RNA–Protein interactions for RNA: ENST00000591650.1

AP3D1-211, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 1 (best)

Gene AP3D1, Length 1,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-211ENST00000591650 ZNF384Q8TF68 577 aa21■□□□□ 0.95
AP3D1-211ENST00000591650 RAI14Q9P0K7 980 aa21■□□□□ 0.95
AP3D1-211ENST00000591650 TTF2Q9UNY4 1162 aaKnown RBP21■□□□□ 0.95
AP3D1-211ENST00000591650 TTF1Q15361 905 aaPredicted RBP20.99■□□□□ 0.95
AP3D1-211ENST00000591650 ERICH6Q7L0X2 663 aa20.99■□□□□ 0.95
AP3D1-211ENST00000591650 MICALL2Q8IY33 904 aa20.99■□□□□ 0.95
AP3D1-211ENST00000591650 RRAGCQ9HB90 399 aa20.99■□□□□ 0.95
AP3D1-211ENST00000591650 GPRC5DQ9NZD1 345 aa20.99■□□□□ 0.95
AP3D1-211ENST00000591650 LRP2BPQ9P2M1 347 aa20.99■□□□□ 0.95
AP3D1-211ENST00000591650 SUGT1Q9Y2Z0 365 aa20.99■□□□□ 0.95
AP3D1-211ENST00000591650 MECOMQ03112 1051 aa20.98■□□□□ 0.95
AP3D1-211ENST00000591650 DIXDC1Q155Q3 683 aa20.98■□□□□ 0.95
AP3D1-211ENST00000591650 SPTY2D1Q68D10 685 aaPredicted RBP20.98■□□□□ 0.95
AP3D1-211ENST00000591650 DZIP1Q86YF9 867 aaKnown RBP20.98■□□□□ 0.95
AP3D1-211ENST00000591650 DPF2Q92785 391 aa20.98■□□□□ 0.95
AP3D1-211ENST00000591650 CDK5RAP2Q96SN8 1893 aa20.98■□□□□ 0.95
AP3D1-211ENST00000591650 MAST3O60307 1309 aa20.97■□□□□ 0.95
AP3D1-211ENST00000591650 CHGBP05060 677 aa20.97■□□□□ 0.95
AP3D1-211ENST00000591650 USP17L8P0C7I0 530 aa20.97■□□□□ 0.95
AP3D1-211ENST00000591650 EPS15P42566 896 aa20.97■□□□□ 0.95
AP3D1-211ENST00000591650 KBTBD3Q8NAB2 608 aa20.97■□□□□ 0.95
AP3D1-211ENST00000591650 NSUN4Q96CB9 384 aaKnown RBP20.97■□□□□ 0.95
AP3D1-211ENST00000591650 GPBP1L1Q9HC44 474 aaPredicted RBP20.97■□□□□ 0.95
AP3D1-211ENST00000591650 TRIM6-TRIM34B2RNG4 842 aa20.96■□□□□ 0.95
AP3D1-211ENST00000591650 EGFRP00533 1210 aa20.96■□□□□ 0.95
AP3D1-211ENST00000591650 ZNF280AP59817 542 aaPredicted RBP20.96■□□□□ 0.95
AP3D1-211ENST00000591650 FSD1Q9BTV5 496 aa20.96■□□□□ 0.95
AP3D1-211ENST00000591650 CNOT7Q9UIV1 285 aaKnown RBP20.96■□□□□ 0.95
AP3D1-211ENST00000591650 PCDHAC2Q9Y5I4 1007 aa20.96■□□□□ 0.95
AP3D1-211ENST00000591650 PDE6AP16499 860 aa20.95■□□□□ 0.95
AP3D1-211ENST00000591650 SLFNL1Q499Z3 407 aa20.95■□□□□ 0.95
AP3D1-211ENST00000591650 CNTROBQ8N137 903 aa20.95■□□□□ 0.95
AP3D1-211ENST00000591650 RILPL2Q969X0 211 aa20.95■□□□□ 0.95
AP3D1-211ENST00000591650 EVI5LQ96CN4 794 aa20.95■□□□□ 0.95
AP3D1-211ENST00000591650 SDSP20132 328 aa20.95■□□□□ 0.94
AP3D1-211ENST00000591650 LMOD1P29536 600 aaPredicted RBP20.95■□□□□ 0.94
AP3D1-211ENST00000591650 MAP3K12Q12852 859 aa20.95■□□□□ 0.94
AP3D1-211ENST00000591650 ADGRA1Q86SQ6 560 aa20.95■□□□□ 0.94
AP3D1-211ENST00000591650 MAGEB6Q8N7X4 407 aa20.95■□□□□ 0.94
AP3D1-211ENST00000591650 RFX7Q2KHR2 1363 aa20.94■□□□□ 0.94
AP3D1-211ENST00000591650 FOCADQ5VW36 1801 aa20.94■□□□□ 0.94
AP3D1-211ENST00000591650 MROH7-TTC4A0A0A0MT08 1334 aa20.94■□□□□ 0.94
AP3D1-211ENST00000591650 VEGFAP15692 232 aaPredicted RBP20.94■□□□□ 0.94
AP3D1-211ENST00000591650 CRKP46108 304 aa20.94■□□□□ 0.94
AP3D1-211ENST00000591650 NAA16Q6N069 864 aaPredicted RBP20.94■□□□□ 0.94
AP3D1-211ENST00000591650 SAMD7Q7Z3H4 446 aa20.94■□□□□ 0.94
AP3D1-211ENST00000591650 OGFOD1Q8N543 542 aa20.94■□□□□ 0.94
AP3D1-211ENST00000591650 TRPM4Q8TD43 1214 aa20.94■□□□□ 0.94
AP3D1-211ENST00000591650 TEKT1Q969V4 418 aa20.94■□□□□ 0.94
AP3D1-211ENST00000591650 MYOZ2Q9NPC6 264 aa20.94■□□□□ 0.94
AP3D1-211ENST00000591650 HACL1Q9UJ83 578 aa20.94■□□□□ 0.94
AP3D1-211ENST00000591650 SERPINA10Q9UK55 444 aa20.94■□□□□ 0.94
AP3D1-211ENST00000591650 HDAC9Q9UKV0 1011 aa20.94■□□□□ 0.94
AP3D1-211ENST00000591650 DAGLAQ9Y4D2 1042 aa20.94■□□□□ 0.94
AP3D1-211ENST00000591650 GAKO14976 1311 aa20.93■□□□□ 0.94
AP3D1-211ENST00000591650 KIF3CO14782 793 aa20.93■□□□□ 0.94
AP3D1-211ENST00000591650 CFAP100Q494V2 611 aa20.93■□□□□ 0.94
AP3D1-211ENST00000591650 TBC1D10BQ4KMP7 808 aaPredicted RBP20.93■□□□□ 0.94
AP3D1-211ENST00000591650 BMP2KLQ5H9B9 411 aa20.93■□□□□ 0.94
AP3D1-211ENST00000591650 SLC9C2Q5TAH2 1124 aa20.93■□□□□ 0.94
AP3D1-211ENST00000591650 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.93■□□□□ 0.944e-6■□□□□ 10
AP3D1-211ENST00000591650 TAF1DQ9H5J8 278 aaPredicted RBP20.93■□□□□ 0.94
AP3D1-211ENST00000591650 ZNF532Q9HCE3 1301 aa20.92■□□□□ 0.94
AP3D1-211ENST00000591650 TCRBV5S4A2TA0A5A2 114 aa20.92■□□□□ 0.94
AP3D1-211ENST00000591650 H7C1D1 291 aa20.92■□□□□ 0.94
AP3D1-211ENST00000591650 EPHX2P34913 555 aa20.92■□□□□ 0.94
AP3D1-211ENST00000591650 ADD2P35612 726 aa20.92■□□□□ 0.94
AP3D1-211ENST00000591650 HDLBPQ00341 1268 aaKnown RBP20.92■□□□□ 0.94
AP3D1-211ENST00000591650 KIF4BQ2VIQ3 1234 aa20.92■□□□□ 0.94
AP3D1-211ENST00000591650 IQCA1LA6NCM1 817 aa20.91■□□□□ 0.94
AP3D1-211ENST00000591650 CYP7A1P22680 504 aa20.91■□□□□ 0.94
AP3D1-211ENST00000591650 HHIPL2Q6UWX4 724 aa20.91■□□□□ 0.94
AP3D1-211ENST00000591650 ZBED3Q96IU2 234 aaPredicted RBP20.91■□□□□ 0.94
AP3D1-211ENST00000591650 ADARB2Q9NS39 739 aaKnown RBP20.91■□□□□ 0.94
AP3D1-211ENST00000591650 SPDYE2BA6NHP3 402 aa20.9■□□□□ 0.94
AP3D1-211ENST00000591650 RNF113AO15541 343 aaKnown RBP20.9■□□□□ 0.94
AP3D1-211ENST00000591650 IGSF3O75054 1194 aa20.9■□□□□ 0.94
AP3D1-211ENST00000591650 SPDYE6P0CI01 402 aa20.9■□□□□ 0.94
AP3D1-211ENST00000591650 RBM5P52756 815 aaKnown RBP eCLIP20.9■□□□□ 0.943e-6■■■□□ 17.3
AP3D1-211ENST00000591650 GSTO1P78417 241 aa20.9■□□□□ 0.94
AP3D1-211ENST00000591650 RBM26Q5T8P6 1007 aaKnown RBP20.9■□□□□ 0.94
AP3D1-211ENST00000591650 ZDHHC15Q96MV8 337 aa20.9■□□□□ 0.94
AP3D1-211ENST00000591650 NAV1Q8NEY1 1877 aa20.89■□□□□ 0.94
AP3D1-211ENST00000591650 POTEIP0CG38 1075 aa20.89■□□□□ 0.94
AP3D1-211ENST00000591650 POTEJP0CG39 1038 aa20.89■□□□□ 0.94
AP3D1-211ENST00000591650 HIRAP54198 1017 aaPredicted RBP20.89■□□□□ 0.94
AP3D1-211ENST00000591650 DLGAP5Q15398 846 aa20.89■□□□□ 0.94
AP3D1-211ENST00000591650 APOBEC3HQ6NTF7 200 aaKnown RBP20.89■□□□□ 0.94
AP3D1-211ENST00000591650 MTMR14Q8NCE2 650 aa20.89■□□□□ 0.94
AP3D1-211ENST00000591650 ASTN2O75129 1339 aaPredicted RBP20.89■□□□□ 0.93
AP3D1-211ENST00000591650 DDX60LQ5H9U9 1706 aaKnown RBP20.88■□□□□ 0.93
AP3D1-211ENST00000591650 BTDP43251 543 aa20.88■□□□□ 0.93
AP3D1-211ENST00000591650 MMP14P50281 582 aa20.88■□□□□ 0.93
AP3D1-211ENST00000591650 UBE3CQ15386 1083 aa20.88■□□□□ 0.93
AP3D1-211ENST00000591650 NBPF9Q3BBW0 867 aa20.88■□□□□ 0.93
AP3D1-211ENST00000591650 ZSCAN25Q6NSZ9 544 aa20.88■□□□□ 0.93
AP3D1-211ENST00000591650 SLF2Q8IX21 1173 aa20.88■□□□□ 0.93
AP3D1-211ENST00000591650 MIGA1Q8NAN2 632 aa20.88■□□□□ 0.93
AP3D1-211ENST00000591650 FAM163AQ96GL9 167 aaPredicted RBP20.88■□□□□ 0.93
AP3D1-211ENST00000591650 PRMT6Q96LA8 375 aaPredicted RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms