RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 PHKA1P46020 1223 aa21.05■□□□□ 0.96
CROCCP3-203ENST00000589964 MMP14P50281 582 aa21.05■□□□□ 0.96
CROCCP3-203ENST00000589964 TMEM39BQ9GZU3 492 aa21.05■□□□□ 0.96
CROCCP3-203ENST00000589964 SERPINA10Q9UK55 444 aa21.05■□□□□ 0.96
CROCCP3-203ENST00000589964 ATP2B3Q16720 1220 aa21.04■□□□□ 0.96
CROCCP3-203ENST00000589964 USP2O75604 605 aaPredicted RBP21.03■□□□□ 0.96
CROCCP3-203ENST00000589964 TBC1D8O95759 1140 aa21.03■□□□□ 0.96
CROCCP3-203ENST00000589964 IFIT1P09914 478 aaKnown RBP21.03■□□□□ 0.96
CROCCP3-203ENST00000589964 RLBP1P12271 317 aa21.03■□□□□ 0.96
CROCCP3-203ENST00000589964 CAVIN4Q5BKX8 364 aa21.03■□□□□ 0.96
CROCCP3-203ENST00000589964 SPRYD7Q5W111 196 aa21.03■□□□□ 0.96
CROCCP3-203ENST00000589964 TMEM57Q8N5G2 664 aa21.03■□□□□ 0.96
CROCCP3-203ENST00000589964 CNKSR2Q8WXI2 1034 aa21.03■□□□□ 0.96
CROCCP3-203ENST00000589964 LPIN2Q92539 896 aa21.03■□□□□ 0.96
CROCCP3-203ENST00000589964 ARHGAP45Q92619 1136 aa21.03■□□□□ 0.96
CROCCP3-203ENST00000589964 AKAP11Q9UKA4 1901 aa21.03■□□□□ 0.96
CROCCP3-203ENST00000589964 PNMA6EA0A0J9YXQ4 647 aa21.02■□□□□ 0.96
CROCCP3-203ENST00000589964 FRAT2O75474 233 aaPredicted RBP21.02■□□□□ 0.96
CROCCP3-203ENST00000589964 CIAO1O76071 339 aa21.02■□□□□ 0.96
CROCCP3-203ENST00000589964 SLC5A1P13866 664 aa21.02■□□□□ 0.96
CROCCP3-203ENST00000589964 NF2P35240 595 aa21.02■□□□□ 0.96
CROCCP3-203ENST00000589964 DIXDC1Q155Q3 683 aa21.02■□□□□ 0.96
CROCCP3-203ENST00000589964 APOBEC3HQ6NTF7 200 aaKnown RBP21.02■□□□□ 0.96
CROCCP3-203ENST00000589964 ATF7IPQ6VMQ6 1270 aa21.02■□□□□ 0.96
CROCCP3-203ENST00000589964 ARMC9Q7Z3E5 817 aa21.02■□□□□ 0.96
CROCCP3-203ENST00000589964 COPRSQ9NQ92 184 aa21.02■□□□□ 0.96
CROCCP3-203ENST00000589964 PRDX5P30044 214 aa21.01■□□□□ 0.95
CROCCP3-203ENST00000589964 MAP3K11Q16584 847 aa21.01■□□□□ 0.95
CROCCP3-203ENST00000589964 SAGE1Q9NXZ1 904 aa21.01■□□□□ 0.95
CROCCP3-203ENST00000589964 MYH13Q9UKX3 1938 aa21■□□□□ 0.95
CROCCP3-203ENST00000589964 TFCP2Q12800 502 aa21■□□□□ 0.95
CROCCP3-203ENST00000589964 DGKZQ13574 1117 aa21■□□□□ 0.95
CROCCP3-203ENST00000589964 CEP126Q9P2H0 1117 aa21■□□□□ 0.95
CROCCP3-203ENST00000589964 PPP2R3BQ9Y5P8 575 aa21■□□□□ 0.95
CROCCP3-203ENST00000589964 SRGAP3O43295 1099 aa20.99■□□□□ 0.95
CROCCP3-203ENST00000589964 MYO1BO43795 1136 aa20.99■□□□□ 0.95
CROCCP3-203ENST00000589964 TIMM10P62072 90 aa20.99■□□□□ 0.95
CROCCP3-203ENST00000589964 WNK4Q96J92 1243 aa20.99■□□□□ 0.95
CROCCP3-203ENST00000589964 C1orf115Q9H7X2 142 aa20.99■□□□□ 0.95
CROCCP3-203ENST00000589964 MTX1Q13505 466 aa20.98■□□□□ 0.95
CROCCP3-203ENST00000589964 TEKT1Q969V4 418 aa20.98■□□□□ 0.95
CROCCP3-203ENST00000589964 ZDHHC15Q96MV8 337 aa20.98■□□□□ 0.95
CROCCP3-203ENST00000589964 IGF2BP3O00425 579 aaKnown RBP eCLIP20.97■□□□□ 0.95
CROCCP3-203ENST00000589964 IL15P40933 162 aaPredicted RBP20.97■□□□□ 0.95
CROCCP3-203ENST00000589964 TM4SF4P48230 202 aa20.97■□□□□ 0.95
CROCCP3-203ENST00000589964 RASGRF1Q13972 1273 aa20.97■□□□□ 0.95
CROCCP3-203ENST00000589964 PI16Q6UXB8 463 aa20.97■□□□□ 0.95
CROCCP3-203ENST00000589964 TBC1D22AQ8WUA7 517 aa20.97■□□□□ 0.95
CROCCP3-203ENST00000589964 DAGLAQ9Y4D2 1042 aa20.97■□□□□ 0.95
CROCCP3-203ENST00000589964 CCDC85CA6NKD9 419 aa20.96■□□□□ 0.95
CROCCP3-203ENST00000589964 GNAI3P08754 354 aa20.96■□□□□ 0.95
CROCCP3-203ENST00000589964 CCDC102BQ68D86 513 aa20.96■□□□□ 0.95
CROCCP3-203ENST00000589964 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.96■□□□□ 0.95
CROCCP3-203ENST00000589964 SLC10A4Q96EP9 437 aa20.96■□□□□ 0.95
CROCCP3-203ENST00000589964 ELP3Q9H9T3 547 aa20.96■□□□□ 0.95
CROCCP3-203ENST00000589964 SLURP2P0DP57 97 aa20.95■□□□□ 0.94
CROCCP3-203ENST00000589964 HDLBPQ00341 1268 aaKnown RBP20.95■□□□□ 0.94
CROCCP3-203ENST00000589964 NFIAQ12857 509 aa20.95■□□□□ 0.94
CROCCP3-203ENST00000589964 ZNF296Q8WUU4 475 aaPredicted RBP20.95■□□□□ 0.94
CROCCP3-203ENST00000589964 FBXO3Q9UK99 471 aa20.95■□□□□ 0.94
CROCCP3-203ENST00000589964 PPP1R12BO60237 982 aaPredicted RBP20.94■□□□□ 0.94
CROCCP3-203ENST00000589964 CAP1Q01518 475 aa20.94■□□□□ 0.94
CROCCP3-203ENST00000589964 SUPT20HL1Q3ZLR7 823 aa20.94■□□□□ 0.94
CROCCP3-203ENST00000589964 ZFPM1Q8IX07 1006 aa20.94■□□□□ 0.94
CROCCP3-203ENST00000589964 ZNF384Q8TF68 577 aa20.94■□□□□ 0.94
CROCCP3-203ENST00000589964 PTPN18Q99952 460 aa20.94■□□□□ 0.94
CROCCP3-203ENST00000589964 LAMB1P07942 1786 aa20.93■□□□□ 0.94
CROCCP3-203ENST00000589964 A0A1B0GUL7 405 aa20.93■□□□□ 0.94
CROCCP3-203ENST00000589964 IPO8O15397 1037 aaKnown RBP20.93■□□□□ 0.94
CROCCP3-203ENST00000589964 GNAI2P04899 355 aa20.93■□□□□ 0.94
CROCCP3-203ENST00000589964 VGLL4Q14135 290 aa20.93■□□□□ 0.94
CROCCP3-203ENST00000589964 ZKSCAN2Q63HK3 967 aa20.93■□□□□ 0.94
CROCCP3-203ENST00000589964 CDC42EP5Q6NZY7 148 aa20.93■□□□□ 0.94
CROCCP3-203ENST00000589964 WDR66Q8TBY9 1149 aa20.93■□□□□ 0.94
CROCCP3-203ENST00000589964 XAGE2Q96GT9 111 aa20.93■□□□□ 0.94
CROCCP3-203ENST00000589964 IREB2P48200 963 aaKnown RBP20.91■□□□□ 0.94
CROCCP3-203ENST00000589964 TCP10Q12799 353 aa20.91■□□□□ 0.94
CROCCP3-203ENST00000589964 TNFAIP1Q13829 316 aa20.91■□□□□ 0.94
CROCCP3-203ENST00000589964 ZBED9Q6R2W3 1325 aa20.91■□□□□ 0.94
CROCCP3-203ENST00000589964 HHIPL2Q6UWX4 724 aa20.91■□□□□ 0.94
CROCCP3-203ENST00000589964 IFNL1Q8IU54 200 aa20.91■□□□□ 0.94
CROCCP3-203ENST00000589964 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.91■□□□□ 0.94
CROCCP3-203ENST00000589964 OPTNQ96CV9 577 aa20.91■□□□□ 0.94
CROCCP3-203ENST00000589964 FAM198AQ9UFP1 575 aa20.91■□□□□ 0.94
CROCCP3-203ENST00000589964 GPR25O00155 361 aa20.9■□□□□ 0.94
CROCCP3-203ENST00000589964 POLA2Q14181 598 aa20.9■□□□□ 0.94
CROCCP3-203ENST00000589964 PANK1Q8TE04 598 aa20.9■□□□□ 0.94
CROCCP3-203ENST00000589964 ZKSCAN4Q969J2 545 aaPredicted RBP20.9■□□□□ 0.94
CROCCP3-203ENST00000589964 MRIQ9BWK5 157 aa20.9■□□□□ 0.94
CROCCP3-203ENST00000589964 SUGT1Q9Y2Z0 365 aa20.9■□□□□ 0.94
CROCCP3-203ENST00000589964 SNCAIPQ9Y6H5 919 aa20.9■□□□□ 0.94
CROCCP3-203ENST00000589964 HTTP42858 3142 aa20.9■□□□□ 0.94
CROCCP3-203ENST00000589964 RFX7Q2KHR2 1363 aa20.89■□□□□ 0.93
CROCCP3-203ENST00000589964 SALL1Q9NSC2 1324 aa20.89■□□□□ 0.93
CROCCP3-203ENST00000589964 LDHBP07195 334 aaKnown RBP20.89■□□□□ 0.93
CROCCP3-203ENST00000589964 TBC1D9Q6ZT07 1266 aa20.89■□□□□ 0.93
CROCCP3-203ENST00000589964 MIGA2Q7L4E1 593 aa20.89■□□□□ 0.93
CROCCP3-203ENST00000589964 ANKRD13AQ8IZ07 590 aa20.89■□□□□ 0.93
CROCCP3-203ENST00000589964 BRI3BPQ8WY22 251 aa20.89■□□□□ 0.93
CROCCP3-203ENST00000589964 MS4A4AQ96JQ5 239 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms