RNA–Protein interactions for RNA: ENST00000595384.1

SIPA1L3-204, Transcript of signal induced proliferation associated 1 like 3, human

TSL 5

Gene SIPA1L3, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIPA1L3-204	ENST00000595384	GTF2I	P78347	998 aa		13.84	□□□□□ -0.19
SIPA1L3-204	ENST00000595384	CFAP100	Q494V2	611 aa		13.84	□□□□□ -0.19
SIPA1L3-204	ENST00000595384	USP38	Q8NB14	1042 aa		13.84	□□□□□ -0.19
SIPA1L3-204	ENST00000595384	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
SIPA1L3-204	ENST00000595384	NBPF3	Q9H094	633 aa		13.84	□□□□□ -0.19
SIPA1L3-204	ENST00000595384	MUC6	Q6W4X9	2439 aa		13.84	□□□□□ -0.19
SIPA1L3-204	ENST00000595384	SPDYE2B	A6NHP3	402 aa		13.83	□□□□□ -0.2
SIPA1L3-204	ENST00000595384		F8W031	263 aa	Predicted RBP	13.83	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	IRF6	O14896	467 aa		13.83	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	SPDYE6	P0CI01	402 aa		13.83	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	FLT3LG	P49771	235 aa		13.83	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	SNAPC2	Q13487	334 aa		13.83	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	ANKLE1	Q8NAG6	615 aa		13.83	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	TTYH1	Q9H313	450 aa	Predicted RBP	13.83	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	C11orf49	Q9H6J7	331 aa		13.83	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	ARAP2	Q8WZ64	1704 aa		13.83	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	CNGB1	Q14028	1251 aa	Predicted RBP	13.82	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	ANKRD18A	Q8IVF6	992 aa		13.82	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	CERS5	Q8N5B7	392 aa		13.82	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	SNCAIP	Q9Y6H5	919 aa		13.82	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	PDHX	O00330	501 aa		13.81	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.81	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	KLRK1	P26718	216 aa		13.81	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	ALYREF	Q86V81	257 aa	Known RBP	13.81	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	TEPSIN	Q96N21	525 aa		13.81	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	TAOK2	Q9UL54	1235 aa		13.81	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	CCT4	P50991	539 aa	Known RBP	13.8	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	CCDC152	Q4G0S7	254 aa		13.8	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	ERO1B	Q86YB8	467 aa		13.8	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	ADAMTS19	Q8TE59	1207 aa		13.8	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	PXYLP1	Q8TE99	480 aa		13.8	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	HCN4	Q9Y3Q4	1203 aa		13.8	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.8	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	BCR	P11274	1271 aa		13.79	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	PPIL2	Q13356	520 aa		13.79	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	ANKRD23	Q86SG2	305 aa		13.79	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	PLBD2	Q8NHP8	589 aa		13.79	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	PFAS	O15067	1338 aa		13.79	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	RBM5	P52756	815 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.78	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.78	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	UHRF1	Q96T88	793 aa	Predicted RBP	13.78	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	TMEM39B	Q9GZU3	492 aa		13.78	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	MINPP1	Q9UNW1	487 aa		13.78	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	TCF20	Q9UGU0	1960 aa	Known RBP	13.78	□□□□□ -0.2
SIPA1L3-204	ENST00000595384	HSPA5	P11021	654 aa	Known RBP	13.77	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	IRF5	Q13568	498 aa		13.77	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	TNFAIP1	Q13829	316 aa		13.77	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	JARID2	Q92833	1246 aa	Predicted RBP	13.77	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	C1QTNF1	Q9BXJ1	281 aa		13.77	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	ZNF70	Q9UC06	446 aa	Predicted RBP	13.77	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	CYP2C8	P10632	490 aa		13.76	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	LRRC26	Q2I0M4	334 aa		13.76	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	SPDYE2	Q495Y8	402 aa		13.76	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.76	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	WRNIP1	Q96S55	665 aa		13.76	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	LBHD1	Q9BQE6	289 aa	Predicted RBP	13.76	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	TSPYL4	Q9UJ04	414 aa		13.76	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	LTBP2	Q14767	1821 aa		13.76	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	TCP10L2	B9ZVM9	353 aa		13.75	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	TNPO2	O14787	897 aa	Known RBP	13.75	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	NUDC	Q9Y266	331 aa		13.75	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	PDE8A	O60658	829 aa		13.74	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	SHH	Q15465	462 aa		13.74	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	CFAP53	Q96M91	514 aa		13.74	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	ASB2	Q96Q27	587 aa		13.74	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	PARK7	Q99497	189 aa	Known RBP	13.74	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	LRFN3	Q9BTN0	628 aa		13.74	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	TDRD3	Q9H7E2	651 aa	Known RBP	13.74	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	CD209	Q9NNX6	404 aa		13.74	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	CHPF2	Q9P2E5	772 aa		13.74	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	JAG2	Q9Y219	1238 aa		13.74	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	MYH3	P11055	1940 aa		13.74	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	AK9	Q5TCS8	1911 aa		13.74	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	MYO9B	Q13459	2157 aa		13.73	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	MAST2	Q6P0Q8	1798 aa		13.73	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	PER1	O15534	1290 aa	Predicted RBP	13.73	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	TRIM32	Q13049	653 aa		13.73	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	TRIM28	Q13263	835 aa	Known RBP	13.73	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	MOGS	Q13724	837 aa		13.73	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	C9orf50	Q5SZB4	431 aa		13.73	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.73	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	NECAB3	Q96P71	396 aa	Predicted RBP	13.73	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	CDC5L	Q99459	802 aa	Known RBP	13.73	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	BSDC1	Q9NW68	430 aa	Predicted RBP	13.73	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	OGDHL	Q9ULD0	1010 aa		13.73	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	LEMD3	Q9Y2U8	911 aa		13.73	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	COL6A1	P12109	1028 aa		13.72	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	HSP90B1	P14625	803 aa	Known RBP	13.72	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	PPAT	Q06203	517 aa		13.72	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	PPM1E	Q8WY54	764 aa		13.72	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	HMGCR	P04035	888 aa		13.71	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	SMAD3	P84022	425 aa	Known RBP	13.71	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	GRIN2C	Q14957	1233 aa		13.71	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	HMX1	Q9NP08	348 aa	Predicted RBP	13.71	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	THEG	Q9P2T0	379 aa		13.71	□□□□□ -0.21
SIPA1L3-204	ENST00000595384	GPAT2	Q6NUI2	795 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms