RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 MAGEB6Q8N7X4 407 aa26.58■■□□□ 1.85
SRRM1-222ENST00000596378 AIDAQ96BJ3 306 aa26.58■■□□□ 1.85
SRRM1-222ENST00000596378 THRAP3Q9Y2W1 955 aaKnown RBP26.58■■□□□ 1.85
SRRM1-222ENST00000596378 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.57■■□□□ 1.84
SRRM1-222ENST00000596378 NTSR2O95665 410 aa26.57■■□□□ 1.84
SRRM1-222ENST00000596378 COL4A1P02462 1669 aa26.57■■□□□ 1.84
SRRM1-222ENST00000596378 TRDNQ13061 729 aa26.57■■□□□ 1.84
SRRM1-222ENST00000596378 CCAR1Q8IX12 1150 aaKnown RBP26.57■■□□□ 1.84
SRRM1-222ENST00000596378 STRBPQ96SI9 672 aaKnown RBP26.57■■□□□ 1.84
SRRM1-222ENST00000596378 TTC12Q9H892 705 aaPredicted RBP26.57■■□□□ 1.84
SRRM1-222ENST00000596378 SENP2Q9HC62 589 aa26.57■■□□□ 1.84
SRRM1-222ENST00000596378 ORC3Q9UBD5 711 aaPredicted RBP26.57■■□□□ 1.84
SRRM1-222ENST00000596378 RXRAP19793 462 aa26.56■■□□□ 1.84
SRRM1-222ENST00000596378 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.56■■□□□ 1.84
SRRM1-222ENST00000596378 NEDD4P46934 1319 aa26.56■■□□□ 1.84
SRRM1-222ENST00000596378 SPATA31A5Q5VU36 1347 aa26.56■■□□□ 1.84
SRRM1-222ENST00000596378 SPATA31A7Q8IWB4 1347 aa26.56■■□□□ 1.84
SRRM1-222ENST00000596378 B4E1Z4 1266 aa26.56■■□□□ 1.84
SRRM1-222ENST00000596378 BCAMP50895 628 aa26.56■■□□□ 1.84
SRRM1-222ENST00000596378 C8orf76Q96K31 380 aa26.56■■□□□ 1.84
SRRM1-222ENST00000596378 ZNF396Q96N95 335 aaPredicted RBP26.56■■□□□ 1.84
SRRM1-222ENST00000596378 CPLX1O14810 134 aa26.55■■□□□ 1.84
SRRM1-222ENST00000596378 CBX8Q9HC52 389 aa26.55■■□□□ 1.84
SRRM1-222ENST00000596378 EPB41L4AQ9HCS5 686 aaPredicted RBP26.55■■□□□ 1.84
SRRM1-222ENST00000596378 C4AP0C0L4 1744 aa26.55■■□□□ 1.84
SRRM1-222ENST00000596378 C4BP0C0L5 1744 aa26.55■■□□□ 1.84
SRRM1-222ENST00000596378 MBD4O95243 580 aa26.55■■□□□ 1.84
SRRM1-222ENST00000596378 CCDC152Q4G0S7 254 aa26.55■■□□□ 1.84
SRRM1-222ENST00000596378 TAOK2Q9UL54 1235 aa26.55■■□□□ 1.84
SRRM1-222ENST00000596378 RREB1Q92766 1687 aa26.54■■□□□ 1.84
SRRM1-222ENST00000596378 POLR3DP05423 398 aaPredicted RBP26.54■■□□□ 1.84
SRRM1-222ENST00000596378 PARP10Q53GL7 1025 aa26.54■■□□□ 1.84
SRRM1-222ENST00000596378 CHMP4CQ96CF2 233 aa26.54■■□□□ 1.84
SRRM1-222ENST00000596378 ARMT1Q9H993 441 aa26.54■■□□□ 1.84
SRRM1-222ENST00000596378 DHX16O60231 1041 aaKnown RBP26.54■■□□□ 1.84
SRRM1-222ENST00000596378 KCNQ4P56696 695 aa26.54■■□□□ 1.84
SRRM1-222ENST00000596378 ANGEL1Q9UNK9 670 aaKnown RBP26.54■■□□□ 1.84
SRRM1-222ENST00000596378 DOCK2Q92608 1830 aa26.53■■□□□ 1.84
SRRM1-222ENST00000596378 WDR19Q8NEZ3 1342 aa26.53■■□□□ 1.84
SRRM1-222ENST00000596378 ME1P48163 572 aa26.53■■□□□ 1.84
SRRM1-222ENST00000596378 SASS6Q6UVJ0 657 aa26.53■■□□□ 1.84
SRRM1-222ENST00000596378 DNAJC25Q9H1X3 360 aa26.53■■□□□ 1.84
SRRM1-222ENST00000596378 IGHMBP2P38935 993 aaKnown RBP26.53■■□□□ 1.84
SRRM1-222ENST00000596378 SPC24Q8NBT2 197 aa26.53■■□□□ 1.84
SRRM1-222ENST00000596378 SH2B2O14492 632 aaPredicted RBP26.52■■□□□ 1.84
SRRM1-222ENST00000596378 CTDSPL2Q05D32 466 aa26.52■■□□□ 1.84
SRRM1-222ENST00000596378 MAP3K12Q12852 859 aa26.52■■□□□ 1.84
SRRM1-222ENST00000596378 FBXO18Q8NFZ0 1043 aa26.52■■□□□ 1.84
SRRM1-222ENST00000596378 AIFM3Q96NN9 605 aa26.52■■□□□ 1.84
SRRM1-222ENST00000596378 SNW1Q13573 536 aaKnown RBP26.51■■□□□ 1.84
SRRM1-222ENST00000596378 CCDC144CPQ8IYA2 1237 aa26.51■■□□□ 1.84
SRRM1-222ENST00000596378 IQSEC3Q9UPP2 1182 aaPredicted RBP26.51■■□□□ 1.84
SRRM1-222ENST00000596378 R3HCC1Q9Y3T6 440 aaKnown RBP26.51■■□□□ 1.84
SRRM1-222ENST00000596378 PRKAB2O43741 272 aa26.51■■□□□ 1.83
SRRM1-222ENST00000596378 CHRNDQ07001 517 aa26.51■■□□□ 1.83
SRRM1-222ENST00000596378 KIAA2012Q0VF49 1180 aa26.51■■□□□ 1.83
SRRM1-222ENST00000596378 SMIM5Q71RC9 77 aa26.51■■□□□ 1.83
SRRM1-222ENST00000596378 IFNL3Q8IZI9 196 aa26.51■■□□□ 1.83
SRRM1-222ENST00000596378 CLIC4Q9Y696 253 aa26.51■■□□□ 1.83
SRRM1-222ENST00000596378 TACC3Q9Y6A5 838 aa26.51■■□□□ 1.83
SRRM1-222ENST00000596378 KIF28PB7ZC32 967 aa26.5■■□□□ 1.83
SRRM1-222ENST00000596378 C17orf53Q8N3J3 647 aaPredicted RBP26.5■■□□□ 1.83
SRRM1-222ENST00000596378 WTIPA6NIX2 430 aaPredicted RBP26.5■■□□□ 1.83
SRRM1-222ENST00000596378 ATL3Q6DD88 541 aa26.5■■□□□ 1.83
SRRM1-222ENST00000596378 PCDHA7Q9UN72 937 aa26.5■■□□□ 1.83
SRRM1-222ENST00000596378 A0A087WWV3 80 aa26.49■■□□□ 1.83
SRRM1-222ENST00000596378 PATL2C9JE40 543 aaKnown RBP26.49■■□□□ 1.83
SRRM1-222ENST00000596378 METAP2P50579 478 aaKnown RBP eCLIP26.49■■□□□ 1.83
SRRM1-222ENST00000596378 CCDC73Q6ZRK6 1079 aa26.49■■□□□ 1.83
SRRM1-222ENST00000596378 C3orf67Q6ZVT6 689 aa26.49■■□□□ 1.83
SRRM1-222ENST00000596378 MICU3Q86XE3 530 aa26.49■■□□□ 1.83
SRRM1-222ENST00000596378 FSIP1Q8NA03 581 aa26.49■■□□□ 1.83
SRRM1-222ENST00000596378 MYL10Q9BUA6 226 aa26.49■■□□□ 1.83
SRRM1-222ENST00000596378 NAPBQ9H115 298 aa26.49■■□□□ 1.83
SRRM1-222ENST00000596378 TAF1P21675 1872 aa26.49■■□□□ 1.83
SRRM1-222ENST00000596378 ZMYM6O95789 1325 aa26.49■■□□□ 1.83
SRRM1-222ENST00000596378 CDC27P30260 824 aa26.49■■□□□ 1.83
SRRM1-222ENST00000596378 LCORLQ8N3X6 602 aa26.49■■□□□ 1.83
SRRM1-222ENST00000596378 LAMB2P55268 1798 aa26.48■■□□□ 1.83
SRRM1-222ENST00000596378 APOA5Q6Q788 366 aa26.48■■□□□ 1.83
SRRM1-222ENST00000596378 RTEL1Q9NZ71 1219 aa26.48■■□□□ 1.83
SRRM1-222ENST00000596378 ZNF165P49910 485 aa26.48■■□□□ 1.83
SRRM1-222ENST00000596378 PIP4K2BP78356 416 aa26.48■■□□□ 1.83
SRRM1-222ENST00000596378 STK11IPQ8N1F8 1099 aa26.48■■□□□ 1.83
SRRM1-222ENST00000596378 MIGA1Q8NAN2 632 aa26.48■■□□□ 1.83
SRRM1-222ENST00000596378 ENGASEQ8NFI3 743 aa26.48■■□□□ 1.83
SRRM1-222ENST00000596378 PHKBQ93100 1093 aa26.48■■□□□ 1.83
SRRM1-222ENST00000596378 CHD4Q14839 1912 aa26.47■■□□□ 1.83
SRRM1-222ENST00000596378 GSG1L2A8MUP6 293 aa26.47■■□□□ 1.83
SRRM1-222ENST00000596378 IGDCC4Q8TDY8 1250 aa26.47■■□□□ 1.83
SRRM1-222ENST00000596378 ERCC4Q92889 916 aaPredicted RBP26.47■■□□□ 1.83
SRRM1-222ENST00000596378 ALX1Q15699 326 aa26.47■■□□□ 1.83
SRRM1-222ENST00000596378 ERFEQ4G0M1 354 aa26.47■■□□□ 1.83
SRRM1-222ENST00000596378 LINC00116Q8NCU8 138 aa26.47■■□□□ 1.83
SRRM1-222ENST00000596378 LY9Q9HBG7 655 aa26.47■■□□□ 1.83
SRRM1-222ENST00000596378 LTBP4Q8N2S1 1624 aa26.46■■□□□ 1.83
SRRM1-222ENST00000596378 COL5A3P25940 1745 aaPredicted RBP26.46■■□□□ 1.83
SRRM1-222ENST00000596378 FAM160A1Q05DH4 1040 aa26.46■■□□□ 1.83
SRRM1-222ENST00000596378 FAM98CQ17RN3 349 aaKnown RBP26.46■■□□□ 1.83
SRRM1-222ENST00000596378 NFXL1Q6ZNB6 911 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms