RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 ZPR1O75312 459 aa14.04□□□□□ -0.16
USP6NL-206ENST00000609853 CTDNEP1O95476 244 aa14.04□□□□□ -0.16
USP6NL-206ENST00000609853 APPP05067 770 aa14.04□□□□□ -0.16
USP6NL-206ENST00000609853 GTF2E1P29083 439 aaPredicted RBP14.04□□□□□ -0.16
USP6NL-206ENST00000609853 UVSSAQ2YD98 709 aa14.04□□□□□ -0.16
USP6NL-206ENST00000609853 HS1BP3Q53T59 392 aa14.04□□□□□ -0.16
USP6NL-206ENST00000609853 TMED8Q6PL24 325 aaPredicted RBP14.04□□□□□ -0.16
USP6NL-206ENST00000609853 FERMT3Q86UX7 667 aa14.04□□□□□ -0.16
USP6NL-206ENST00000609853 MAGEB6Q8N7X4 407 aa14.04□□□□□ -0.16
USP6NL-206ENST00000609853 TMEM87BQ96K49 555 aa14.04□□□□□ -0.16
USP6NL-206ENST00000609853 SPATA32Q96LK8 384 aa14.04□□□□□ -0.16
USP6NL-206ENST00000609853 NACAP1Q9BZK3 213 aa14.04□□□□□ -0.16
USP6NL-206ENST00000609853 CHD4Q14839 1912 aa14.04□□□□□ -0.16
USP6NL-206ENST00000609853 TAF1LQ8IZX4 1826 aa14.03□□□□□ -0.16
USP6NL-206ENST00000609853 GOLGA6L4A6NEF3 574 aa14.03□□□□□ -0.16
USP6NL-206ENST00000609853 SEMA3EO15041 775 aa14.03□□□□□ -0.16
USP6NL-206ENST00000609853 TTC6Q86TZ1 520 aa14.03□□□□□ -0.16
USP6NL-206ENST00000609853 CNNM2Q9H8M5 875 aa14.03□□□□□ -0.16
USP6NL-206ENST00000609853 RTCBQ9Y3I0 505 aaKnown RBP14.03□□□□□ -0.16
USP6NL-206ENST00000609853 BCAMP50895 628 aa14.02□□□□□ -0.16
USP6NL-206ENST00000609853 CAVIN4Q5BKX8 364 aa14.02□□□□□ -0.16
USP6NL-206ENST00000609853 TPTE2Q6XPS3 522 aa14.02□□□□□ -0.16
USP6NL-206ENST00000609853 LEO1Q8WVC0 666 aaPredicted RBP14.02□□□□□ -0.16
USP6NL-206ENST00000609853 DDX11Q96FC9 970 aa14.02□□□□□ -0.16
USP6NL-206ENST00000609853 PDLIM2Q96JY6 352 aa14.02□□□□□ -0.16
USP6NL-206ENST00000609853 NLRP3Q96P20 1036 aa14.02□□□□□ -0.16
USP6NL-206ENST00000609853 MTA3Q9BTC8 594 aa14.02□□□□□ -0.16
USP6NL-206ENST00000609853 CCNL1Q9UK58 526 aaPredicted RBP14.02□□□□□ -0.16
USP6NL-206ENST00000609853 ANGEL1Q9UNK9 670 aaKnown RBP14.02□□□□□ -0.16
USP6NL-206ENST00000609853 SBF2Q86WG5 1849 aa14.02□□□□□ -0.17
USP6NL-206ENST00000609853 PDS5AQ29RF7 1337 aaKnown RBP14.02□□□□□ -0.17
USP6NL-206ENST00000609853 KLF18A0A0U1RQI7 1052 aa14.01□□□□□ -0.17
USP6NL-206ENST00000609853 ONECUT3O60422 494 aaPredicted RBP14.01□□□□□ -0.17
USP6NL-206ENST00000609853 IGSF3O75054 1194 aa14.01□□□□□ -0.17
USP6NL-206ENST00000609853 ANTXR2P58335 489 aa14.01□□□□□ -0.17
USP6NL-206ENST00000609853 CCT2P78371 535 aaKnown RBP14.01□□□□□ -0.17
USP6NL-206ENST00000609853 TBC1D9BQ66K14 1250 aa14.01□□□□□ -0.17
USP6NL-206ENST00000609853 CHST3Q7LGC8 479 aa14.01□□□□□ -0.17
USP6NL-206ENST00000609853 IFNL3Q8IZI9 196 aa14.01□□□□□ -0.17
USP6NL-206ENST00000609853 ZNF396Q96N95 335 aaPredicted RBP14.01□□□□□ -0.17
USP6NL-206ENST00000609853 ANKRD2Q9GZV1 360 aa14.01□□□□□ -0.17
USP6NL-206ENST00000609853 NAPBQ9H115 298 aa14.01□□□□□ -0.17
USP6NL-206ENST00000609853 BCL2L12Q9HB09 334 aa14.01□□□□□ -0.17
USP6NL-206ENST00000609853 NAP1L2Q9ULW6 460 aaPredicted RBP14.01□□□□□ -0.17
USP6NL-206ENST00000609853 TIAM2Q8IVF5 1701 aa14.01□□□□□ -0.17
USP6NL-206ENST00000609853 CDKL5O76039 1030 aa14.01□□□□□ -0.17
USP6NL-206ENST00000609853 MBD4O95243 580 aa14.01□□□□□ -0.17
USP6NL-206ENST00000609853 NBPF5PQ86XG9 351 aaPredicted RBP14.01□□□□□ -0.17
USP6NL-206ENST00000609853 GJD4Q96KN9 370 aaPredicted RBP14.01□□□□□ -0.17
USP6NL-206ENST00000609853 KRT23Q9C075 422 aa14.01□□□□□ -0.17
USP6NL-206ENST00000609853 NBPF3Q9H094 633 aa14.01□□□□□ -0.17
USP6NL-206ENST00000609853 DDX19AQ9NUU7 478 aaKnown RBP14.01□□□□□ -0.17
USP6NL-206ENST00000609853 LRP2BPQ9P2M1 347 aa14.01□□□□□ -0.17
USP6NL-206ENST00000609853 DENND2AQ9ULE3 1009 aa14.01□□□□□ -0.17
USP6NL-206ENST00000609853 MINPP1Q9UNW1 487 aa14.01□□□□□ -0.17
USP6NL-206ENST00000609853 GOLGA8BA8MQT2 603 aa14□□□□□ -0.17
USP6NL-206ENST00000609853 CPLX1O14810 134 aa14□□□□□ -0.17
USP6NL-206ENST00000609853 GNPATO15228 680 aa14□□□□□ -0.17
USP6NL-206ENST00000609853 HMGB2P26583 209 aaKnown RBP14□□□□□ -0.17
USP6NL-206ENST00000609853 RPS8P62241 208 aaKnown RBP14□□□□□ -0.17
USP6NL-206ENST00000609853 CPLX2Q6PUV4 134 aaKnown RBP14□□□□□ -0.17
USP6NL-206ENST00000609853 NCOA5Q9HCD5 579 aaKnown RBP14□□□□□ -0.17
USP6NL-206ENST00000609853 SH2B2O14492 632 aaPredicted RBP13.99□□□□□ -0.17
USP6NL-206ENST00000609853 LIFRP42702 1097 aa13.99□□□□□ -0.17
USP6NL-206ENST00000609853 SGMS1Q86VZ5 419 aa13.99□□□□□ -0.17
USP6NL-206ENST00000609853 TBC1D10CQ8IV04 446 aa13.99□□□□□ -0.17
USP6NL-206ENST00000609853 RNF41Q9H4P4 317 aaPredicted RBP13.99□□□□□ -0.17
USP6NL-206ENST00000609853 RCOR1Q9UKL0 485 aa13.99□□□□□ -0.17
USP6NL-206ENST00000609853 HPS5Q9UPZ3 1129 aa13.99□□□□□ -0.17
USP6NL-206ENST00000609853 GSG1L2A8MUP6 293 aa13.98□□□□□ -0.17
USP6NL-206ENST00000609853 SNAP23O00161 211 aa13.98□□□□□ -0.17
USP6NL-206ENST00000609853 DTNBO60941 627 aa13.98□□□□□ -0.17
USP6NL-206ENST00000609853 VPS37DQ86XT2 251 aa13.98□□□□□ -0.17
USP6NL-206ENST00000609853 ESPNB1AK53 854 aa13.98□□□□□ -0.17
USP6NL-206ENST00000609853 FDPSP14324 419 aaKnown RBP13.98□□□□□ -0.17
USP6NL-206ENST00000609853 AKNAD1Q5T1N1 836 aa13.98□□□□□ -0.17
USP6NL-206ENST00000609853 MEX3CQ5U5Q3 659 aaKnown RBP13.98□□□□□ -0.17
USP6NL-206ENST00000609853 FAM173BQ6P4H8 233 aa13.98□□□□□ -0.17
USP6NL-206ENST00000609853 BICDL1Q6ZP65 573 aa13.98□□□□□ -0.17
USP6NL-206ENST00000609853 C3orf67Q6ZVT6 689 aa13.98□□□□□ -0.17
USP6NL-206ENST00000609853 FBXO33Q7Z6M2 555 aa13.98□□□□□ -0.17
USP6NL-206ENST00000609853 STAG1Q8WVM7 1258 aa13.98□□□□□ -0.17
USP6NL-206ENST00000609853 NUP62CLQ9H1M0 184 aa13.98□□□□□ -0.17
USP6NL-206ENST00000609853 ARMT1Q9H993 441 aa13.98□□□□□ -0.17
USP6NL-206ENST00000609853 EPB41L4AQ9HCS5 686 aaPredicted RBP13.98□□□□□ -0.17
USP6NL-206ENST00000609853 TFIP11Q9UBB9 837 aaKnown RBP13.98□□□□□ -0.17
USP6NL-206ENST00000609853 C4AP0C0L4 1744 aa13.97□□□□□ -0.17
USP6NL-206ENST00000609853 C4BP0C0L5 1744 aa13.97□□□□□ -0.17
USP6NL-206ENST00000609853 MYH13Q9UKX3 1938 aa13.97□□□□□ -0.17
USP6NL-206ENST00000609853 CCDC192P0DO97 292 aa13.97□□□□□ -0.17
USP6NL-206ENST00000609853 ADD1P35611 737 aaKnown RBP13.97□□□□□ -0.17
USP6NL-206ENST00000609853 RCAN1P53805 252 aa13.97□□□□□ -0.17
USP6NL-206ENST00000609853 SART3Q15020 963 aaKnown RBP13.97□□□□□ -0.17
USP6NL-206ENST00000609853 MAP3K11Q16584 847 aa13.97□□□□□ -0.17
USP6NL-206ENST00000609853 TRAPPC3LQ5T215 181 aa13.97□□□□□ -0.17
USP6NL-206ENST00000609853 MFSD6Q6ZSS7 791 aa13.97□□□□□ -0.17
USP6NL-206ENST00000609853 BRAPQ7Z569 592 aa13.97□□□□□ -0.17
USP6NL-206ENST00000609853 TMTC2Q8N394 836 aa13.97□□□□□ -0.17
USP6NL-206ENST00000609853 FBXO18Q8NFZ0 1043 aa13.97□□□□□ -0.17
USP6NL-206ENST00000609853 IGDCC4Q8TDY8 1250 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms