RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, human

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHANK2-219	ENST00000606715	PLVAP	Q9BX97	442 aa		12.52	□□□□□ -0.4
SHANK2-219	ENST00000606715	GTPBP4	Q9BZE4	634 aa	Known RBP	12.52	□□□□□ -0.4
SHANK2-219	ENST00000606715	RMND1	Q9NWS8	449 aa		12.52	□□□□□ -0.4
SHANK2-219	ENST00000606715	PCDHB15	Q9Y5E8	787 aa		12.52	□□□□□ -0.4
SHANK2-219	ENST00000606715	MET	P08581	1390 aa		12.52	□□□□□ -0.4
SHANK2-219	ENST00000606715	UQCRH	P07919	91 aa		12.52	□□□□□ -0.41
SHANK2-219	ENST00000606715	PHKG2	P15735	406 aa		12.52	□□□□□ -0.41
SHANK2-219	ENST00000606715	SMC1A	Q14683	1233 aa	Known RBP	12.52	□□□□□ -0.41
SHANK2-219	ENST00000606715	TRIM47	Q96LD4	638 aa		12.52	□□□□□ -0.41
SHANK2-219	ENST00000606715	KIF1B	O60333	1816 aa		12.52	□□□□□ -0.41
SHANK2-219	ENST00000606715	SMC5	Q8IY18	1101 aa		12.52	□□□□□ -0.41
SHANK2-219	ENST00000606715	BRF1	Q92994	677 aa		12.52	□□□□□ -0.41
SHANK2-219	ENST00000606715	NAP1L4	Q99733	375 aa	Known RBP	12.52	□□□□□ -0.41
SHANK2-219	ENST00000606715	PA2G4	Q9UQ80	394 aa	Known RBP	12.52	□□□□□ -0.41
SHANK2-219	ENST00000606715	MROH5	Q6ZUA9	1318 aa		12.52	□□□□□ -0.41
SHANK2-219	ENST00000606715	STAT6	P42226	847 aa		12.52	□□□□□ -0.41
SHANK2-219	ENST00000606715	KIF4B	Q2VIQ3	1234 aa		12.52	□□□□□ -0.41
SHANK2-219	ENST00000606715	AKNAD1	Q5T1N1	836 aa		12.52	□□□□□ -0.41
SHANK2-219	ENST00000606715	UNC5CL	Q8IV45	518 aa		12.52	□□□□□ -0.41
SHANK2-219	ENST00000606715	TTC12	Q9H892	705 aa	Predicted RBP	12.52	□□□□□ -0.41
SHANK2-219	ENST00000606715	KRT27	Q7Z3Y8	459 aa		12.51	□□□□□ -0.41
SHANK2-219	ENST00000606715	DNAJC10	Q8IXB1	793 aa		12.51	□□□□□ -0.41
SHANK2-219	ENST00000606715	HELB	Q8NG08	1087 aa	Predicted RBP	12.51	□□□□□ -0.41
SHANK2-219	ENST00000606715	TBC1D22A	Q8WUA7	517 aa		12.51	□□□□□ -0.41
SHANK2-219	ENST00000606715	SPAG5	Q96R06	1193 aa		12.51	□□□□□ -0.41
SHANK2-219	ENST00000606715	SLC5A4	Q9NY91	659 aa		12.51	□□□□□ -0.41
SHANK2-219	ENST00000606715	MAP3K4	Q9Y6R4	1608 aa		12.51	□□□□□ -0.41
SHANK2-219	ENST00000606715	EIF4A1	P60842	406 aa	Known RBP	12.51	□□□□□ -0.41
SHANK2-219	ENST00000606715	GINS2	Q9Y248	185 aa		12.51	□□□□□ -0.41
SHANK2-219	ENST00000606715	SPATA31E1	Q6ZUB1	1445 aa		12.51	□□□□□ -0.41
SHANK2-219	ENST00000606715	BMS1	Q14692	1282 aa	Known RBP	12.51	□□□□□ -0.41
SHANK2-219	ENST00000606715	FAM89A	Q96GI7	184 aa		12.51	□□□□□ -0.41
SHANK2-219	ENST00000606715	GBP3	Q9H0R5	595 aa		12.51	□□□□□ -0.41
SHANK2-219	ENST00000606715	LGR6	Q9HBX8	967 aa		12.51	□□□□□ -0.41
SHANK2-219	ENST00000606715	ABCA9	Q8IUA7	1624 aa		12.51	□□□□□ -0.41
SHANK2-219	ENST00000606715	IRX3	P78415	501 aa	Predicted RBP	12.51	□□□□□ -0.41
SHANK2-219	ENST00000606715	TBC1D32	Q96NH3	1257 aa		12.51	□□□□□ -0.41
SHANK2-219	ENST00000606715	SLC8A3	P57103	927 aa		12.51	□□□□□ -0.41
SHANK2-219	ENST00000606715	IFI16	Q16666	785 aa	Known RBP	12.51	□□□□□ -0.41
SHANK2-219	ENST00000606715	SPECC1	Q5M775	1068 aa		12.51	□□□□□ -0.41
SHANK2-219	ENST00000606715	NAA15	Q9BXJ9	866 aa	Known RBP	12.51	□□□□□ -0.41
SHANK2-219	ENST00000606715	PKD2L1	Q9P0L9	805 aa		12.51	□□□□□ -0.41
SHANK2-219	ENST00000606715	SYNM	O15061	1565 aa		12.5	□□□□□ -0.41
SHANK2-219	ENST00000606715	MAGEB6	Q8N7X4	407 aa		12.5	□□□□□ -0.41
SHANK2-219	ENST00000606715	LPIN2	Q92539	896 aa		12.5	□□□□□ -0.41
SHANK2-219	ENST00000606715	CEP83	Q9Y592	693 aa		12.5	□□□□□ -0.41
SHANK2-219	ENST00000606715	TEX11	Q8IYF3	940 aa		12.5	□□□□□ -0.41
SHANK2-219	ENST00000606715	ZNF496	Q96IT1	587 aa	Predicted RBP	12.5	□□□□□ -0.41
SHANK2-219	ENST00000606715	TRIM6	Q9C030	488 aa	Predicted RBP	12.5	□□□□□ -0.41
SHANK2-219	ENST00000606715	BCCIP	Q9P287	314 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
SHANK2-219	ENST00000606715	CASQ1	P31415	396 aa		12.5	□□□□□ -0.41
SHANK2-219	ENST00000606715	NLGN1	Q8N2Q7	840 aa		12.5	□□□□□ -0.41
SHANK2-219	ENST00000606715	MIGA1	Q8NAN2	632 aa		12.5	□□□□□ -0.41
SHANK2-219	ENST00000606715	CEP63	Q96MT8	703 aa		12.5	□□□□□ -0.41
SHANK2-219	ENST00000606715	NACA2	Q9H009	215 aa		12.5	□□□□□ -0.41
SHANK2-219	ENST00000606715	CCDC171	Q6TFL3	1326 aa		12.5	□□□□□ -0.41
SHANK2-219	ENST00000606715	NMI	Q13287	307 aa	Predicted RBP	12.5	□□□□□ -0.41
SHANK2-219	ENST00000606715	KRT24	Q2M2I5	525 aa		12.5	□□□□□ -0.41
SHANK2-219	ENST00000606715	RBM28	Q9NW13	759 aa	Known RBP	12.5	□□□□□ -0.41
SHANK2-219	ENST00000606715	SH3BP5	O60239	455 aa		12.49	□□□□□ -0.41
SHANK2-219	ENST00000606715	CSAD	Q9Y600	493 aa		12.49	□□□□□ -0.41
SHANK2-219	ENST00000606715	PPFIA3	O75145	1194 aa		12.49	□□□□□ -0.41
SHANK2-219	ENST00000606715	GCKR	Q14397	625 aa		12.49	□□□□□ -0.41
SHANK2-219	ENST00000606715	HLTF	Q14527	1009 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
SHANK2-219	ENST00000606715	KMT5B	Q4FZB7	885 aa		12.49	□□□□□ -0.41
SHANK2-219	ENST00000606715	KRT79	Q5XKE5	535 aa		12.49	□□□□□ -0.41
SHANK2-219	ENST00000606715	ARHGEF25	Q86VW2	580 aa		12.49	□□□□□ -0.41
SHANK2-219	ENST00000606715	GNA11	P29992	359 aa		12.49	□□□□□ -0.41
SHANK2-219	ENST00000606715	CCDC102B	Q68D86	513 aa		12.49	□□□□□ -0.41
SHANK2-219	ENST00000606715	KCNG4	Q8TDN1	519 aa		12.49	□□□□□ -0.41
SHANK2-219	ENST00000606715	KIF2A	O00139	706 aa	Predicted RBP	12.49	□□□□□ -0.41
SHANK2-219	ENST00000606715	ZBTB7B	O15156	539 aa	Predicted RBP	12.49	□□□□□ -0.41
SHANK2-219	ENST00000606715	GJC1	P36383	396 aa		12.49	□□□□□ -0.41
SHANK2-219	ENST00000606715	MAP9	Q49MG5	647 aa		12.49	□□□□□ -0.41
SHANK2-219	ENST00000606715	DDX12P	Q92771	950 aa		12.49	□□□□□ -0.41
SHANK2-219	ENST00000606715	RNF34	Q969K3	372 aa		12.49	□□□□□ -0.41
SHANK2-219	ENST00000606715	DDX23	Q9BUQ8	820 aa	Known RBP	12.49	□□□□□ -0.41
SHANK2-219	ENST00000606715	TRIM35	Q9UPQ4	493 aa		12.49	□□□□□ -0.41
SHANK2-219	ENST00000606715		A0A1B0GUL7	405 aa		12.49	□□□□□ -0.41
SHANK2-219	ENST00000606715	A1BG	P04217	495 aa		12.49	□□□□□ -0.41
SHANK2-219	ENST00000606715	EEF2	P13639	858 aa	Known RBP	12.49	□□□□□ -0.41
SHANK2-219	ENST00000606715	TSHZ3	Q63HK5	1081 aa		12.49	□□□□□ -0.41
SHANK2-219	ENST00000606715	ALG1	Q9BT22	464 aa		12.49	□□□□□ -0.41
SHANK2-219	ENST00000606715	SAP30BP	Q9UHR5	308 aa	Known RBP	12.49	□□□□□ -0.41
SHANK2-219	ENST00000606715	ZBED4	O75132	1171 aa		12.48	□□□□□ -0.41
SHANK2-219	ENST00000606715	SNX16	P57768	344 aa		12.48	□□□□□ -0.41
SHANK2-219	ENST00000606715	ZYX	Q15942	572 aa	Known RBP	12.48	□□□□□ -0.41
SHANK2-219	ENST00000606715	GLT8D2	Q9H1C3	349 aa		12.48	□□□□□ -0.41
SHANK2-219	ENST00000606715	MCM3	P25205	808 aa		12.48	□□□□□ -0.41
SHANK2-219	ENST00000606715	HS2ST1	Q7LGA3	356 aa		12.48	□□□□□ -0.41
SHANK2-219	ENST00000606715	GOLGA1	Q92805	767 aa		12.48	□□□□□ -0.41
SHANK2-219	ENST00000606715	GRPEL1	Q9HAV7	217 aa		12.48	□□□□□ -0.41
SHANK2-219	ENST00000606715	BIN1	O00499	593 aa		12.48	□□□□□ -0.41
SHANK2-219	ENST00000606715	HARS	P12081	509 aa	Known RBP	12.48	□□□□□ -0.41
SHANK2-219	ENST00000606715	KIAA0753	Q2KHM9	967 aa		12.48	□□□□□ -0.41
SHANK2-219	ENST00000606715	TNNI3K	Q59H18	835 aa		12.48	□□□□□ -0.41
SHANK2-219	ENST00000606715	RRAGB	Q5VZM2	374 aa		12.48	□□□□□ -0.41
SHANK2-219	ENST00000606715	UBXN4	Q92575	508 aa		12.48	□□□□□ -0.41
SHANK2-219	ENST00000606715	LARP6	Q9BRS8	491 aa	Known RBP	12.48	□□□□□ -0.41
SHANK2-219	ENST00000606715	FPGT-TNNI3K	V9GXZ4	949 aa		12.48	□□□□□ -0.41

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