RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 SDR16C5Q8N3Y7 309 aa7.36□□□□□ -1.23
LSM1P2-201ENST00000604911 ABTB2Q8N961 1025 aa7.36□□□□□ -1.23
LSM1P2-201ENST00000604911 TMEM63CQ9P1W3 806 aa7.36□□□□□ -1.23
LSM1P2-201ENST00000604911 NUB1Q9Y5A7 615 aa7.36□□□□□ -1.23
LSM1P2-201ENST00000604911 COBLO75128 1261 aa7.35□□□□□ -1.23
LSM1P2-201ENST00000604911 NFIAQ12857 509 aa7.35□□□□□ -1.23
LSM1P2-201ENST00000604911 ZKSCAN8Q15776 578 aaPredicted RBP7.35□□□□□ -1.23
LSM1P2-201ENST00000604911 MYRFLQ96LU7 910 aa7.35□□□□□ -1.23
LSM1P2-201ENST00000604911 TRAIPQ9BWF2 469 aa7.35□□□□□ -1.23
LSM1P2-201ENST00000604911 C7orf69Q9H7B7 122 aa7.35□□□□□ -1.23
LSM1P2-201ENST00000604911 ELP3Q9H9T3 547 aa7.35□□□□□ -1.23
LSM1P2-201ENST00000604911 SH2B1Q9NRF2 756 aaPredicted RBP7.35□□□□□ -1.23
LSM1P2-201ENST00000604911 NFKBIEO00221 500 aa7.34□□□□□ -1.23
LSM1P2-201ENST00000604911 DDX3YO15523 660 aaKnown RBP7.34□□□□□ -1.23
LSM1P2-201ENST00000604911 PTPRAP18433 802 aa7.34□□□□□ -1.23
LSM1P2-201ENST00000604911 CDC25BP30305 580 aa7.34□□□□□ -1.23
LSM1P2-201ENST00000604911 MAP2K1Q02750 393 aaPredicted RBP7.34□□□□□ -1.23
LSM1P2-201ENST00000604911 DMTNQ08495 405 aa7.34□□□□□ -1.23
LSM1P2-201ENST00000604911 DUOXA2Q1HG44 320 aa7.34□□□□□ -1.23
LSM1P2-201ENST00000604911 GORABQ5T7V8 394 aa7.34□□□□□ -1.23
LSM1P2-201ENST00000604911 XKR5Q6UX68 686 aa7.34□□□□□ -1.23
LSM1P2-201ENST00000604911 TRIM42Q8IWZ5 723 aa7.34□□□□□ -1.23
LSM1P2-201ENST00000604911 UTP4Q969X6 686 aaKnown RBP7.34□□□□□ -1.23
LSM1P2-201ENST00000604911 KLHDC7BQ96G42 594 aa7.34□□□□□ -1.23
LSM1P2-201ENST00000604911 GOLGA2P5Q9HBQ8 144 aa7.34□□□□□ -1.23
LSM1P2-201ENST00000604911 SEC31BQ9NQW1 1179 aa7.34□□□□□ -1.23
LSM1P2-201ENST00000604911 CNTN3Q9P232 1028 aa7.34□□□□□ -1.23
LSM1P2-201ENST00000604911 SALL4Q9UJQ4 1053 aa7.34□□□□□ -1.23
LSM1P2-201ENST00000604911 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.34□□□□□ -1.23
LSM1P2-201ENST00000604911 PRR19A6NJB7 356 aa7.33□□□□□ -1.24
LSM1P2-201ENST00000604911 LETM1O95202 739 aaPredicted RBP7.33□□□□□ -1.24
LSM1P2-201ENST00000604911 RNF43Q68DV7 783 aa7.33□□□□□ -1.24
LSM1P2-201ENST00000604911 FAM117BQ6P1L5 589 aa7.33□□□□□ -1.24
LSM1P2-201ENST00000604911 NCAPG2Q86XI2 1143 aa7.33□□□□□ -1.24
LSM1P2-201ENST00000604911 UBASH3BQ8TF42 649 aa7.33□□□□□ -1.24
LSM1P2-201ENST00000604911 WNT8BQ93098 351 aa7.33□□□□□ -1.24
LSM1P2-201ENST00000604911 NUDT16Q96DE0 195 aaKnown RBP7.33□□□□□ -1.24
LSM1P2-201ENST00000604911 KRTAP9-9Q9BYP9 154 aa7.33□□□□□ -1.24
LSM1P2-201ENST00000604911 KRTAP9-4Q9BYQ2 154 aa7.33□□□□□ -1.24
LSM1P2-201ENST00000604911 GTPBP4Q9BZE4 634 aaKnown RBP7.33□□□□□ -1.24
LSM1P2-201ENST00000604911 HMX2A2RU54 273 aa7.32□□□□□ -1.24
LSM1P2-201ENST00000604911 H3BRJ5 948 aa7.32□□□□□ -1.24
LSM1P2-201ENST00000604911 ADAMTS4O75173 837 aa7.32□□□□□ -1.24
LSM1P2-201ENST00000604911 SPINK2P20155 84 aa7.32□□□□□ -1.24
LSM1P2-201ENST00000604911 PIP4K2BP78356 416 aa7.32□□□□□ -1.24
LSM1P2-201ENST00000604911 SATB1Q01826 763 aa7.32□□□□□ -1.24
LSM1P2-201ENST00000604911 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.32□□□□□ -1.24
LSM1P2-201ENST00000604911 ATCAYQ86WG3 371 aa7.32□□□□□ -1.24
LSM1P2-201ENST00000604911 FAM20CQ8IXL6 584 aa7.32□□□□□ -1.24
LSM1P2-201ENST00000604911 NME8Q8N427 588 aa7.32□□□□□ -1.24
LSM1P2-201ENST00000604911 MSL3Q8N5Y2 521 aaKnown RBP7.32□□□□□ -1.24
LSM1P2-201ENST00000604911 DBNDD2Q9BQY9 259 aa7.32□□□□□ -1.24
LSM1P2-201ENST00000604911 PNNQ9H307 717 aaKnown RBP7.32□□□□□ -1.24
LSM1P2-201ENST00000604911 KANSL3Q9P2N6 904 aa7.32□□□□□ -1.24
LSM1P2-201ENST00000604911 SEPT3Q9UH03 358 aa7.32□□□□□ -1.24
LSM1P2-201ENST00000604911 OAS3Q9Y6K5 1087 aaKnown RBP7.32□□□□□ -1.24
LSM1P2-201ENST00000604911 TPD52L2O43399 206 aaKnown RBP7.31□□□□□ -1.24
LSM1P2-201ENST00000604911 MTA1Q13330 715 aa7.31□□□□□ -1.24
LSM1P2-201ENST00000604911 ZNF438Q7Z4V0 828 aa7.31□□□□□ -1.24
LSM1P2-201ENST00000604911 CLEC10AQ8IUN9 316 aa7.31□□□□□ -1.24
LSM1P2-201ENST00000604911 AEBP1Q8IUX7 1158 aa7.31□□□□□ -1.24
LSM1P2-201ENST00000604911 FMNL2Q96PY5 1086 aa7.31□□□□□ -1.24
LSM1P2-201ENST00000604911 FAM83CQ9BQN1 747 aa7.31□□□□□ -1.24
LSM1P2-201ENST00000604911 OSGEPQ9NPF4 335 aa7.31□□□□□ -1.24
LSM1P2-201ENST00000604911 ZRANB2O95218 330 aaKnown RBP eCLIP7.3□□□□□ -1.24
LSM1P2-201ENST00000604911 BRD1O95696 1058 aa7.3□□□□□ -1.24
LSM1P2-201ENST00000604911 ACPPP15309 386 aa7.3□□□□□ -1.24
LSM1P2-201ENST00000604911 GP2P55259 537 aaKnown RBP7.3□□□□□ -1.24
LSM1P2-201ENST00000604911 INTS5Q6P9B9 1019 aaKnown RBP7.3□□□□□ -1.24
LSM1P2-201ENST00000604911 ANKRD23Q86SG2 305 aa7.3□□□□□ -1.24
LSM1P2-201ENST00000604911 DTX1Q86Y01 620 aa7.3□□□□□ -1.24
LSM1P2-201ENST00000604911 C1orf127Q8N9H9 656 aa7.3□□□□□ -1.24
LSM1P2-201ENST00000604911 MTA3Q9BTC8 594 aa7.3□□□□□ -1.24
LSM1P2-201ENST00000604911 TSPYL1Q9H0U9 437 aa7.3□□□□□ -1.24
LSM1P2-201ENST00000604911 DZANK1Q9NVP4 752 aa7.3□□□□□ -1.24
LSM1P2-201ENST00000604911 ZCCHC6Q5VYS8 1495 aaKnown RBP7.3□□□□□ -1.24
LSM1P2-201ENST00000604911 ZNF500O60304 480 aaPredicted RBP7.29□□□□□ -1.24
LSM1P2-201ENST00000604911 RPLP1P05386 114 aaKnown RBP7.29□□□□□ -1.24
LSM1P2-201ENST00000604911 ATP2B4P23634 1241 aa7.29□□□□□ -1.24
LSM1P2-201ENST00000604911 PREPP48147 710 aa7.29□□□□□ -1.24
LSM1P2-201ENST00000604911 ANKRD34AQ69YU3 496 aa7.29□□□□□ -1.24
LSM1P2-201ENST00000604911 PBXIP1Q96AQ6 731 aa7.29□□□□□ -1.24
LSM1P2-201ENST00000604911 CHRDQ9H2X0 955 aa7.29□□□□□ -1.24
LSM1P2-201ENST00000604911 SOX13Q9UN79 622 aa7.29□□□□□ -1.24
LSM1P2-201ENST00000604911 ARID3CA6NKF2 412 aa7.28□□□□□ -1.24
LSM1P2-201ENST00000604911 VGLL3A8MV65 326 aa7.28□□□□□ -1.24
LSM1P2-201ENST00000604911 PAX4O43316 350 aa7.28□□□□□ -1.24
LSM1P2-201ENST00000604911 LIG1P18858 919 aa7.28□□□□□ -1.24
LSM1P2-201ENST00000604911 IRAK1P51617 712 aa7.28□□□□□ -1.24
LSM1P2-201ENST00000604911 HELQQ8TDG4 1101 aa7.28□□□□□ -1.24
LSM1P2-201ENST00000604911 HHIPQ96QV1 700 aa7.28□□□□□ -1.24
LSM1P2-201ENST00000604911 UBA5Q9GZZ9 404 aa7.28□□□□□ -1.24
LSM1P2-201ENST00000604911 RNF208Q9H0X6 261 aa7.28□□□□□ -1.24
LSM1P2-201ENST00000604911 GGNBP2Q9H3C7 697 aa7.28□□□□□ -1.24
LSM1P2-201ENST00000604911 HIF3AQ9Y2N7 669 aa7.28□□□□□ -1.24
LSM1P2-201ENST00000604911 MEGF11A6BM72 1044 aa7.27□□□□□ -1.25
LSM1P2-201ENST00000604911 FAM177BA6PVY3 158 aa7.27□□□□□ -1.25
LSM1P2-201ENST00000604911 PDE2AO00408 941 aaPredicted RBP7.27□□□□□ -1.25
LSM1P2-201ENST00000604911 PDGFAP04085 211 aa7.27□□□□□ -1.25
LSM1P2-201ENST00000604911 BMP3P12645 472 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms