□□□□□ -1.19
LMO3-235ENST00000616247 CPLX2Q6PUV4 134 aaKnown RBP7.62□□□□□ -1.19
LMO3-235ENST00000616247 SLC35F6Q8N357 371 aa7.62□□□□□ -1.19
LMO3-235ENST00000616247 CEP112Q8N8E3 955 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms