RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 SPECC1LQ69YQ0 1117 aa16.63■□□□□ 0.25
VPS36-207ENST00000611132 MED14O60244 1454 aa16.63■□□□□ 0.25
VPS36-207ENST00000611132 EIF4A1P60842 406 aaKnown RBP16.63■□□□□ 0.25
VPS36-207ENST00000611132 DHX37Q8IY37 1157 aaKnown RBP16.63■□□□□ 0.25
VPS36-207ENST00000611132 TMX4Q9H1E5 349 aaPredicted RBP16.63■□□□□ 0.25
VPS36-207ENST00000611132 BCCIPQ9P287 314 aaKnown RBP eCLIP16.63■□□□□ 0.25
VPS36-207ENST00000611132 TACC1O75410 805 aa16.63■□□□□ 0.25
VPS36-207ENST00000611132 KIF5AQ12840 1032 aa16.63■□□□□ 0.25
VPS36-207ENST00000611132 PPP2R2CQ9Y2T4 447 aa16.63■□□□□ 0.25
VPS36-207ENST00000611132 TIMM10P62072 90 aa16.63■□□□□ 0.25
VPS36-207ENST00000611132 RNMTO43148 476 aaKnown RBP16.62■□□□□ 0.25
VPS36-207ENST00000611132 PFKFB1P16118 471 aa16.62■□□□□ 0.25
VPS36-207ENST00000611132 DNAJC21Q5F1R6 531 aaKnown RBP16.62■□□□□ 0.25
VPS36-207ENST00000611132 IL17REQ8NFR9 667 aa16.62■□□□□ 0.25
VPS36-207ENST00000611132 PPM1EQ8WY54 764 aa16.62■□□□□ 0.25
VPS36-207ENST00000611132 LRRC59Q96AG4 307 aaKnown RBP16.62■□□□□ 0.25
VPS36-207ENST00000611132 MKRN1Q9UHC7 482 aaKnown RBP16.62■□□□□ 0.25
VPS36-207ENST00000611132 LUC7L2Q9Y383 392 aaKnown RBP16.62■□□□□ 0.25
VPS36-207ENST00000611132 SLC5A1P13866 664 aa16.62■□□□□ 0.25
VPS36-207ENST00000611132 IFFO1Q0D2I5 559 aa16.62■□□□□ 0.25
VPS36-207ENST00000611132 LGR6Q9HBX8 967 aa16.62■□□□□ 0.25
VPS36-207ENST00000611132 RCOR1Q9UKL0 485 aa16.62■□□□□ 0.25
VPS36-207ENST00000611132 CLTCL1P53675 1640 aa16.62■□□□□ 0.25
VPS36-207ENST00000611132 STARD3NLO95772 234 aa16.62■□□□□ 0.25
VPS36-207ENST00000611132 ZSCAN20P17040 1043 aaPredicted RBP16.62■□□□□ 0.25
VPS36-207ENST00000611132 IGHMBP2P38935 993 aaKnown RBP16.62■□□□□ 0.25
VPS36-207ENST00000611132 OTUD6BQ8N6M0 293 aa16.62■□□□□ 0.25
VPS36-207ENST00000611132 PI4K2BQ8TCG2 481 aa16.62■□□□□ 0.25
VPS36-207ENST00000611132 ZNF274Q96GC6 653 aaPredicted RBP16.62■□□□□ 0.25
VPS36-207ENST00000611132 DRC1Q96MC2 740 aa16.62■□□□□ 0.25
VPS36-207ENST00000611132 SHROOM2Q13796 1616 aa16.62■□□□□ 0.25
VPS36-207ENST00000611132 NAA30Q147X3 362 aaPredicted RBP16.62■□□□□ 0.25
VPS36-207ENST00000611132 CCDC178Q5BJE1 867 aa16.62■□□□□ 0.25
VPS36-207ENST00000611132 CLCN6P51797 869 aa16.61■□□□□ 0.25
VPS36-207ENST00000611132 UBXN1Q04323 297 aa16.61■□□□□ 0.25
VPS36-207ENST00000611132 RILPL1Q5EBL4 403 aa16.61■□□□□ 0.25
VPS36-207ENST00000611132 TSG101Q99816 390 aa16.61■□□□□ 0.25
VPS36-207ENST00000611132 CFAP74Q9C0B2 1584 aa16.61■□□□□ 0.25
VPS36-207ENST00000611132 E7EWF7 191 aa16.61■□□□□ 0.25
VPS36-207ENST00000611132 NDUFA8P51970 172 aa16.61■□□□□ 0.25
VPS36-207ENST00000611132 A0A1W2PQ27 194 aa16.61■□□□□ 0.25
VPS36-207ENST00000611132 A0A1W2PQ64 194 aa16.61■□□□□ 0.25
VPS36-207ENST00000611132 A0A1W2PQD8 194 aa16.61■□□□□ 0.25
VPS36-207ENST00000611132 PSMA7O14818 248 aa16.61■□□□□ 0.25
VPS36-207ENST00000611132 CCDC122Q5T0U0 273 aa16.61■□□□□ 0.25
VPS36-207ENST00000611132 SARM1Q6SZW1 724 aa16.61■□□□□ 0.25
VPS36-207ENST00000611132 ATRIPQ8WXE1 791 aa16.61■□□□□ 0.25
VPS36-207ENST00000611132 TAF5LO75529 589 aa16.6■□□□□ 0.25
VPS36-207ENST00000611132 ADKP55263 362 aaKnown RBP16.6■□□□□ 0.25
VPS36-207ENST00000611132 ANKLE2Q86XL3 938 aa16.6■□□□□ 0.25
VPS36-207ENST00000611132 TTC14Q96N46 770 aa16.6■□□□□ 0.25
VPS36-207ENST00000611132 DSCC1Q9BVC3 393 aa16.6■□□□□ 0.25
VPS36-207ENST00000611132 TCP11L1Q9NUJ3 509 aa16.6■□□□□ 0.25
VPS36-207ENST00000611132 A0A087WWV3 80 aa16.6■□□□□ 0.25
VPS36-207ENST00000611132 POLR2DO15514 142 aaKnown RBP16.6■□□□□ 0.25
VPS36-207ENST00000611132 UQCRFS1P1P0C7P4 283 aa16.6■□□□□ 0.25
VPS36-207ENST00000611132 SCRN1Q12765 414 aa16.6■□□□□ 0.25
VPS36-207ENST00000611132 NECTIN1Q15223 517 aa16.6■□□□□ 0.25
VPS36-207ENST00000611132 ENOX2Q16206 610 aaKnown RBP16.6■□□□□ 0.25
VPS36-207ENST00000611132 STRN4Q9NRL3 753 aa16.6■□□□□ 0.25
VPS36-207ENST00000611132 E9PCH4 1651 aa16.6■□□□□ 0.25
VPS36-207ENST00000611132 CCT6AP40227 531 aaKnown RBP16.6■□□□□ 0.25
VPS36-207ENST00000611132 ARID5BQ14865 1188 aa16.6■□□□□ 0.25
VPS36-207ENST00000611132 SPECC1Q5M775 1068 aa16.6■□□□□ 0.25
VPS36-207ENST00000611132 RABGGTAQ92696 567 aa16.6■□□□□ 0.25
VPS36-207ENST00000611132 CMA1P23946 247 aa16.6■□□□□ 0.25
VPS36-207ENST00000611132 PLA2G4DQ86XP0 818 aa16.6■□□□□ 0.25
VPS36-207ENST00000611132 GOLGA5Q8TBA6 731 aa16.6■□□□□ 0.25
VPS36-207ENST00000611132 ANGEL1Q9UNK9 670 aaKnown RBP16.6■□□□□ 0.25
VPS36-207ENST00000611132 STAT6P42226 847 aa16.59■□□□□ 0.25
VPS36-207ENST00000611132 PNOCQ13519 176 aa16.59■□□□□ 0.25
VPS36-207ENST00000611132 DPCR1Q3MIW9 517 aa16.59■□□□□ 0.25
VPS36-207ENST00000611132 KRT40Q6A162 431 aa16.59■□□□□ 0.25
VPS36-207ENST00000611132 TMTC1Q8IUR5 882 aa16.59■□□□□ 0.25
VPS36-207ENST00000611132 METTL22Q9BUU2 404 aaPredicted RBP16.59■□□□□ 0.25
VPS36-207ENST00000611132 KCNF1Q9H3M0 494 aa16.59■□□□□ 0.25
VPS36-207ENST00000611132 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.59■□□□□ 0.25
VPS36-207ENST00000611132 MORC2Q9Y6X9 1032 aaPredicted RBP16.59■□□□□ 0.25
VPS36-207ENST00000611132 IQSEC2Q5JU85 1478 aa16.59■□□□□ 0.25
VPS36-207ENST00000611132 REREQ9P2R6 1566 aa16.59■□□□□ 0.25
VPS36-207ENST00000611132 TET3O43151 1660 aa16.59■□□□□ 0.25
VPS36-207ENST00000611132 ATP7BP35670 1465 aa16.59■□□□□ 0.25
VPS36-207ENST00000611132 FCHSD1Q86WN1 690 aa16.59■□□□□ 0.25
VPS36-207ENST00000611132 TNRQ92752 1358 aa16.59■□□□□ 0.25
VPS36-207ENST00000611132 CCDC42Q96M95 316 aa16.59■□□□□ 0.25
VPS36-207ENST00000611132 PHLPP2Q6ZVD8 1323 aa16.59■□□□□ 0.25
VPS36-207ENST00000611132 AMPD3Q01432 767 aa16.59■□□□□ 0.25
VPS36-207ENST00000611132 SLFNL1Q499Z3 407 aa16.59■□□□□ 0.25
VPS36-207ENST00000611132 TRMT112Q9UI30 125 aaKnown RBP16.59■□□□□ 0.25
VPS36-207ENST00000611132 SEC31AO94979 1220 aaKnown RBP16.58■□□□□ 0.25
VPS36-207ENST00000611132 PLCD4Q9BRC7 762 aa16.58■□□□□ 0.25
VPS36-207ENST00000611132 DESI2Q9BSY9 194 aa16.58■□□□□ 0.25
VPS36-207ENST00000611132 PRDM11Q9NQV5 511 aa16.58■□□□□ 0.25
VPS36-207ENST00000611132 PNMA6AP0CW24 399 aaPredicted RBP16.58■□□□□ 0.25
VPS36-207ENST00000611132 POSTNQ15063 836 aa16.58■□□□□ 0.25
VPS36-207ENST00000611132 CYP26C1Q6V0L0 522 aa16.58■□□□□ 0.25
VPS36-207ENST00000611132 IP6K1Q92551 441 aa16.58■□□□□ 0.25
VPS36-207ENST00000611132 SEC62Q99442 399 aaKnown RBP16.58■□□□□ 0.25
VPS36-207ENST00000611132 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.58■□□□□ 0.25
VPS36-207ENST00000611132 RTEL1Q9NZ71 1219 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms