RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 MAP2K2P36507 400 aa15.26■□□□□ 0.03
CTSA-210ENST00000606000 LBX1P52954 281 aa15.26■□□□□ 0.03
CTSA-210ENST00000606000 TIMM10P62072 90 aa15.26■□□□□ 0.03
CTSA-210ENST00000606000 TTLL12Q14166 644 aaPredicted RBP15.26■□□□□ 0.03
CTSA-210ENST00000606000 SPDYE2Q495Y8 402 aa15.26■□□□□ 0.03
CTSA-210ENST00000606000 RASAL3Q86YV0 1011 aa15.26■□□□□ 0.03
CTSA-210ENST00000606000 CDAN1Q8IWY9 1227 aa15.26■□□□□ 0.03
CTSA-210ENST00000606000 ZNF70Q9UC06 446 aaPredicted RBP15.26■□□□□ 0.03
CTSA-210ENST00000606000 SERPINA10Q9UK55 444 aa15.26■□□□□ 0.03
CTSA-210ENST00000606000 A0A1B0GUL7 405 aa15.25■□□□□ 0.03
CTSA-210ENST00000606000 MYO1BO43795 1136 aa15.25■□□□□ 0.03
CTSA-210ENST00000606000 CTCFP49711 727 aaPredicted RBP15.25■□□□□ 0.03
CTSA-210ENST00000606000 CACNB3P54284 484 aa15.25■□□□□ 0.03
CTSA-210ENST00000606000 CCDC102BQ68D86 513 aa15.25■□□□□ 0.03
CTSA-210ENST00000606000 TBC1D22AQ8WUA7 517 aa15.25■□□□□ 0.03
CTSA-210ENST00000606000 PRDX5P30044 214 aa15.24■□□□□ 0.03
CTSA-210ENST00000606000 NF2P35240 595 aa15.24■□□□□ 0.03
CTSA-210ENST00000606000 FKBP1BP68106 108 aa15.24■□□□□ 0.03
CTSA-210ENST00000606000 KIF23Q02241 960 aaPredicted RBP15.24■□□□□ 0.03
CTSA-210ENST00000606000 NOGQ13253 232 aa15.24■□□□□ 0.03
CTSA-210ENST00000606000 POLA2Q14181 598 aa15.24■□□□□ 0.03
CTSA-210ENST00000606000 XAGE2Q96GT9 111 aa15.24■□□□□ 0.03
CTSA-210ENST00000606000 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.24■□□□□ 0.03
CTSA-210ENST00000606000 TCP10L2B9ZVM9 353 aa15.23■□□□□ 0.03
CTSA-210ENST00000606000 MKRN3Q13064 507 aaKnown RBP15.23■□□□□ 0.03
CTSA-210ENST00000606000 RASGRF1Q13972 1273 aa15.23■□□□□ 0.03
CTSA-210ENST00000606000 RASA3Q14644 834 aa15.23■□□□□ 0.03
CTSA-210ENST00000606000 NBPF12Q5TAG4 269 aaPredicted RBP15.23■□□□□ 0.03
CTSA-210ENST00000606000 IFFO2Q5TF58 517 aa15.23■□□□□ 0.03
CTSA-210ENST00000606000 TEKT1Q969V4 418 aa15.23■□□□□ 0.03
CTSA-210ENST00000606000 ANGEL1Q9UNK9 670 aaKnown RBP15.23■□□□□ 0.03
CTSA-210ENST00000606000 ATP8B2P98198 1209 aa15.22■□□□□ 0.03
CTSA-210ENST00000606000 DIXDC1Q155Q3 683 aa15.22■□□□□ 0.03
CTSA-210ENST00000606000 TNS4Q8IZW8 715 aa15.22■□□□□ 0.03
CTSA-210ENST00000606000 WDR66Q8TBY9 1149 aa15.22■□□□□ 0.03
CTSA-210ENST00000606000 SSH3Q8TE77 659 aa15.22■□□□□ 0.03
CTSA-210ENST00000606000 CCDC102AQ96A19 550 aa15.22■□□□□ 0.03
CTSA-210ENST00000606000 NEUROD6Q96NK8 337 aa15.22■□□□□ 0.03
CTSA-210ENST00000606000 RCAN3Q9UKA8 241 aa15.22■□□□□ 0.03
CTSA-210ENST00000606000 PPP2R3BQ9Y5P8 575 aa15.22■□□□□ 0.03
CTSA-210ENST00000606000 G3BP1Q13283 466 aaKnown RBP eCLIP15.21■□□□□ 0.03
CTSA-210ENST00000606000 APOBEC3HQ6NTF7 200 aaKnown RBP15.21■□□□□ 0.03
CTSA-210ENST00000606000 CEP85Q6P2H3 762 aa15.21■□□□□ 0.03
CTSA-210ENST00000606000 PI16Q6UXB8 463 aa15.21■□□□□ 0.03
CTSA-210ENST00000606000 ZDHHC15Q96MV8 337 aa15.21■□□□□ 0.03
CTSA-210ENST00000606000 TEPSINQ96N21 525 aa15.21■□□□□ 0.03
CTSA-210ENST00000606000 BEGAINQ9BUH8 593 aa15.21■□□□□ 0.03
CTSA-210ENST00000606000 TMEM39BQ9GZU3 492 aa15.21■□□□□ 0.03
CTSA-210ENST00000606000 PRDM10Q9NQV6 1147 aa15.21■□□□□ 0.03
CTSA-210ENST00000606000 GNL3LQ9NVN8 582 aaKnown RBP15.21■□□□□ 0.03
CTSA-210ENST00000606000 DENND2AQ9ULE3 1009 aa15.21■□□□□ 0.03
CTSA-210ENST00000606000 AKAP2Q9Y2D5 859 aa15.21■□□□□ 0.03
CTSA-210ENST00000606000 COG6Q9Y2V7 657 aa15.21■□□□□ 0.03
CTSA-210ENST00000606000 MAST3O60307 1309 aa15.2■□□□□ 0.02
CTSA-210ENST00000606000 MYH2Q9UKX2 1941 aa15.2■□□□□ 0.02
CTSA-210ENST00000606000 HDLBPQ00341 1268 aaKnown RBP15.2■□□□□ 0.02
CTSA-210ENST00000606000 C20orf194Q5TEA3 1177 aa15.2■□□□□ 0.02
CTSA-210ENST00000606000 ARMC9Q7Z3E5 817 aa15.2■□□□□ 0.02
CTSA-210ENST00000606000 CLMNQ96JQ2 1002 aa15.2■□□□□ 0.02
CTSA-210ENST00000606000 CSRNP1Q96S65 589 aa15.2■□□□□ 0.02
CTSA-210ENST00000606000 SUGT1Q9Y2Z0 365 aa15.2■□□□□ 0.02
CTSA-210ENST00000606000 DAGLAQ9Y4D2 1042 aa15.2■□□□□ 0.02
CTSA-210ENST00000606000 SALL1Q9NSC2 1324 aa15.19■□□□□ 0.02
CTSA-210ENST00000606000 AKAP11Q9UKA4 1901 aa15.19■□□□□ 0.02
CTSA-210ENST00000606000 LAMB1P07942 1786 aa15.19■□□□□ 0.02
CTSA-210ENST00000606000 SEMA3EO15041 775 aa15.19■□□□□ 0.02
CTSA-210ENST00000606000 SURF6O75683 361 aaKnown RBP15.19■□□□□ 0.02
CTSA-210ENST00000606000 OS9Q13438 667 aaPredicted RBP15.19■□□□□ 0.02
CTSA-210ENST00000606000 MVPQ14764 893 aaKnown RBP15.19■□□□□ 0.02
CTSA-210ENST00000606000 LDLRAD1Q5T700 205 aa15.19■□□□□ 0.02
CTSA-210ENST00000606000 LDHBP07195 334 aaKnown RBP15.18■□□□□ 0.02
CTSA-210ENST00000606000 TNFAIP1Q13829 316 aa15.18■□□□□ 0.02
CTSA-210ENST00000606000 TNNI3KQ59H18 835 aa15.18■□□□□ 0.02
CTSA-210ENST00000606000 HHIPL2Q6UWX4 724 aa15.18■□□□□ 0.02
CTSA-210ENST00000606000 DBNDD2Q9BQY9 259 aa15.18■□□□□ 0.02
CTSA-210ENST00000606000 ABCF2Q9UG63 623 aa15.18■□□□□ 0.02
CTSA-210ENST00000606000 FPGT-TNNI3KV9GXZ4 949 aa15.18■□□□□ 0.02
CTSA-210ENST00000606000 MAST2Q6P0Q8 1798 aa15.17■□□□□ 0.02
CTSA-210ENST00000606000 USP2O75604 605 aaPredicted RBP15.17■□□□□ 0.02
CTSA-210ENST00000606000 MAP3K11Q16584 847 aa15.17■□□□□ 0.02
CTSA-210ENST00000606000 SUPT20HL1Q3ZLR7 823 aa15.17■□□□□ 0.02
CTSA-210ENST00000606000 MRIQ9BWK5 157 aa15.17■□□□□ 0.02
CTSA-210ENST00000606000 RNF186Q9NXI6 227 aa15.17■□□□□ 0.02
CTSA-210ENST00000606000 TLR7Q9NYK1 1049 aaKnown RBP15.17■□□□□ 0.02
CTSA-210ENST00000606000 HMG20BQ9P0W2 317 aa15.17■□□□□ 0.02
CTSA-210ENST00000606000 EXOC6BQ9Y2D4 811 aa15.17■□□□□ 0.02
CTSA-210ENST00000606000 MYO5AQ9Y4I1 1855 aaKnown RBP15.16■□□□□ 0.02
CTSA-210ENST00000606000 DOCK2Q92608 1830 aa15.16■□□□□ 0.02
CTSA-210ENST00000606000 PPP1R12BO60237 982 aaPredicted RBP15.16■□□□□ 0.02
CTSA-210ENST00000606000 TRPA1O75762 1119 aa15.16■□□□□ 0.02
CTSA-210ENST00000606000 CAPN15O75808 1086 aa15.16■□□□□ 0.02
CTSA-210ENST00000606000 ARID4AP29374 1257 aaPredicted RBP15.16■□□□□ 0.02
CTSA-210ENST00000606000 MCAMP43121 646 aa15.16■□□□□ 0.02
CTSA-210ENST00000606000 TNNI2P48788 182 aa15.16■□□□□ 0.02
CTSA-210ENST00000606000 NFIAQ12857 509 aa15.16■□□□□ 0.02
CTSA-210ENST00000606000 GORABQ5T7V8 394 aa15.16■□□□□ 0.02
CTSA-210ENST00000606000 CDC42EP5Q6NZY7 148 aa15.16■□□□□ 0.02
CTSA-210ENST00000606000 TBC1D9Q6ZT07 1266 aa15.16■□□□□ 0.02
CTSA-210ENST00000606000 ZNF384Q8TF68 577 aa15.16■□□□□ 0.02
CTSA-210ENST00000606000 NOP58Q9Y2X3 529 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 921.3 ms