RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 MFSD14BQ5SR56 506 aa22.05■■□□□ 1.12
RETREG3-210ENST00000590541 DZIP1LQ8IYY4 767 aaKnown RBP22.05■■□□□ 1.12
RETREG3-210ENST00000590541 TDRD7Q8NHU6 1098 aaKnown RBP22.05■■□□□ 1.12
RETREG3-210ENST00000590541 SH3TC2Q8TF17 1288 aa22.05■■□□□ 1.12
RETREG3-210ENST00000590541 ZNF594Q96JF6 807 aaPredicted RBP22.05■■□□□ 1.12
RETREG3-210ENST00000590541 ARHGAP39Q9C0H5 1083 aa22.05■■□□□ 1.12
RETREG3-210ENST00000590541 TMEM39BQ9GZU3 492 aa22.05■■□□□ 1.12
RETREG3-210ENST00000590541 CHMP3Q9Y3E7 222 aa22.05■■□□□ 1.12
RETREG3-210ENST00000590541 ZSWIM8A7E2V4 1837 aa22.04■■□□□ 1.12
RETREG3-210ENST00000590541 TCP10L2B9ZVM9 353 aa22.04■■□□□ 1.12
RETREG3-210ENST00000590541 PLIN1O60240 522 aa22.04■■□□□ 1.12
RETREG3-210ENST00000590541 ARAP2Q8WZ64 1704 aa22.03■■□□□ 1.12
RETREG3-210ENST00000590541 EPHA10Q5JZY3 1008 aa22.03■■□□□ 1.12
RETREG3-210ENST00000590541 LMBR1LQ6UX01 489 aa22.03■■□□□ 1.12
RETREG3-210ENST00000590541 TLR2O60603 784 aa22.02■■□□□ 1.12
RETREG3-210ENST00000590541 LACTBP83111 547 aaPredicted RBP22.02■■□□□ 1.12
RETREG3-210ENST00000590541 LDHAL6AQ6ZMR3 332 aa22.02■■□□□ 1.12
RETREG3-210ENST00000590541 CSADQ9Y600 493 aa22.02■■□□□ 1.12
RETREG3-210ENST00000590541 SPDYE5A6NIY4 337 aa22.01■■□□□ 1.11
RETREG3-210ENST00000590541 CRKP46108 304 aa22.01■■□□□ 1.11
RETREG3-210ENST00000590541 GYG1P46976 350 aa22.01■■□□□ 1.11
RETREG3-210ENST00000590541 CCDC27Q2M243 656 aa22.01■■□□□ 1.11
RETREG3-210ENST00000590541 SNCAIPQ9Y6H5 919 aa22.01■■□□□ 1.11
RETREG3-210ENST00000590541 TNNI2P48788 182 aa22■■□□□ 1.11
RETREG3-210ENST00000590541 CCDC57Q2TAC2 916 aa22■■□□□ 1.11
RETREG3-210ENST00000590541 BEND3Q5T5X7 828 aa22■■□□□ 1.11
RETREG3-210ENST00000590541 WWC1Q8IX03 1113 aa22■■□□□ 1.11
RETREG3-210ENST00000590541 FAM84BQ96KN1 310 aaPredicted RBP22■■□□□ 1.11
RETREG3-210ENST00000590541 CNNM1Q9NRU3 951 aa22■■□□□ 1.11
RETREG3-210ENST00000590541 SZT2Q5T011 3432 aa22■■□□□ 1.11
RETREG3-210ENST00000590541 BTBD19C9JJ37 291 aa21.99■■□□□ 1.11
RETREG3-210ENST00000590541 HIBADHP31937 336 aaKnown RBP21.99■■□□□ 1.11
RETREG3-210ENST00000590541 UBE4AQ14139 1066 aa21.99■■□□□ 1.11
RETREG3-210ENST00000590541 KIF22Q14807 665 aa21.99■■□□□ 1.11
RETREG3-210ENST00000590541 GRIK5Q16478 980 aa21.99■■□□□ 1.11
RETREG3-210ENST00000590541 NCBP3Q53F19 620 aaKnown RBP21.99■■□□□ 1.11
RETREG3-210ENST00000590541 CHRDL2Q6WN34 429 aa21.99■■□□□ 1.11
RETREG3-210ENST00000590541 SHISA4Q96DD7 197 aa21.99■■□□□ 1.11
RETREG3-210ENST00000590541 ZCCHC17Q9NP64 241 aaKnown RBP21.99■■□□□ 1.11
RETREG3-210ENST00000590541 F6X3S4 739 aa21.98■■□□□ 1.11
RETREG3-210ENST00000590541 CETPP11597 493 aa21.98■■□□□ 1.11
RETREG3-210ENST00000590541 TAF7LQ5H9L4 462 aa21.98■■□□□ 1.11
RETREG3-210ENST00000590541 ERO1BQ86YB8 467 aa21.98■■□□□ 1.11
RETREG3-210ENST00000590541 IRF6O14896 467 aa21.97■■□□□ 1.11
RETREG3-210ENST00000590541 WDHD1O75717 1129 aaPredicted RBP21.97■■□□□ 1.11
RETREG3-210ENST00000590541 GNRH1P01148 92 aa21.97■■□□□ 1.11
RETREG3-210ENST00000590541 MTFR1Q15390 333 aa21.97■■□□□ 1.11
RETREG3-210ENST00000590541 ZKSCAN4Q969J2 545 aaPredicted RBP21.97■■□□□ 1.11
RETREG3-210ENST00000590541 TRIOBPQ9H2D6 2365 aa21.97■■□□□ 1.11
RETREG3-210ENST00000590541 VAMP4O75379 141 aa21.96■■□□□ 1.11
RETREG3-210ENST00000590541 CTGFP29279 349 aa21.96■■□□□ 1.11
RETREG3-210ENST00000590541 CACNB3P54284 484 aa21.96■■□□□ 1.11
RETREG3-210ENST00000590541 PRMT2P55345 433 aa21.96■■□□□ 1.11
RETREG3-210ENST00000590541 PUS3Q9BZE2 481 aaKnown RBP21.96■■□□□ 1.11
RETREG3-210ENST00000590541 MRS2Q9HD23 443 aa21.96■■□□□ 1.11
RETREG3-210ENST00000590541 RBM27Q9P2N5 1060 aaKnown RBP21.96■■□□□ 1.11
RETREG3-210ENST00000590541 IL16Q14005 1332 aa21.96■■□□□ 1.11
RETREG3-210ENST00000590541 CACNA1FO60840 1977 aa21.96■■□□□ 1.11
RETREG3-210ENST00000590541 ECM2O94769 699 aaPredicted RBP21.95■■□□□ 1.1
RETREG3-210ENST00000590541 SNAPC2Q13487 334 aa21.95■■□□□ 1.1
RETREG3-210ENST00000590541 CCDC184Q52MB2 194 aa21.95■■□□□ 1.1
RETREG3-210ENST00000590541 C17orf99Q6UX52 265 aa21.95■■□□□ 1.1
RETREG3-210ENST00000590541 WRNIP1Q96S55 665 aa21.95■■□□□ 1.1
RETREG3-210ENST00000590541 CEP290O15078 2479 aa21.95■■□□□ 1.1
RETREG3-210ENST00000590541 GRM8O00222 908 aa21.94■■□□□ 1.1
RETREG3-210ENST00000590541 HDLBPQ00341 1268 aaKnown RBP21.94■■□□□ 1.1
RETREG3-210ENST00000590541 PPIL2Q13356 520 aa21.94■■□□□ 1.1
RETREG3-210ENST00000590541 FANCIQ9NVI1 1328 aa21.94■■□□□ 1.1
RETREG3-210ENST00000590541 FBXO33Q7Z6M2 555 aa21.93■■□□□ 1.1
RETREG3-210ENST00000590541 DPF3Q92784 378 aa21.93■■□□□ 1.1
RETREG3-210ENST00000590541 IQSEC3Q9UPP2 1182 aaPredicted RBP21.93■■□□□ 1.1
RETREG3-210ENST00000590541 UBE2Q1Q7Z7E8 422 aa21.92■■□□□ 1.1
RETREG3-210ENST00000590541 TRIM47Q96LD4 638 aa21.92■■□□□ 1.1
RETREG3-210ENST00000590541 SRRDQ9UH36 339 aa21.92■■□□□ 1.1
RETREG3-210ENST00000590541 CPA4Q9UI42 421 aa21.92■■□□□ 1.1
RETREG3-210ENST00000590541 PSMC4P43686 418 aa21.91■■□□□ 1.1
RETREG3-210ENST00000590541 CHAF1AQ13111 956 aaPredicted RBP21.91■■□□□ 1.1
RETREG3-210ENST00000590541 FAM83AQ86UY5 434 aa21.91■■□□□ 1.1
RETREG3-210ENST00000590541 TEKT1Q969V4 418 aa21.91■■□□□ 1.1
RETREG3-210ENST00000590541 PRO3102Q9H379 93 aa21.91■■□□□ 1.1
RETREG3-210ENST00000590541 RIPOR2Q9Y4F9 1068 aa21.91■■□□□ 1.1
RETREG3-210ENST00000590541 ADGRA2Q96PE1 1338 aa21.9■■□□□ 1.1
RETREG3-210ENST00000590541 OSBPP22059 807 aa21.9■■□□□ 1.1
RETREG3-210ENST00000590541 PPATQ06203 517 aa21.9■■□□□ 1.1
RETREG3-210ENST00000590541 APOBEC3HQ6NTF7 200 aaKnown RBP21.9■■□□□ 1.1
RETREG3-210ENST00000590541 KAZALD1Q96I82 304 aa21.9■■□□□ 1.1
RETREG3-210ENST00000590541 ZDHHC15Q96MV8 337 aa21.9■■□□□ 1.1
RETREG3-210ENST00000590541 GRK4P32298 578 aa21.89■■□□□ 1.09
RETREG3-210ENST00000590541 GJA8P48165 433 aa21.89■■□□□ 1.09
RETREG3-210ENST00000590541 EXOSC9Q06265 439 aaKnown RBP21.89■■□□□ 1.09
RETREG3-210ENST00000590541 FKBP1CQ5VVH2 108 aa21.89■■□□□ 1.09
RETREG3-210ENST00000590541 ANKRD23Q86SG2 305 aa21.89■■□□□ 1.09
RETREG3-210ENST00000590541 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.89■■□□□ 1.09
RETREG3-210ENST00000590541 NKX2-3Q8TAU0 364 aa21.89■■□□□ 1.09
RETREG3-210ENST00000590541 TBC1D22AQ8WUA7 517 aa21.89■■□□□ 1.09
RETREG3-210ENST00000590541 SUCLG2Q96I99 432 aa21.89■■□□□ 1.09
RETREG3-210ENST00000590541 MRIQ9BWK5 157 aa21.89■■□□□ 1.09
RETREG3-210ENST00000590541 C9orf78Q9NZ63 289 aaPredicted RBP21.89■■□□□ 1.09
RETREG3-210ENST00000590541 RPAP1Q9BWH6 1393 aaPredicted RBP21.88■■□□□ 1.09
RETREG3-210ENST00000590541 MROH5Q6ZUA9 1318 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms