RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 CREBZFQ9NS37 354 aa24.07■■□□□ 1.44
SHKBP1-214ENST00000597396 GGA3Q9NZ52 723 aa24.07■■□□□ 1.44
SHKBP1-214ENST00000597396 PGAP2Q9UHJ9 254 aa24.07■■□□□ 1.44
SHKBP1-214ENST00000597396 WNT10BO00744 389 aa24.06■■□□□ 1.44
SHKBP1-214ENST00000597396 LDHBP07195 334 aaKnown RBP24.06■■□□□ 1.44
SHKBP1-214ENST00000597396 NBPF9Q3BBW0 867 aa24.06■■□□□ 1.44
SHKBP1-214ENST00000597396 PI16Q6UXB8 463 aa24.06■■□□□ 1.44
SHKBP1-214ENST00000597396 ZNF512BQ96KM6 892 aaPredicted RBP24.06■■□□□ 1.44
SHKBP1-214ENST00000597396 RWDD1Q9H446 243 aaPredicted RBP24.06■■□□□ 1.44
SHKBP1-214ENST00000597396 ABCF2Q9UG63 623 aa24.06■■□□□ 1.44
SHKBP1-214ENST00000597396 PRDX5P30044 214 aa24.05■■□□□ 1.44
SHKBP1-214ENST00000597396 SPTY2D1Q68D10 685 aaPredicted RBP24.05■■□□□ 1.44
SHKBP1-214ENST00000597396 MTMR14Q8NCE2 650 aa24.05■■□□□ 1.44
SHKBP1-214ENST00000597396 SNRKQ9NRH2 765 aa24.05■■□□□ 1.44
SHKBP1-214ENST00000597396 ZBTB47Q9UFB7 747 aaPredicted RBP24.05■■□□□ 1.44
SHKBP1-214ENST00000597396 SERPINA10Q9UK55 444 aa24.05■■□□□ 1.44
SHKBP1-214ENST00000597396 ASTN2O75129 1339 aaPredicted RBP24.05■■□□□ 1.44
SHKBP1-214ENST00000597396 CRKP46108 304 aa24.04■■□□□ 1.44
SHKBP1-214ENST00000597396 HDLBPQ00341 1268 aaKnown RBP24.04■■□□□ 1.44
SHKBP1-214ENST00000597396 COL13A1Q5TAT6 717 aaPredicted RBP24.04■■□□□ 1.44
SHKBP1-214ENST00000597396 ANGEL2Q5VTE6 544 aaKnown RBP24.04■■□□□ 1.44
SHKBP1-214ENST00000597396 TEKT1Q969V4 418 aa24.04■■□□□ 1.44
SHKBP1-214ENST00000597396 GCC1Q96CN9 775 aa24.04■■□□□ 1.44
SHKBP1-214ENST00000597396 MKRN1Q9UHC7 482 aaKnown RBP24.04■■□□□ 1.44
SHKBP1-214ENST00000597396 MYO1BO43795 1136 aa24.03■■□□□ 1.44
SHKBP1-214ENST00000597396 HSPA1AP0DMV8 641 aaKnown RBP24.03■■□□□ 1.44
SHKBP1-214ENST00000597396 HSPA1BP0DMV9 641 aaKnown RBP24.03■■□□□ 1.44
SHKBP1-214ENST00000597396 CDC37L1Q7L3B6 337 aa24.03■■□□□ 1.44
SHKBP1-214ENST00000597396 ZBED3Q96IU2 234 aaPredicted RBP24.03■■□□□ 1.44
SHKBP1-214ENST00000597396 GLIS2Q9BZE0 524 aaPredicted RBP24.03■■□□□ 1.44
SHKBP1-214ENST00000597396 PCDHAC2Q9Y5I4 1007 aa24.03■■□□□ 1.44
SHKBP1-214ENST00000597396 PASKQ96RG2 1323 aa24.03■■□□□ 1.44
SHKBP1-214ENST00000597396 MAST2Q6P0Q8 1798 aa24.02■■□□□ 1.44
SHKBP1-214ENST00000597396 SPDYE2BA6NHP3 402 aa24.02■■□□□ 1.44
SHKBP1-214ENST00000597396 ITGBL1O95965 494 aaPredicted RBP24.02■■□□□ 1.44
SHKBP1-214ENST00000597396 SPDYE6P0CI01 402 aa24.02■■□□□ 1.44
SHKBP1-214ENST00000597396 ERICH6Q7L0X2 663 aa24.02■■□□□ 1.44
SHKBP1-214ENST00000597396 KRT26Q7Z3Y9 468 aa24.02■■□□□ 1.44
SHKBP1-214ENST00000597396 DZIP1Q86YF9 867 aaKnown RBP24.02■■□□□ 1.44
SHKBP1-214ENST00000597396 SULF1Q8IWU6 871 aa24.02■■□□□ 1.44
SHKBP1-214ENST00000597396 TBC1D9Q6ZT07 1266 aa24.01■■□□□ 1.43
SHKBP1-214ENST00000597396 USP48Q86UV5 1035 aa24.01■■□□□ 1.43
SHKBP1-214ENST00000597396 PRMT6Q96LA8 375 aaPredicted RBP24.01■■□□□ 1.43
SHKBP1-214ENST00000597396 PITPNM2Q9BZ72 1349 aa24.01■■□□□ 1.43
SHKBP1-214ENST00000597396 ZAP70P43403 619 aa24■■□□□ 1.43
SHKBP1-214ENST00000597396 ANKRD45Q5TZF3 282 aa24■■□□□ 1.43
SHKBP1-214ENST00000597396 MRIQ9BWK5 157 aa24■■□□□ 1.43
SHKBP1-214ENST00000597396 LRP2BPQ9P2M1 347 aa24■■□□□ 1.43
SHKBP1-214ENST00000597396 DOCK2Q92608 1830 aa24■■□□□ 1.43
SHKBP1-214ENST00000597396 HHIPL2Q6UWX4 724 aa23.99■■□□□ 1.43
SHKBP1-214ENST00000597396 RAI14Q9P0K7 980 aa23.99■■□□□ 1.43
SHKBP1-214ENST00000597396 CLRN2A0PK11 232 aa23.98■■□□□ 1.43
SHKBP1-214ENST00000597396 ADM5C9JUS6 153 aa23.98■■□□□ 1.43
SHKBP1-214ENST00000597396 TRAF5O00463 557 aa23.98■■□□□ 1.43
SHKBP1-214ENST00000597396 IGHDP01880 384 aa23.98■■□□□ 1.43
SHKBP1-214ENST00000597396 DIXDC1Q155Q3 683 aa23.98■■□□□ 1.43
SHKBP1-214ENST00000597396 APOBEC3FQ8IUX4 373 aaKnown RBP23.98■■□□□ 1.43
SHKBP1-214ENST00000597396 SLF2Q8IX21 1173 aa23.98■■□□□ 1.43
SHKBP1-214ENST00000597396 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.98■■□□□ 1.43
SHKBP1-214ENST00000597396 GPATCH3Q96I76 525 aa23.98■■□□□ 1.43
SHKBP1-214ENST00000597396 ZDHHC15Q96MV8 337 aa23.98■■□□□ 1.43
SHKBP1-214ENST00000597396 PCNTO95613 3336 aa23.97■■□□□ 1.43
SHKBP1-214ENST00000597396 TMEM88BA6NKF7 163 aa23.97■■□□□ 1.43
SHKBP1-214ENST00000597396 CYP2E1P05181 493 aaPredicted RBP23.97■■□□□ 1.43
SHKBP1-214ENST00000597396 TDRD3Q9H7E2 651 aaKnown RBP23.97■■□□□ 1.43
SHKBP1-214ENST00000597396 VEZTQ9HBM0 779 aa23.97■■□□□ 1.43
SHKBP1-214ENST00000597396 MYH7P12883 1935 aa23.96■■□□□ 1.43
SHKBP1-214ENST00000597396 CNTNAP1P78357 1384 aa23.96■■□□□ 1.43
SHKBP1-214ENST00000597396 MECOMQ03112 1051 aa23.96■■□□□ 1.43
SHKBP1-214ENST00000597396 FMR1Q06787 632 aaKnown RBP eCLIP23.96■■□□□ 1.43
SHKBP1-214ENST00000597396 SMC5Q8IY18 1101 aa23.96■■□□□ 1.43
SHKBP1-214ENST00000597396 DNAJC2Q99543 621 aaKnown RBP23.96■■□□□ 1.43
SHKBP1-214ENST00000597396 SCAF8Q9UPN6 1271 aaKnown RBP23.96■■□□□ 1.43
SHKBP1-214ENST00000597396 DAGLAQ9Y4D2 1042 aa23.96■■□□□ 1.43
SHKBP1-214ENST00000597396 NDUFB9Q9Y6M9 179 aa23.96■■□□□ 1.43
SHKBP1-214ENST00000597396 AOX1Q06278 1338 aa23.95■■□□□ 1.42
SHKBP1-214ENST00000597396 AK9Q5TCS8 1911 aa23.95■■□□□ 1.42
SHKBP1-214ENST00000597396 NEFLP07196 543 aa23.95■■□□□ 1.42
SHKBP1-214ENST00000597396 ATP5JP18859 108 aa23.95■■□□□ 1.42
SHKBP1-214ENST00000597396 GSTO1P78417 241 aa23.95■■□□□ 1.42
SHKBP1-214ENST00000597396 SPDYE2Q495Y8 402 aa23.95■■□□□ 1.42
SHKBP1-214ENST00000597396 TNS4Q8IZW8 715 aa23.95■■□□□ 1.42
SHKBP1-214ENST00000597396 BOLA2Q9H3K6 86 aa23.95■■□□□ 1.42
SHKBP1-214ENST00000597396 ECHDC1Q9NTX5 307 aa23.95■■□□□ 1.42
SHKBP1-214ENST00000597396 TMOD2Q9NZR1 351 aa23.95■■□□□ 1.42
SHKBP1-214ENST00000597396 ZNF70Q9UC06 446 aaPredicted RBP23.95■■□□□ 1.42
SHKBP1-214ENST00000597396 LDHCP07864 332 aa23.94■■□□□ 1.42
SHKBP1-214ENST00000597396 B4GALNT3Q6L9W6 998 aa23.94■■□□□ 1.42
SHKBP1-214ENST00000597396 ZNF408Q9H9D4 720 aa23.94■■□□□ 1.42
SHKBP1-214ENST00000597396 PIH1D3Q9NQM4 214 aaKnown RBP23.94■■□□□ 1.42
SHKBP1-214ENST00000597396 TTF1Q15361 905 aaPredicted RBP23.93■■□□□ 1.42
SHKBP1-214ENST00000597396 APOBEC3HQ6NTF7 200 aaKnown RBP23.93■■□□□ 1.42
SHKBP1-214ENST00000597396 DLK2Q6UY11 383 aa23.93■■□□□ 1.42
SHKBP1-214ENST00000597396 NSUN4Q96CB9 384 aaKnown RBP23.93■■□□□ 1.42
SHKBP1-214ENST00000597396 MROH7-TTC4A0A0A0MT08 1334 aa23.92■■□□□ 1.42
SHKBP1-214ENST00000597396 GAKO14976 1311 aa23.92■■□□□ 1.42
SHKBP1-214ENST00000597396 IDH1O75874 414 aaKnown RBP23.92■■□□□ 1.42
SHKBP1-214ENST00000597396 CELF2O95319 508 aaKnown RBP23.92■■□□□ 1.42
SHKBP1-214ENST00000597396 TNFAIP1Q13829 316 aa23.92■■□□□ 1.42
SHKBP1-214ENST00000597396 NAA16Q6N069 864 aaPredicted RBP23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms