RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 DDX11L8A8MPP1 907 aa13.14□□□□□ -0.31
SEH1L-208ENST00000590843 NEK4P51957 841 aa13.14□□□□□ -0.31
SEH1L-208ENST00000590843 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.14□□□□□ -0.31
SEH1L-208ENST00000590843 ZYXQ15942 572 aaKnown RBP13.14□□□□□ -0.31
SEH1L-208ENST00000590843 FOXD4L5Q5VV16 416 aaPredicted RBP13.14□□□□□ -0.31
SEH1L-208ENST00000590843 FOXD4L4Q8WXT5 416 aaPredicted RBP13.14□□□□□ -0.31
SEH1L-208ENST00000590843 ORC3Q9UBD5 711 aaPredicted RBP13.14□□□□□ -0.31
SEH1L-208ENST00000590843 RNF113AO15541 343 aaKnown RBP13.14□□□□□ -0.31
SEH1L-208ENST00000590843 JAG2Q9Y219 1238 aa13.14□□□□□ -0.31
SEH1L-208ENST00000590843 RHPN1Q8TCX5 695 aa13.14□□□□□ -0.31
SEH1L-208ENST00000590843 DBNDD1Q9H9R9 158 aa13.14□□□□□ -0.31
SEH1L-208ENST00000590843 RBM28Q9NW13 759 aaKnown RBP13.14□□□□□ -0.31
SEH1L-208ENST00000590843 CFAP45Q9UL16 551 aa13.14□□□□□ -0.31
SEH1L-208ENST00000590843 SKOR2Q2VWA4 1001 aaPredicted RBP13.13□□□□□ -0.31
SEH1L-208ENST00000590843 MLXIPQ9HAP2 919 aa13.13□□□□□ -0.31
SEH1L-208ENST00000590843 SAP30BPQ9UHR5 308 aaKnown RBP13.13□□□□□ -0.31
SEH1L-208ENST00000590843 EXOC6Q8TAG9 804 aa13.13□□□□□ -0.31
SEH1L-208ENST00000590843 PARK7Q99497 189 aaKnown RBP13.13□□□□□ -0.31
SEH1L-208ENST00000590843 FOXD4L1Q9NU39 408 aa13.13□□□□□ -0.31
SEH1L-208ENST00000590843 COL15A1P39059 1388 aa13.13□□□□□ -0.31
SEH1L-208ENST00000590843 SSH2Q76I76 1423 aa13.13□□□□□ -0.31
SEH1L-208ENST00000590843 STX6O43752 255 aa13.13□□□□□ -0.31
SEH1L-208ENST00000590843 RARSP54136 660 aaKnown RBP13.13□□□□□ -0.31
SEH1L-208ENST00000590843 KIF4BQ2VIQ3 1234 aa13.13□□□□□ -0.31
SEH1L-208ENST00000590843 ARHGEF1Q92888 912 aaKnown RBP13.13□□□□□ -0.31
SEH1L-208ENST00000590843 UBA5Q9GZZ9 404 aa13.13□□□□□ -0.31
SEH1L-208ENST00000590843 ARPP21Q9UBL0 812 aaPredicted RBP13.13□□□□□ -0.31
SEH1L-208ENST00000590843 TAF1CQ15572 869 aaPredicted RBP13.13□□□□□ -0.31
SEH1L-208ENST00000590843 CPXCR1Q8N123 301 aa13.13□□□□□ -0.31
SEH1L-208ENST00000590843 FBXO40Q9UH90 709 aa13.13□□□□□ -0.31
SEH1L-208ENST00000590843 MRPL11Q9Y3B7 192 aaKnown RBP13.13□□□□□ -0.31
SEH1L-208ENST00000590843 PNPLA6Q8IY17 1366 aa13.12□□□□□ -0.31
SEH1L-208ENST00000590843 KBTBD13C9JR72 458 aa13.12□□□□□ -0.31
SEH1L-208ENST00000590843 CERKLQ49MI3 558 aaPredicted RBP13.12□□□□□ -0.31
SEH1L-208ENST00000590843 TET3O43151 1660 aa13.12□□□□□ -0.31
SEH1L-208ENST00000590843 SLC8A3P57103 927 aa13.12□□□□□ -0.31
SEH1L-208ENST00000590843 SPATA32Q96LK8 384 aa13.12□□□□□ -0.31
SEH1L-208ENST00000590843 CSRNP1Q96S65 589 aa13.12□□□□□ -0.31
SEH1L-208ENST00000590843 SRP68Q9UHB9 627 aaKnown RBP13.12□□□□□ -0.31
SEH1L-208ENST00000590843 CFAP65Q6ZU64 1925 aaKnown RBP13.12□□□□□ -0.31
SEH1L-208ENST00000590843 PABPN1LA6NDY0 278 aaKnown RBP13.12□□□□□ -0.31
SEH1L-208ENST00000590843 TMOD1P28289 359 aa13.12□□□□□ -0.31
SEH1L-208ENST00000590843 EIF4A1P60842 406 aaKnown RBP13.12□□□□□ -0.31
SEH1L-208ENST00000590843 NCAPD2Q15021 1401 aa13.12□□□□□ -0.31
SEH1L-208ENST00000590843 HEG1Q9ULI3 1381 aa13.11□□□□□ -0.31
SEH1L-208ENST00000590843 FLOT1O75955 427 aa13.11□□□□□ -0.31
SEH1L-208ENST00000590843 METAP2P50579 478 aaKnown RBP eCLIP13.11□□□□□ -0.31
SEH1L-208ENST00000590843 HEATR3Q7Z4Q2 680 aa13.11□□□□□ -0.31
SEH1L-208ENST00000590843 ATP8B2P98198 1209 aa13.11□□□□□ -0.31
SEH1L-208ENST00000590843 CWF19L2Q2TBE0 894 aaKnown RBP13.11□□□□□ -0.31
SEH1L-208ENST00000590843 ATP10DQ9P241 1426 aa13.11□□□□□ -0.31
SEH1L-208ENST00000590843 ARHGEF37A1IGU5 675 aa13.11□□□□□ -0.31
SEH1L-208ENST00000590843 TNPO2O14787 897 aaKnown RBP13.11□□□□□ -0.31
SEH1L-208ENST00000590843 CELF2O95319 508 aaKnown RBP13.11□□□□□ -0.31
SEH1L-208ENST00000590843 MCMDC2Q4G0Z9 681 aa13.11□□□□□ -0.31
SEH1L-208ENST00000590843 SP8Q8IXZ3 490 aa13.11□□□□□ -0.31
SEH1L-208ENST00000590843 REM2Q8IYK8 340 aaPredicted RBP13.11□□□□□ -0.31
SEH1L-208ENST00000590843 NPC1L1Q9UHC9 1359 aa13.11□□□□□ -0.31
SEH1L-208ENST00000590843 SOCS7O14512 581 aa13.11□□□□□ -0.31
SEH1L-208ENST00000590843 TBC1D10BQ4KMP7 808 aaPredicted RBP13.11□□□□□ -0.31
SEH1L-208ENST00000590843 MIGA1Q8NAN2 632 aa13.11□□□□□ -0.31
SEH1L-208ENST00000590843 JPH2Q9BR39 696 aaPredicted RBP13.11□□□□□ -0.31
SEH1L-208ENST00000590843 RBM19Q9Y4C8 960 aaKnown RBP13.11□□□□□ -0.31
SEH1L-208ENST00000590843 PHACTR2O75167 634 aa13.1□□□□□ -0.31
SEH1L-208ENST00000590843 STK3Q13188 491 aa13.1□□□□□ -0.31
SEH1L-208ENST00000590843 DHX8Q14562 1220 aaKnown RBP13.1□□□□□ -0.31
SEH1L-208ENST00000590843 IFT74Q96LB3 600 aa13.1□□□□□ -0.31
SEH1L-208ENST00000590843 GCC2Q8IWJ2 1684 aa13.1□□□□□ -0.31
SEH1L-208ENST00000590843 TTC41PQ6P2S7 1318 aa13.1□□□□□ -0.31
SEH1L-208ENST00000590843 RTN1Q16799 776 aa13.1□□□□□ -0.31
SEH1L-208ENST00000590843 EXOC8Q8IYI6 725 aa13.1□□□□□ -0.31
SEH1L-208ENST00000590843 CRAMP1Q96RY5 1269 aa13.1□□□□□ -0.31
SEH1L-208ENST00000590843 RNF17Q9BXT8 1623 aaKnown RBP13.1□□□□□ -0.31
SEH1L-208ENST00000590843 CAPN15O75808 1086 aa13.1□□□□□ -0.31
SEH1L-208ENST00000590843 ABCB5Q2M3G0 1257 aa13.1□□□□□ -0.31
SEH1L-208ENST00000590843 KMT5BQ4FZB7 885 aa13.1□□□□□ -0.31
SEH1L-208ENST00000590843 EXOC4Q96A65 974 aa13.1□□□□□ -0.31
SEH1L-208ENST00000590843 CCDC97Q96F63 343 aaPredicted RBP13.1□□□□□ -0.31
SEH1L-208ENST00000590843 DIP2CQ9Y2E4 1556 aa13.1□□□□□ -0.31
SEH1L-208ENST00000590843 CLTCQ00610 1675 aaKnown RBP13.1□□□□□ -0.31
SEH1L-208ENST00000590843 CLRN2A0PK11 232 aa13.1□□□□□ -0.31
SEH1L-208ENST00000590843 BIRC2Q13490 618 aa13.1□□□□□ -0.31
SEH1L-208ENST00000590843 C8orf76Q96K31 380 aa13.1□□□□□ -0.31
SEH1L-208ENST00000590843 GTPBP4Q9BZE4 634 aaKnown RBP13.1□□□□□ -0.31
SEH1L-208ENST00000590843 SH2B1Q9NRF2 756 aaPredicted RBP13.1□□□□□ -0.31
SEH1L-208ENST00000590843 A0A0G2JLW4 131 aa13.09□□□□□ -0.31
SEH1L-208ENST00000590843 GNAT1P11488 350 aa13.09□□□□□ -0.31
SEH1L-208ENST00000590843 SCNN1DP51172 638 aa13.09□□□□□ -0.31
SEH1L-208ENST00000590843 DIP2AQ14689 1571 aa13.09□□□□□ -0.31
SEH1L-208ENST00000590843 KIF1BO60333 1816 aa13.09□□□□□ -0.31
SEH1L-208ENST00000590843 ZBTB43O43298 467 aa13.09□□□□□ -0.31
SEH1L-208ENST00000590843 SPATA5Q8NB90 893 aa13.09□□□□□ -0.31
SEH1L-208ENST00000590843 MSANTD4Q8NCY6 345 aa13.09□□□□□ -0.31
SEH1L-208ENST00000590843 CPSF1Q10570 1443 aaKnown RBP13.09□□□□□ -0.31
SEH1L-208ENST00000590843 CDK12Q9NYV4 1490 aaPredicted RBP13.09□□□□□ -0.31
SEH1L-208ENST00000590843 SRGAP2BP0DMP2 458 aa13.09□□□□□ -0.31
SEH1L-208ENST00000590843 UBA7P41226 1012 aa13.09□□□□□ -0.31
SEH1L-208ENST00000590843 ZMYM4Q5VZL5 1548 aa13.09□□□□□ -0.31
SEH1L-208ENST00000590843 A0A1B0GUL7 405 aa13.09□□□□□ -0.31
SEH1L-208ENST00000590843 PRPF40BQ6NWY9 871 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms