RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 ECM29Q5VYK3 1845 aa22.43■■□□□ 1.18
SMN2-213ENST00000614240 GJA5P36382 358 aa22.43■■□□□ 1.18
SMN2-213ENST00000614240 RABL6Q3YEC7 729 aaPredicted RBP22.43■■□□□ 1.18
SMN2-213ENST00000614240 ANKRD44Q8N8A2 993 aa22.43■■□□□ 1.18
SMN2-213ENST00000614240 OPTNQ96CV9 577 aa22.43■■□□□ 1.18
SMN2-213ENST00000614240 ERO1AQ96HE7 468 aa22.43■■□□□ 1.18
SMN2-213ENST00000614240 PTPRCP08575 1304 aa22.42■■□□□ 1.18
SMN2-213ENST00000614240 CRHR2Q13324 411 aa22.42■■□□□ 1.18
SMN2-213ENST00000614240 TMEM39BQ9GZU3 492 aa22.42■■□□□ 1.18
SMN2-213ENST00000614240 PDE8BO95263 885 aa22.41■■□□□ 1.18
SMN2-213ENST00000614240 OTOP1Q7RTM1 612 aa22.41■■□□□ 1.18
SMN2-213ENST00000614240 TEKT1Q969V4 418 aa22.41■■□□□ 1.18
SMN2-213ENST00000614240 TEPSINQ96N21 525 aa22.41■■□□□ 1.18
SMN2-213ENST00000614240 CSADQ9Y600 493 aa22.41■■□□□ 1.18
SMN2-213ENST00000614240 PDE4DIPQ5VU43 2346 aa22.41■■□□□ 1.18
SMN2-213ENST00000614240 ZNF521Q96K83 1311 aa22.4■■□□□ 1.18
SMN2-213ENST00000614240 MAP3K9P80192 1104 aa22.4■■□□□ 1.18
SMN2-213ENST00000614240 HDLBPQ00341 1268 aaKnown RBP22.4■■□□□ 1.18
SMN2-213ENST00000614240 GRIK5Q16478 980 aa22.4■■□□□ 1.18
SMN2-213ENST00000614240 PRPF38BQ5VTL8 546 aaKnown RBP22.4■■□□□ 1.18
SMN2-213ENST00000614240 CDAN1Q8IWY9 1227 aa22.4■■□□□ 1.18
SMN2-213ENST00000614240 CD99L2Q8TCZ2 262 aa22.4■■□□□ 1.18
SMN2-213ENST00000614240 TMOD2Q9NZR1 351 aa22.4■■□□□ 1.18
SMN2-213ENST00000614240 IFIT1P09914 478 aaKnown RBP22.39■■□□□ 1.17
SMN2-213ENST00000614240 BCAMP50895 628 aa22.39■■□□□ 1.17
SMN2-213ENST00000614240 KLHDC4Q8TBB5 520 aa22.39■■□□□ 1.17
SMN2-213ENST00000614240 PTPN18Q99952 460 aa22.39■■□□□ 1.17
SMN2-213ENST00000614240 TESPA1A2RU30 521 aaPredicted RBP22.38■■□□□ 1.17
SMN2-213ENST00000614240 E9PSI1 815 aa22.38■■□□□ 1.17
SMN2-213ENST00000614240 CACNB3P54284 484 aa22.38■■□□□ 1.17
SMN2-213ENST00000614240 SP3Q02447 781 aa22.38■■□□□ 1.17
SMN2-213ENST00000614240 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.38■■□□□ 1.17
SMN2-213ENST00000614240 SSH1Q8WYL5 1049 aa22.38■■□□□ 1.17
SMN2-213ENST00000614240 EFCC1Q9HA90 598 aa22.38■■□□□ 1.17
SMN2-213ENST00000614240 GTF2A2P52657 109 aa22.37■■□□□ 1.17
SMN2-213ENST00000614240 VGLL4Q14135 290 aa22.37■■□□□ 1.17
SMN2-213ENST00000614240 PUM3Q15397 648 aaKnown RBP22.37■■□□□ 1.17
SMN2-213ENST00000614240 INTS3Q68E01 1043 aaKnown RBP22.37■■□□□ 1.17
SMN2-213ENST00000614240 VGLL2Q8N8G2 317 aa22.37■■□□□ 1.17
SMN2-213ENST00000614240 CNKSR2Q8WXI2 1034 aa22.37■■□□□ 1.17
SMN2-213ENST00000614240 OTUD5Q96G74 571 aa22.37■■□□□ 1.17
SMN2-213ENST00000614240 USP44Q9H0E7 712 aa22.37■■□□□ 1.17
SMN2-213ENST00000614240 MAST3O60307 1309 aa22.36■■□□□ 1.17
SMN2-213ENST00000614240 CCL15-CCL14A0A0B4J2E2 113 aa22.36■■□□□ 1.17
SMN2-213ENST00000614240 TAF1CQ15572 869 aaPredicted RBP22.36■■□□□ 1.17
SMN2-213ENST00000614240 CCL15Q16663 113 aa22.36■■□□□ 1.17
SMN2-213ENST00000614240 MS4A4AQ96JQ5 239 aa22.36■■□□□ 1.17
SMN2-213ENST00000614240 PTPN22Q9Y2R2 807 aa22.36■■□□□ 1.17
SMN2-213ENST00000614240 WDHD1O75717 1129 aaPredicted RBP22.35■■□□□ 1.17
SMN2-213ENST00000614240 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.35■■□□□ 1.17
SMN2-213ENST00000614240 HOOK2Q96ED9 719 aa22.35■■□□□ 1.17
SMN2-213ENST00000614240 ZDHHC15Q96MV8 337 aa22.35■■□□□ 1.17
SMN2-213ENST00000614240 MRIQ9BWK5 157 aa22.35■■□□□ 1.17
SMN2-213ENST00000614240 ZFYVE28Q9HCC9 887 aa22.35■■□□□ 1.17
SMN2-213ENST00000614240 SLC5A1P13866 664 aa22.34■■□□□ 1.17
SMN2-213ENST00000614240 ARHGEF6Q15052 776 aa22.34■■□□□ 1.17
SMN2-213ENST00000614240 BRI3BPQ8WY22 251 aa22.34■■□□□ 1.17
SMN2-213ENST00000614240 SUGT1Q9Y2Z0 365 aa22.34■■□□□ 1.17
SMN2-213ENST00000614240 EYA2O00167 538 aa22.33■■□□□ 1.17
SMN2-213ENST00000614240 KIF16BQ96L93 1317 aa22.32■■□□□ 1.16
SMN2-213ENST00000614240 TNRC18O15417 2968 aaPredicted RBP22.32■■□□□ 1.16
SMN2-213ENST00000614240 APOBEC3HQ6NTF7 200 aaKnown RBP22.32■■□□□ 1.16
SMN2-213ENST00000614240 FAM83AQ86UY5 434 aa22.32■■□□□ 1.16
SMN2-213ENST00000614240 WDR66Q8TBY9 1149 aa22.32■■□□□ 1.16
SMN2-213ENST00000614240 WRNIP1Q96S55 665 aa22.32■■□□□ 1.16
SMN2-213ENST00000614240 SMC4Q9NTJ3 1288 aa22.32■■□□□ 1.16
SMN2-213ENST00000614240 ARAP2Q8WZ64 1704 aa22.31■■□□□ 1.16
SMN2-213ENST00000614240 SPDYE5A6NIY4 337 aa22.31■■□□□ 1.16
SMN2-213ENST00000614240 CETPP11597 493 aa22.31■■□□□ 1.16
SMN2-213ENST00000614240 FGFR2P21802 821 aa22.31■■□□□ 1.16
SMN2-213ENST00000614240 SLFN5Q08AF3 891 aa22.31■■□□□ 1.16
SMN2-213ENST00000614240 FKBP1CQ5VVH2 108 aa22.31■■□□□ 1.16
SMN2-213ENST00000614240 DCAF15Q66K64 600 aa22.31■■□□□ 1.16
SMN2-213ENST00000614240 HHIPL2Q6UWX4 724 aa22.31■■□□□ 1.16
SMN2-213ENST00000614240 ERO1BQ86YB8 467 aa22.31■■□□□ 1.16
SMN2-213ENST00000614240 LPIN2Q92539 896 aa22.31■■□□□ 1.16
SMN2-213ENST00000614240 POTEFA5A3E0 1075 aa22.3■■□□□ 1.16
SMN2-213ENST00000614240 ALDH1L2Q3SY69 923 aa22.3■■□□□ 1.16
SMN2-213ENST00000614240 FAM43AQ8N2R8 423 aa22.3■■□□□ 1.16
SMN2-213ENST00000614240 ZKSCAN4Q969J2 545 aaPredicted RBP22.3■■□□□ 1.16
SMN2-213ENST00000614240 OTOFQ9HC10 1997 aa22.29■■□□□ 1.16
SMN2-213ENST00000614240 UBTFL1P0CB47 393 aaPredicted RBP22.29■■□□□ 1.16
SMN2-213ENST00000614240 RFX5P48382 616 aaPredicted RBP22.29■■□□□ 1.16
SMN2-213ENST00000614240 SIL1Q9H173 461 aa22.29■■□□□ 1.16
SMN2-213ENST00000614240 GNL3LQ9NVN8 582 aaKnown RBP22.29■■□□□ 1.16
SMN2-213ENST00000614240 SNCAIPQ9Y6H5 919 aa22.29■■□□□ 1.16
SMN2-213ENST00000614240 SNAPC2Q13487 334 aa22.28■■□□□ 1.16
SMN2-213ENST00000614240 MIGA2Q7L4E1 593 aa22.28■■□□□ 1.16
SMN2-213ENST00000614240 ARMC5Q96C12 935 aa22.28■■□□□ 1.16
SMN2-213ENST00000614240 TMEM106CQ9BVX2 250 aa22.28■■□□□ 1.16
SMN2-213ENST00000614240 CEP126Q9P2H0 1117 aa22.28■■□□□ 1.16
SMN2-213ENST00000614240 LAMB1P07942 1786 aa22.27■■□□□ 1.16
SMN2-213ENST00000614240 KIF22Q14807 665 aa22.27■■□□□ 1.16
SMN2-213ENST00000614240 ATP2B3Q16720 1220 aa22.27■■□□□ 1.16
SMN2-213ENST00000614240 ZNF341Q9BYN7 854 aa22.27■■□□□ 1.16
SMN2-213ENST00000614240 IRF6O14896 467 aa22.26■■□□□ 1.15
SMN2-213ENST00000614240 TCP10Q12799 353 aa22.26■■□□□ 1.15
SMN2-213ENST00000614240 ATG9AQ7Z3C6 839 aa22.26■■□□□ 1.15
SMN2-213ENST00000614240 NBPF11Q86T75 865 aa22.26■■□□□ 1.15
SMN2-213ENST00000614240 CDCA7LQ96GN5 454 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms