RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 SEMA3EO15041 775 aa13.05□□□□□ -0.32
CCDC9-203ENST00000596938 ZBTB7BO15156 539 aaPredicted RBP13.05□□□□□ -0.32
CCDC9-203ENST00000596938 TNFAIP1Q13829 316 aa13.05□□□□□ -0.32
CCDC9-203ENST00000596938 TTLL12Q14166 644 aaPredicted RBP13.05□□□□□ -0.32
CCDC9-203ENST00000596938 RASA3Q14644 834 aa13.05□□□□□ -0.32
CCDC9-203ENST00000596938 MAP3K11Q16584 847 aa13.05□□□□□ -0.32
CCDC9-203ENST00000596938 SPDYE2Q495Y8 402 aa13.05□□□□□ -0.32
CCDC9-203ENST00000596938 RASAL3Q86YV0 1011 aa13.05□□□□□ -0.32
CCDC9-203ENST00000596938 FTSJ3Q8IY81 847 aaKnown RBP13.05□□□□□ -0.32
CCDC9-203ENST00000596938 TEKT1Q969V4 418 aa13.05□□□□□ -0.32
CCDC9-203ENST00000596938 ZDHHC15Q96MV8 337 aa13.05□□□□□ -0.32
CCDC9-203ENST00000596938 CSRNP1Q96S65 589 aa13.05□□□□□ -0.32
CCDC9-203ENST00000596938 TDRD3Q9H7E2 651 aaKnown RBP13.05□□□□□ -0.32
CCDC9-203ENST00000596938 AKAP2Q9Y2D5 859 aa13.05□□□□□ -0.32
CCDC9-203ENST00000596938 AOX1Q06278 1338 aa13.05□□□□□ -0.32
CCDC9-203ENST00000596938 A0A1B0GUL6 1792 aa13.04□□□□□ -0.32
CCDC9-203ENST00000596938 THSD7BQ9C0I4 1608 aa13.04□□□□□ -0.32
CCDC9-203ENST00000596938 PNMA6EA0A0J9YXQ4 647 aa13.04□□□□□ -0.32
CCDC9-203ENST00000596938 PPP1R12BO60237 982 aaPredicted RBP13.04□□□□□ -0.32
CCDC9-203ENST00000596938 TIMM10P62072 90 aa13.04□□□□□ -0.32
CCDC9-203ENST00000596938 ATP8B2P98198 1209 aa13.04□□□□□ -0.32
CCDC9-203ENST00000596938 HHIPL2Q6UWX4 724 aa13.04□□□□□ -0.32
CCDC9-203ENST00000596938 VEZTQ9HBM0 779 aa13.04□□□□□ -0.32
CCDC9-203ENST00000596938 DENND2AQ9ULE3 1009 aa13.04□□□□□ -0.32
CCDC9-203ENST00000596938 MAST3O60307 1309 aa13.04□□□□□ -0.32
CCDC9-203ENST00000596938 RLBP1P12271 317 aa13.03□□□□□ -0.32
CCDC9-203ENST00000596938 PHKA1P46020 1223 aa13.03□□□□□ -0.32
CCDC9-203ENST00000596938 TFCP2Q12800 502 aa13.03□□□□□ -0.32
CCDC9-203ENST00000596938 G3BP1Q13283 466 aaKnown RBP eCLIP13.03□□□□□ -0.32
CCDC9-203ENST00000596938 POLA2Q14181 598 aa13.03□□□□□ -0.32
CCDC9-203ENST00000596938 NBPF12Q5TAG4 269 aaPredicted RBP13.03□□□□□ -0.32
CCDC9-203ENST00000596938 CCDC102BQ68D86 513 aa13.03□□□□□ -0.32
CCDC9-203ENST00000596938 APOBEC3HQ6NTF7 200 aaKnown RBP13.03□□□□□ -0.32
CCDC9-203ENST00000596938 SAGE1Q9NXZ1 904 aa13.03□□□□□ -0.32
CCDC9-203ENST00000596938 SALL1Q9NSC2 1324 aa13.03□□□□□ -0.32
CCDC9-203ENST00000596938 POLR2AP24928 1970 aaKnown RBP13.03□□□□□ -0.32
CCDC9-203ENST00000596938 A0A1B0GUL7 405 aa13.02□□□□□ -0.33
CCDC9-203ENST00000596938 MS4A1P11836 297 aa13.02□□□□□ -0.33
CCDC9-203ENST00000596938 ADORA1P30542 326 aa13.02□□□□□ -0.33
CCDC9-203ENST00000596938 TNNI2P48788 182 aa13.02□□□□□ -0.33
CCDC9-203ENST00000596938 PRKG1Q13976 671 aa13.02□□□□□ -0.33
CCDC9-203ENST00000596938 FKBP1CQ5VVH2 108 aa13.02□□□□□ -0.33
CCDC9-203ENST00000596938 ITPRIPQ8IWB1 547 aa13.02□□□□□ -0.33
CCDC9-203ENST00000596938 SSH3Q8TE77 659 aa13.02□□□□□ -0.33
CCDC9-203ENST00000596938 XAGE2Q96GT9 111 aa13.02□□□□□ -0.33
CCDC9-203ENST00000596938 ANGEL1Q9UNK9 670 aaKnown RBP13.02□□□□□ -0.33
CCDC9-203ENST00000596938 PAPPA2Q9BXP8 1791 aa13.02□□□□□ -0.33
CCDC9-203ENST00000596938 USP2O75604 605 aaPredicted RBP13.01□□□□□ -0.33
CCDC9-203ENST00000596938 LDHBP07195 334 aaKnown RBP13.01□□□□□ -0.33
CCDC9-203ENST00000596938 TM4SF4P48230 202 aa13.01□□□□□ -0.33
CCDC9-203ENST00000596938 MVPQ14764 893 aaKnown RBP13.01□□□□□ -0.33
CCDC9-203ENST00000596938 FAM83AQ86UY5 434 aa13.01□□□□□ -0.33
CCDC9-203ENST00000596938 SLC10A4Q96EP9 437 aa13.01□□□□□ -0.33
CCDC9-203ENST00000596938 TEPSINQ96N21 525 aa13.01□□□□□ -0.33
CCDC9-203ENST00000596938 RNF186Q9NXI6 227 aa13.01□□□□□ -0.33
CCDC9-203ENST00000596938 TSKSQ9UJT2 592 aa13.01□□□□□ -0.33
CCDC9-203ENST00000596938 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.01□□□□□ -0.33
CCDC9-203ENST00000596938 PDS5AQ29RF7 1337 aaKnown RBP13.01□□□□□ -0.33
CCDC9-203ENST00000596938 TCP10L2B9ZVM9 353 aa13□□□□□ -0.33
CCDC9-203ENST00000596938 SPRYD7Q5W111 196 aa13□□□□□ -0.33
CCDC9-203ENST00000596938 ZGPATQ8N5A5 531 aaKnown RBP13□□□□□ -0.33
CCDC9-203ENST00000596938 NEUROD6Q96NK8 337 aa13□□□□□ -0.33
CCDC9-203ENST00000596938 GPR108Q9NPR9 543 aa13□□□□□ -0.33
CCDC9-203ENST00000596938 TRPA1O75762 1119 aa12.99□□□□□ -0.33
CCDC9-203ENST00000596938 PRDX5P30044 214 aa12.99□□□□□ -0.33
CCDC9-203ENST00000596938 IREB2P48200 963 aaKnown RBP12.99□□□□□ -0.33
CCDC9-203ENST00000596938 INHBEP58166 350 aa12.99□□□□□ -0.33
CCDC9-203ENST00000596938 RASGRF1Q13972 1273 aa12.99□□□□□ -0.33
CCDC9-203ENST00000596938 PANK1Q8TE04 598 aa12.99□□□□□ -0.33
CCDC9-203ENST00000596938 TMEM39BQ9GZU3 492 aa12.99□□□□□ -0.33
CCDC9-203ENST00000596938 TMOD2Q9NZR1 351 aa12.99□□□□□ -0.33
CCDC9-203ENST00000596938 FZD1Q9UP38 647 aa12.99□□□□□ -0.33
CCDC9-203ENST00000596938 NOP58Q9Y2X3 529 aaKnown RBP12.99□□□□□ -0.33
CCDC9-203ENST00000596938 SURF6O75683 361 aaKnown RBP12.98□□□□□ -0.33
CCDC9-203ENST00000596938 GORABQ5T7V8 394 aa12.98□□□□□ -0.33
CCDC9-203ENST00000596938 SPTY2D1Q68D10 685 aaPredicted RBP12.98□□□□□ -0.33
CCDC9-203ENST00000596938 ANKRD13AQ8IZ07 590 aa12.98□□□□□ -0.33
CCDC9-203ENST00000596938 HOOK2Q96ED9 719 aa12.98□□□□□ -0.33
CCDC9-203ENST00000596938 FAM163AQ96GL9 167 aaPredicted RBP12.98□□□□□ -0.33
CCDC9-203ENST00000596938 RCAN3Q9UKA8 241 aa12.98□□□□□ -0.33
CCDC9-203ENST00000596938 DAGLAQ9Y4D2 1042 aa12.98□□□□□ -0.33
CCDC9-203ENST00000596938 SSC5DA1L4H1 1573 aa12.98□□□□□ -0.33
CCDC9-203ENST00000596938 ZBTB48P10074 688 aaPredicted RBP12.97□□□□□ -0.33
CCDC9-203ENST00000596938 CACNB3P54284 484 aa12.97□□□□□ -0.33
CCDC9-203ENST00000596938 SREBF2Q12772 1141 aa12.97□□□□□ -0.33
CCDC9-203ENST00000596938 DIXDC1Q155Q3 683 aa12.97□□□□□ -0.33
CCDC9-203ENST00000596938 CDC42EP5Q6NZY7 148 aa12.97□□□□□ -0.33
CCDC9-203ENST00000596938 SLF2Q8IX21 1173 aa12.97□□□□□ -0.33
CCDC9-203ENST00000596938 FAM151AQ8WW52 585 aa12.97□□□□□ -0.33
CCDC9-203ENST00000596938 CLMNQ96JQ2 1002 aa12.97□□□□□ -0.33
CCDC9-203ENST00000596938 C1orf115Q9H7X2 142 aa12.97□□□□□ -0.33
CCDC9-203ENST00000596938 MANSC4A6NHS7 340 aaPredicted RBP12.96□□□□□ -0.33
CCDC9-203ENST00000596938 UQCRFS1P1P0C7P4 283 aa12.96□□□□□ -0.33
CCDC9-203ENST00000596938 ARID4AP29374 1257 aaPredicted RBP12.96□□□□□ -0.33
CCDC9-203ENST00000596938 MAP3K9P80192 1104 aa12.96□□□□□ -0.33
CCDC9-203ENST00000596938 TNNI3KQ59H18 835 aa12.96□□□□□ -0.33
CCDC9-203ENST00000596938 CEP85Q6P2H3 762 aa12.96□□□□□ -0.33
CCDC9-203ENST00000596938 CDAN1Q8IWY9 1227 aa12.96□□□□□ -0.33
CCDC9-203ENST00000596938 SPATA5Q8NB90 893 aa12.96□□□□□ -0.33
CCDC9-203ENST00000596938 WNK4Q96J92 1243 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms