RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 CHRNA5P30532 468 aa11.76□□□□□ -0.53
GGA3-221ENST00000614198 TMEM63CQ9P1W3 806 aa11.76□□□□□ -0.53
GGA3-221ENST00000614198 LRP5O75197 1615 aa11.75□□□□□ -0.53
GGA3-221ENST00000614198 ADRA2BP18089 450 aa11.75□□□□□ -0.53
GGA3-221ENST00000614198 CHAF1AQ13111 956 aaPredicted RBP11.75□□□□□ -0.53
GGA3-221ENST00000614198 NECTIN1Q15223 517 aa11.75□□□□□ -0.53
GGA3-221ENST00000614198 CREB3L3Q68CJ9 461 aa11.75□□□□□ -0.53
GGA3-221ENST00000614198 JAKMIP1Q96N16 626 aaKnown RBP11.75□□□□□ -0.53
GGA3-221ENST00000614198 CWC22Q9HCG8 908 aaKnown RBP11.75□□□□□ -0.53
GGA3-221ENST00000614198 MED23Q9ULK4 1368 aa11.75□□□□□ -0.53
GGA3-221ENST00000614198 GRIK5Q16478 980 aa11.75□□□□□ -0.53
GGA3-221ENST00000614198 SLC4A8Q2Y0W8 1093 aa11.75□□□□□ -0.53
GGA3-221ENST00000614198 MCMDC2Q4G0Z9 681 aa11.75□□□□□ -0.53
GGA3-221ENST00000614198 RPGRQ92834 1020 aaKnown RBP11.75□□□□□ -0.53
GGA3-221ENST00000614198 MAP4K1Q92918 833 aa11.75□□□□□ -0.53
GGA3-221ENST00000614198 PCNTO95613 3336 aa11.75□□□□□ -0.53
GGA3-221ENST00000614198 SLC27A2O14975 620 aa11.74□□□□□ -0.53
GGA3-221ENST00000614198 RNF113AO15541 343 aaKnown RBP11.74□□□□□ -0.53
GGA3-221ENST00000614198 LARGE1O95461 756 aa11.74□□□□□ -0.53
GGA3-221ENST00000614198 GPSM2P81274 684 aa11.74□□□□□ -0.53
GGA3-221ENST00000614198 EVX2Q03828 476 aa11.74□□□□□ -0.53
GGA3-221ENST00000614198 NOLC1Q14978 699 aaKnown RBP eCLIP11.74□□□□□ -0.535e-6■□□□□ 9.2
GGA3-221ENST00000614198 RABEP1Q15276 862 aa11.74□□□□□ -0.53
GGA3-221ENST00000614198 SLC15A2Q16348 729 aa11.74□□□□□ -0.53
GGA3-221ENST00000614198 ILDR1Q86SU0 546 aaPredicted RBP11.74□□□□□ -0.53
GGA3-221ENST00000614198 MAGEB6Q8N7X4 407 aa11.74□□□□□ -0.53
GGA3-221ENST00000614198 CGNQ9P2M7 1197 aaKnown RBP11.74□□□□□ -0.53
GGA3-221ENST00000614198 FBXO3Q9UK99 471 aa11.74□□□□□ -0.53
GGA3-221ENST00000614198 ZNF532Q9HCE3 1301 aa11.74□□□□□ -0.53
GGA3-221ENST00000614198 VPS37DQ86XT2 251 aa11.74□□□□□ -0.53
GGA3-221ENST00000614198 PRKAB2O43741 272 aa11.74□□□□□ -0.53
GGA3-221ENST00000614198 CYP21A2P08686 494 aa11.74□□□□□ -0.53
GGA3-221ENST00000614198 CERS3Q8IU89 383 aa11.74□□□□□ -0.53
GGA3-221ENST00000614198 RUFY2Q8WXA3 655 aa11.74□□□□□ -0.53
GGA3-221ENST00000614198 RIMBP2O15034 1052 aa11.73□□□□□ -0.53
GGA3-221ENST00000614198 HSPD1P10809 573 aaKnown RBP11.73□□□□□ -0.53
GGA3-221ENST00000614198 ST5P78524 1137 aa11.73□□□□□ -0.53
GGA3-221ENST00000614198 ZMYM1Q5SVZ6 1142 aa11.73□□□□□ -0.53
GGA3-221ENST00000614198 STOX1Q6ZVD7 989 aa11.73□□□□□ -0.53
GGA3-221ENST00000614198 PDCL2Q8N4E4 241 aa11.73□□□□□ -0.53
GGA3-221ENST00000614198 ZNF384Q8TF68 577 aa11.73□□□□□ -0.53
GGA3-221ENST00000614198 ARID4AP29374 1257 aaPredicted RBP11.73□□□□□ -0.53
GGA3-221ENST00000614198 GRAPQ13588 217 aa11.73□□□□□ -0.53
GGA3-221ENST00000614198 DHX37Q8IY37 1157 aaKnown RBP11.73□□□□□ -0.53
GGA3-221ENST00000614198 GRAPLQ8TC17 118 aaPredicted RBP11.73□□□□□ -0.53
GGA3-221ENST00000614198 SPTLC3Q9NUV7 552 aa11.73□□□□□ -0.53
GGA3-221ENST00000614198 A0A1B0GUL6 1792 aa11.72□□□□□ -0.53
GGA3-221ENST00000614198 RTL9Q8NET4 1388 aa11.72□□□□□ -0.53
GGA3-221ENST00000614198 PDE6AP16499 860 aa11.72□□□□□ -0.53
GGA3-221ENST00000614198 ZNF622Q969S3 477 aaKnown RBP eCLIP11.72□□□□□ -0.53
GGA3-221ENST00000614198 GPHNQ9NQX3 736 aaPredicted RBP11.72□□□□□ -0.53
GGA3-221ENST00000614198 POLLQ9UGP5 575 aa11.72□□□□□ -0.53
GGA3-221ENST00000614198 ZNF804BA4D1E1 1349 aa11.72□□□□□ -0.53
GGA3-221ENST00000614198 ANKRD31Q8N7Z5 1873 aa11.72□□□□□ -0.53
GGA3-221ENST00000614198 MBD3O95983 291 aa11.72□□□□□ -0.53
GGA3-221ENST00000614198 AK2P54819 239 aa11.72□□□□□ -0.53
GGA3-221ENST00000614198 ARMT1Q9H993 441 aa11.72□□□□□ -0.53
GGA3-221ENST00000614198 CACNA1SQ13698 1873 aa11.72□□□□□ -0.53
GGA3-221ENST00000614198 SPDYE4A6NLX3 237 aa11.72□□□□□ -0.53
GGA3-221ENST00000614198 GPAA1O43292 621 aa11.72□□□□□ -0.53
GGA3-221ENST00000614198 ZBTB7AO95365 584 aa11.72□□□□□ -0.53
GGA3-221ENST00000614198 PRDX5P30044 214 aa11.72□□□□□ -0.53
GGA3-221ENST00000614198 MXD3Q9BW11 206 aa11.72□□□□□ -0.53
GGA3-221ENST00000614198 ST18O60284 1047 aa11.71□□□□□ -0.53
GGA3-221ENST00000614198 CRY2Q49AN0 593 aa11.71□□□□□ -0.53
GGA3-221ENST00000614198 NECAB1Q8N987 351 aa11.71□□□□□ -0.53
GGA3-221ENST00000614198 TMX3Q96JJ7 454 aa11.71□□□□□ -0.53
GGA3-221ENST00000614198 FEZ1Q99689 392 aa11.71□□□□□ -0.53
GGA3-221ENST00000614198 TSPY26PQ9H489 355 aa11.71□□□□□ -0.53
GGA3-221ENST00000614198 LRP2BPQ9P2M1 347 aa11.71□□□□□ -0.53
GGA3-221ENST00000614198 APPP05067 770 aa11.71□□□□□ -0.54
GGA3-221ENST00000614198 MCCP23508 829 aa11.71□□□□□ -0.54
GGA3-221ENST00000614198 RUFY3Q7L099 469 aa11.71□□□□□ -0.54
GGA3-221ENST00000614198 ANKRD7Q92527 254 aa11.71□□□□□ -0.54
GGA3-221ENST00000614198 KCNQ5Q9NR82 932 aa11.71□□□□□ -0.54
GGA3-221ENST00000614198 ZDHHC9Q9Y397 364 aa11.71□□□□□ -0.54
GGA3-221ENST00000614198 TCRBV5S4A2TA0A5A2 114 aa11.7□□□□□ -0.54
GGA3-221ENST00000614198 ADD2P35612 726 aa11.7□□□□□ -0.54
GGA3-221ENST00000614198 DYNLL1P63167 89 aaKnown RBP11.7□□□□□ -0.54
GGA3-221ENST00000614198 STK3Q13188 491 aa11.7□□□□□ -0.54
GGA3-221ENST00000614198 RAB11FIP4Q86YS3 637 aa11.7□□□□□ -0.54
GGA3-221ENST00000614198 NLGN1Q8N2Q7 840 aa11.7□□□□□ -0.54
GGA3-221ENST00000614198 C17orf53Q8N3J3 647 aaPredicted RBP11.7□□□□□ -0.54
GGA3-221ENST00000614198 UFL1O94874 794 aa11.7□□□□□ -0.54
GGA3-221ENST00000614198 SDR42E1Q8WUS8 393 aa11.7□□□□□ -0.54
GGA3-221ENST00000614198 RAI14Q9P0K7 980 aa11.7□□□□□ -0.54
GGA3-221ENST00000614198 ATF5Q9Y2D1 282 aaPredicted RBP11.7□□□□□ -0.54
GGA3-221ENST00000614198 PARP3Q9Y6F1 533 aa11.7□□□□□ -0.54
GGA3-221ENST00000614198 FGAP02671 866 aa11.7□□□□□ -0.54
GGA3-221ENST00000614198 LCORLQ8N3X6 602 aa11.7□□□□□ -0.54
GGA3-221ENST00000614198 ZFP91Q96JP5 570 aaPredicted RBP11.7□□□□□ -0.54
GGA3-221ENST00000614198 GDPD2Q9HCC8 539 aa11.7□□□□□ -0.54
GGA3-221ENST00000614198 C6orf229H3BNL8 230 aa11.69□□□□□ -0.54
GGA3-221ENST00000614198 SRGNP10124 158 aa11.69□□□□□ -0.54
GGA3-221ENST00000614198 HSP90B1P14625 803 aaKnown RBP11.69□□□□□ -0.54
GGA3-221ENST00000614198 SF3B2Q13435 895 aaKnown RBP11.69□□□□□ -0.54
GGA3-221ENST00000614198 TAOK2Q9UL54 1235 aa11.69□□□□□ -0.54
GGA3-221ENST00000614198 HIP1O00291 1037 aa11.69□□□□□ -0.54
GGA3-221ENST00000614198 MBD4O95243 580 aa11.69□□□□□ -0.54
GGA3-221ENST00000614198 HIBADHP31937 336 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms