RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 MRPL50Q8N5N7 158 aaKnown RBP21.1■□□□□ 0.97
GABPB1-212ENST00000615671 TIGD1Q96MW7 591 aa21.1■□□□□ 0.97
GABPB1-212ENST00000615671 CTNND2Q9UQB3 1225 aa21.1■□□□□ 0.97
GABPB1-212ENST00000615671 DNAJC21Q5F1R6 531 aaKnown RBP21.1■□□□□ 0.97
GABPB1-212ENST00000615671 LZTFL1Q9NQ48 299 aa21.1■□□□□ 0.97
GABPB1-212ENST00000615671 GNAT2P19087 354 aa21.1■□□□□ 0.97
GABPB1-212ENST00000615671 GABPAQ06546 454 aa21.1■□□□□ 0.97
GABPB1-212ENST00000615671 ANKRD36BQ8N2N9 1353 aa21.1■□□□□ 0.97
GABPB1-212ENST00000615671 TOP2BQ02880 1626 aa21.1■□□□□ 0.97
GABPB1-212ENST00000615671 ATP8B2P98198 1209 aa21.09■□□□□ 0.97
GABPB1-212ENST00000615671 DHX29Q7Z478 1369 aaKnown RBP21.09■□□□□ 0.97
GABPB1-212ENST00000615671 SPTLC2O15270 562 aa21.09■□□□□ 0.97
GABPB1-212ENST00000615671 MCM6Q14566 821 aa21.09■□□□□ 0.97
GABPB1-212ENST00000615671 BMP15O95972 392 aa21.09■□□□□ 0.97
GABPB1-212ENST00000615671 GEN1Q17RS7 908 aa21.09■□□□□ 0.97
GABPB1-212ENST00000615671 MAP7D1Q3KQU3 841 aa21.09■□□□□ 0.97
GABPB1-212ENST00000615671 ZNF594Q96JF6 807 aaPredicted RBP21.09■□□□□ 0.97
GABPB1-212ENST00000615671 AATFQ9NY61 560 aaKnown RBP eCLIP21.09■□□□□ 0.97
GABPB1-212ENST00000615671 GOLGA6L9A6NEM1 432 aa21.09■□□□□ 0.97
GABPB1-212ENST00000615671 CCT6AP40227 531 aaKnown RBP21.09■□□□□ 0.97
GABPB1-212ENST00000615671 LARGE2Q8N3Y3 721 aa21.09■□□□□ 0.97
GABPB1-212ENST00000615671 CTAGE15A4D2H0 777 aa21.09■□□□□ 0.97
GABPB1-212ENST00000615671 CCDC160A6NGH7 325 aa21.09■□□□□ 0.97
GABPB1-212ENST00000615671 CTAGE8P0CG41 777 aa21.09■□□□□ 0.97
GABPB1-212ENST00000615671 CTAGE6Q86UF2 777 aa21.09■□□□□ 0.97
GABPB1-212ENST00000615671 CTAGE4Q8IX94 777 aa21.09■□□□□ 0.97
GABPB1-212ENST00000615671 GPATCH11Q8N954 259 aa21.09■□□□□ 0.97
GABPB1-212ENST00000615671 KIFC2Q96AC6 838 aa21.09■□□□□ 0.97
GABPB1-212ENST00000615671 KCNK9Q9NPC2 374 aa21.09■□□□□ 0.97
GABPB1-212ENST00000615671 TACC1O75410 805 aa21.08■□□□□ 0.97
GABPB1-212ENST00000615671 ZBTB16Q05516 673 aa21.08■□□□□ 0.97
GABPB1-212ENST00000615671 CLSTN2Q9H4D0 955 aa21.08■□□□□ 0.97
GABPB1-212ENST00000615671 PLCH2O75038 1416 aa21.08■□□□□ 0.97
GABPB1-212ENST00000615671 ITGA6P23229 1130 aa21.08■□□□□ 0.97
GABPB1-212ENST00000615671 IVNS1ABPQ9Y6Y0 642 aa21.08■□□□□ 0.97
GABPB1-212ENST00000615671 B4E1Z4 1266 aa21.08■□□□□ 0.96
GABPB1-212ENST00000615671 CSPG5O95196 566 aa21.08■□□□□ 0.96
GABPB1-212ENST00000615671 SKILP12757 684 aa21.08■□□□□ 0.96
GABPB1-212ENST00000615671 NACA2Q9H009 215 aa21.08■□□□□ 0.96
GABPB1-212ENST00000615671 FRMD4BQ9Y2L6 1034 aa21.07■□□□□ 0.96
GABPB1-212ENST00000615671 ERCC5P28715 1186 aaPredicted RBP21.07■□□□□ 0.96
GABPB1-212ENST00000615671 TLDC2A0PJX2 215 aa21.07■□□□□ 0.96
GABPB1-212ENST00000615671 CRCPO75575 148 aa21.07■□□□□ 0.96
GABPB1-212ENST00000615671 NCAPH2Q6IBW4 605 aa21.07■□□□□ 0.96
GABPB1-212ENST00000615671 ANO3Q9BYT9 981 aa21.07■□□□□ 0.96
GABPB1-212ENST00000615671 MAPK8IP1Q9UQF2 711 aa21.07■□□□□ 0.96
GABPB1-212ENST00000615671 CPA1P15085 419 aa21.07■□□□□ 0.96
GABPB1-212ENST00000615671 CALML3P27482 149 aa21.07■□□□□ 0.96
GABPB1-212ENST00000615671 RNASE9P60153 205 aaKnown RBP21.07■□□□□ 0.96
GABPB1-212ENST00000615671 CREB3L3Q68CJ9 461 aa21.07■□□□□ 0.96
GABPB1-212ENST00000615671 ZWINTO95229 277 aa21.07■□□□□ 0.96
GABPB1-212ENST00000615671 TPD52P55327 224 aaPredicted RBP21.07■□□□□ 0.96
GABPB1-212ENST00000615671 SMC1BQ8NDV3 1235 aa21.07■□□□□ 0.96
GABPB1-212ENST00000615671 TBC1D7Q9P0N9 293 aa21.07■□□□□ 0.96
GABPB1-212ENST00000615671 GNA11P29992 359 aa21.06■□□□□ 0.96
GABPB1-212ENST00000615671 PCDH11XQ9BZA7 1347 aa21.06■□□□□ 0.96
GABPB1-212ENST00000615671 PCDH11YQ9BZA8 1340 aa21.06■□□□□ 0.96
GABPB1-212ENST00000615671 DAPK3O43293 454 aa21.06■□□□□ 0.96
GABPB1-212ENST00000615671 WDR44Q5JSH3 913 aa21.06■□□□□ 0.96
GABPB1-212ENST00000615671 TSPYL6Q8N831 410 aa21.06■□□□□ 0.96
GABPB1-212ENST00000615671 BIRC2Q13490 618 aa21.06■□□□□ 0.96
GABPB1-212ENST00000615671 CCDC186Q7Z3E2 898 aa21.06■□□□□ 0.96
GABPB1-212ENST00000615671 ATRIPQ8WXE1 791 aa21.06■□□□□ 0.96
GABPB1-212ENST00000615671 CCDC42Q96M95 316 aa21.06■□□□□ 0.96
GABPB1-212ENST00000615671 NSD2O96028 1365 aa21.06■□□□□ 0.96
GABPB1-212ENST00000615671 PRDM1O75626 825 aa21.06■□□□□ 0.96
GABPB1-212ENST00000615671 AK2P54819 239 aa21.06■□□□□ 0.96
GABPB1-212ENST00000615671 MSANTD4Q8NCY6 345 aa21.06■□□□□ 0.96
GABPB1-212ENST00000615671 ALDH1L1O75891 902 aa21.06■□□□□ 0.96
GABPB1-212ENST00000615671 KLHDC4Q8TBB5 520 aa21.06■□□□□ 0.96
GABPB1-212ENST00000615671 GGA1Q9UJY5 639 aa21.06■□□□□ 0.96
GABPB1-212ENST00000615671 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.05■□□□□ 0.96
GABPB1-212ENST00000615671 ATP2A1O14983 1001 aa21.05■□□□□ 0.96
GABPB1-212ENST00000615671 RAD51AP2Q09MP3 1159 aa21.05■□□□□ 0.96
GABPB1-212ENST00000615671 PIK3AP1Q6ZUJ8 805 aa21.05■□□□□ 0.96
GABPB1-212ENST00000615671 PPANQ9NQ55 473 aaKnown RBP21.05■□□□□ 0.96
GABPB1-212ENST00000615671 PFDN4Q9NQP4 134 aa21.05■□□□□ 0.96
GABPB1-212ENST00000615671 F13A1P00488 732 aa21.05■□□□□ 0.96
GABPB1-212ENST00000615671 E7EVH7 732 aa21.05■□□□□ 0.96
GABPB1-212ENST00000615671 HIBADHP31937 336 aaKnown RBP21.05■□□□□ 0.96
GABPB1-212ENST00000615671 DPP8Q6V1X1 898 aaPredicted RBP21.05■□□□□ 0.96
GABPB1-212ENST00000615671 ARHGEF10LQ9HCE6 1279 aa21.05■□□□□ 0.96
GABPB1-212ENST00000615671 DTNBO60941 627 aa21.05■□□□□ 0.96
GABPB1-212ENST00000615671 PRPHP41219 470 aa21.05■□□□□ 0.96
GABPB1-212ENST00000615671 TIMM10P62072 90 aa21.05■□□□□ 0.96
GABPB1-212ENST00000615671 CTAGE9A4FU28 777 aa21.04■□□□□ 0.96
GABPB1-212ENST00000615671 H0YIN7 160 aa21.04■□□□□ 0.96
GABPB1-212ENST00000615671 SPATA24Q86W54 205 aa21.04■□□□□ 0.96
GABPB1-212ENST00000615671 RIMS2Q9UQ26 1411 aa21.04■□□□□ 0.96
GABPB1-212ENST00000615671 KIF5AQ12840 1032 aa21.04■□□□□ 0.96
GABPB1-212ENST00000615671 LEO1Q8WVC0 666 aaPredicted RBP21.04■□□□□ 0.96
GABPB1-212ENST00000615671 DDX12PQ92771 950 aa21.04■□□□□ 0.96
GABPB1-212ENST00000615671 BICDL2A1A5D9 508 aa21.04■□□□□ 0.96
GABPB1-212ENST00000615671 RNMTO43148 476 aaKnown RBP21.04■□□□□ 0.96
GABPB1-212ENST00000615671 APBA3O96018 575 aa21.04■□□□□ 0.96
GABPB1-212ENST00000615671 KRT19P08727 400 aa21.04■□□□□ 0.96
GABPB1-212ENST00000615671 RHOXF2BP0C7M4 288 aa21.04■□□□□ 0.96
GABPB1-212ENST00000615671 CFAP157Q5JU67 520 aa21.04■□□□□ 0.96
GABPB1-212ENST00000615671 TTC6Q86TZ1 520 aa21.04■□□□□ 0.96
GABPB1-212ENST00000615671 RHOXF2Q9BQY4 288 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms