RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 CENPBP07199 599 aaPredicted RBP12.91□□□□□ -0.34
SDF2-208ENST00000589788 UBE4AQ14139 1066 aa12.91□□□□□ -0.34
SDF2-208ENST00000589788 LRRC24Q50LG9 513 aa12.91□□□□□ -0.34
SDF2-208ENST00000589788 TYW1BQ6NUM6 668 aa12.91□□□□□ -0.34
SDF2-208ENST00000589788 C15orf52Q6ZUT6 534 aaKnown RBP12.91□□□□□ -0.34
SDF2-208ENST00000589788 ZNF804AQ7Z570 1209 aa12.91□□□□□ -0.34
SDF2-208ENST00000589788 ITPRIPQ8IWB1 547 aa12.91□□□□□ -0.34
SDF2-208ENST00000589788 RCAN3Q9UKA8 241 aa12.91□□□□□ -0.34
SDF2-208ENST00000589788 ADAMTSL1Q8N6G6 1762 aa12.9□□□□□ -0.34
SDF2-208ENST00000589788 GNAI2P04899 355 aa12.9□□□□□ -0.34
SDF2-208ENST00000589788 MS4A1P11836 297 aa12.9□□□□□ -0.34
SDF2-208ENST00000589788 FOSBP53539 338 aa12.9□□□□□ -0.34
SDF2-208ENST00000589788 MAP1SQ66K74 1059 aaPredicted RBP12.9□□□□□ -0.34
SDF2-208ENST00000589788 RSBN1LQ6PCB5 846 aaPredicted RBP12.9□□□□□ -0.34
SDF2-208ENST00000589788 AGBL3Q8NEM8 1001 aa12.9□□□□□ -0.34
SDF2-208ENST00000589788 KHSRPQ92945 711 aaKnown RBP eCLIP12.9□□□□□ -0.34
SDF2-208ENST00000589788 EYA2O00167 538 aa12.89□□□□□ -0.35
SDF2-208ENST00000589788 RFX5P48382 616 aaPredicted RBP12.89□□□□□ -0.35
SDF2-208ENST00000589788 PTPN12Q05209 780 aaKnown RBP12.89□□□□□ -0.35
SDF2-208ENST00000589788 CNTROBQ8N137 903 aa12.89□□□□□ -0.35
SDF2-208ENST00000589788 SIL1Q9H173 461 aa12.89□□□□□ -0.35
SDF2-208ENST00000589788 CD209Q9NNX6 404 aa12.89□□□□□ -0.35
SDF2-208ENST00000589788 SHTN1A0MZ66 631 aa12.88□□□□□ -0.35
SDF2-208ENST00000589788 SRGAP3O43295 1099 aa12.88□□□□□ -0.35
SDF2-208ENST00000589788 PDE8BO95263 885 aa12.88□□□□□ -0.35
SDF2-208ENST00000589788 RLBP1P12271 317 aa12.88□□□□□ -0.35
SDF2-208ENST00000589788 GTF2IP78347 998 aa12.88□□□□□ -0.35
SDF2-208ENST00000589788 STRIP1Q5VSL9 837 aa12.88□□□□□ -0.35
SDF2-208ENST00000589788 TTLL5Q6EMB2 1281 aa12.88□□□□□ -0.35
SDF2-208ENST00000589788 PARP9Q8IXQ6 854 aa12.88□□□□□ -0.35
SDF2-208ENST00000589788 ZNF609O15014 1411 aa12.88□□□□□ -0.35
SDF2-208ENST00000589788 MYO3BQ8WXR4 1341 aa12.88□□□□□ -0.35
SDF2-208ENST00000589788 IRS2Q9Y4H2 1338 aa12.88□□□□□ -0.35
SDF2-208ENST00000589788 CIAO1O76071 339 aa12.88□□□□□ -0.35
SDF2-208ENST00000589788 NUDT7P0C024 238 aa12.88□□□□□ -0.35
SDF2-208ENST00000589788 USP17L8P0C7I0 530 aa12.88□□□□□ -0.35
SDF2-208ENST00000589788 HIBADHP31937 336 aaKnown RBP12.88□□□□□ -0.35
SDF2-208ENST00000589788 PUM3Q15397 648 aaKnown RBP12.88□□□□□ -0.35
SDF2-208ENST00000589788 TBC1D10BQ4KMP7 808 aaPredicted RBP12.88□□□□□ -0.35
SDF2-208ENST00000589788 CAVIN4Q5BKX8 364 aa12.88□□□□□ -0.35
SDF2-208ENST00000589788 DACT2Q5SW24 774 aa12.88□□□□□ -0.35
SDF2-208ENST00000589788 GPR153Q6NV75 609 aa12.88□□□□□ -0.35
SDF2-208ENST00000589788 SAMD7Q7Z3H4 446 aa12.88□□□□□ -0.35
SDF2-208ENST00000589788 VPS37DQ86XT2 251 aa12.88□□□□□ -0.35
SDF2-208ENST00000589788 TRPM4Q8TD43 1214 aa12.88□□□□□ -0.35
SDF2-208ENST00000589788 PANK1Q8TE04 598 aa12.88□□□□□ -0.35
SDF2-208ENST00000589788 ITGBL1O95965 494 aaPredicted RBP12.87□□□□□ -0.35
SDF2-208ENST00000589788 IFIT1P09914 478 aaKnown RBP12.87□□□□□ -0.35
SDF2-208ENST00000589788 IL1R1P14778 569 aa12.87□□□□□ -0.35
SDF2-208ENST00000589788 IL15P40933 162 aaPredicted RBP12.87□□□□□ -0.35
SDF2-208ENST00000589788 GYG1P46976 350 aa12.87□□□□□ -0.35
SDF2-208ENST00000589788 MTX1Q13505 466 aa12.87□□□□□ -0.35
SDF2-208ENST00000589788 KIF4BQ2VIQ3 1234 aa12.87□□□□□ -0.35
SDF2-208ENST00000589788 ARSIQ5FYB1 569 aa12.87□□□□□ -0.35
SDF2-208ENST00000589788 ATG9AQ7Z3C6 839 aa12.87□□□□□ -0.35
SDF2-208ENST00000589788 OGFOD1Q8N543 542 aa12.87□□□□□ -0.35
SDF2-208ENST00000589788 VGLL2Q8N8G2 317 aa12.87□□□□□ -0.35
SDF2-208ENST00000589788 GMLQ99445 158 aa12.87□□□□□ -0.35
SDF2-208ENST00000589788 MXD3Q9BW11 206 aa12.87□□□□□ -0.35
SDF2-208ENST00000589788 COPRSQ9NQ92 184 aa12.87□□□□□ -0.35
SDF2-208ENST00000589788 CEP126Q9P2H0 1117 aa12.87□□□□□ -0.35
SDF2-208ENST00000589788 PA2G4Q9UQ80 394 aaKnown RBP12.87□□□□□ -0.35
SDF2-208ENST00000589788 SLC5A1P13866 664 aa12.86□□□□□ -0.35
SDF2-208ENST00000589788 HIRAP54198 1017 aaPredicted RBP12.86□□□□□ -0.35
SDF2-208ENST00000589788 ZNF280AP59817 542 aaPredicted RBP12.86□□□□□ -0.35
SDF2-208ENST00000589788 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.86□□□□□ -0.35
SDF2-208ENST00000589788 FAM84BQ96KN1 310 aaPredicted RBP12.86□□□□□ -0.35
SDF2-208ENST00000589788 HDAC9Q9UKV0 1011 aa12.86□□□□□ -0.35
SDF2-208ENST00000589788 ZNF646O15015 1829 aaPredicted RBP12.85□□□□□ -0.35
SDF2-208ENST00000589788 PASKQ96RG2 1323 aa12.85□□□□□ -0.35
SDF2-208ENST00000589788 ZBTB7BO15156 539 aaPredicted RBP12.85□□□□□ -0.35
SDF2-208ENST00000589788 FRAT2O75474 233 aaPredicted RBP12.85□□□□□ -0.35
SDF2-208ENST00000589788 EGFRP00533 1210 aa12.85□□□□□ -0.35
SDF2-208ENST00000589788 HTRA3P83110 453 aa12.85□□□□□ -0.35
SDF2-208ENST00000589788 LPIN2Q92539 896 aa12.85□□□□□ -0.35
SDF2-208ENST00000589788 ZSWIM6Q9HCJ5 1215 aa12.85□□□□□ -0.35
SDF2-208ENST00000589788 MYOZ2Q9NPC6 264 aa12.85□□□□□ -0.35
SDF2-208ENST00000589788 PGAP2Q9UHJ9 254 aa12.85□□□□□ -0.35
SDF2-208ENST00000589788 SASH1O94885 1247 aa12.84□□□□□ -0.35
SDF2-208ENST00000589788 MMP14P50281 582 aa12.84□□□□□ -0.35
SDF2-208ENST00000589788 ATP2B3Q16720 1220 aa12.84□□□□□ -0.35
SDF2-208ENST00000589788 CDC37L1Q7L3B6 337 aa12.84□□□□□ -0.35
SDF2-208ENST00000589788 FBXO33Q7Z6M2 555 aa12.84□□□□□ -0.35
SDF2-208ENST00000589788 KIAA0825Q8IV33 1275 aa12.84□□□□□ -0.35
SDF2-208ENST00000589788 IL27Q8NEV9 243 aa12.84□□□□□ -0.35
SDF2-208ENST00000589788 TDRD7Q8NHU6 1098 aaKnown RBP12.84□□□□□ -0.35
SDF2-208ENST00000589788 DCPSQ96C86 337 aaKnown RBP12.84□□□□□ -0.35
SDF2-208ENST00000589788 C1orf115Q9H7X2 142 aa12.84□□□□□ -0.35
SDF2-208ENST00000589788 SCUBE2Q9NQ36 999 aa12.84□□□□□ -0.35
SDF2-208ENST00000589788 JAG2Q9Y219 1238 aa12.84□□□□□ -0.35
SDF2-208ENST00000589788 PNMA6EA0A0J9YXQ4 647 aa12.83□□□□□ -0.36
SDF2-208ENST00000589788 TMEM88BA6NKF7 163 aa12.83□□□□□ -0.36
SDF2-208ENST00000589788 FGFR2P21802 821 aa12.83□□□□□ -0.36
SDF2-208ENST00000589788 BCAMP50895 628 aa12.83□□□□□ -0.36
SDF2-208ENST00000589788 FKBP1AP62942 108 aaKnown RBP12.83□□□□□ -0.36
SDF2-208ENST00000589788 ATP8B2P98198 1209 aa12.83□□□□□ -0.36
SDF2-208ENST00000589788 G3BP1Q13283 466 aaKnown RBP eCLIP12.83□□□□□ -0.36
SDF2-208ENST00000589788 MVPQ14764 893 aaKnown RBP12.83□□□□□ -0.36
SDF2-208ENST00000589788 GLIS2Q9BZE0 524 aaPredicted RBP12.83□□□□□ -0.36
SDF2-208ENST00000589788 FAM117AQ9C073 453 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms