RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 TTLL5Q6EMB2 1281 aa12.64□□□□□ -0.39
NEDD4L-224ENST00000588712 SNED1Q8TER0 1413 aa12.64□□□□□ -0.39
NEDD4L-224ENST00000588712 NSUN4Q96CB9 384 aaKnown RBP12.64□□□□□ -0.39
NEDD4L-224ENST00000588712 NOL10Q9BSC4 688 aaKnown RBP12.64□□□□□ -0.39
NEDD4L-224ENST00000588712 PUS7LQ9H0K6 701 aaKnown RBP12.64□□□□□ -0.39
NEDD4L-224ENST00000588712 M0R2C6 588 aa12.63□□□□□ -0.39
NEDD4L-224ENST00000588712 HSPD1P10809 573 aaKnown RBP12.63□□□□□ -0.39
NEDD4L-224ENST00000588712 PTH1RQ03431 593 aa12.63□□□□□ -0.39
NEDD4L-224ENST00000588712 TSGA10IPQ3SY00 556 aa12.63□□□□□ -0.39
NEDD4L-224ENST00000588712 MFSD14BQ5SR56 506 aa12.63□□□□□ -0.39
NEDD4L-224ENST00000588712 KCNB2Q92953 911 aa12.63□□□□□ -0.39
NEDD4L-224ENST00000588712 NACAP1Q9BZK3 213 aa12.63□□□□□ -0.39
NEDD4L-224ENST00000588712 RBM8AQ9Y5S9 174 aaKnown RBP12.63□□□□□ -0.39
NEDD4L-224ENST00000588712 MAGEB6P1A0A0J9YX57 407 aa12.63□□□□□ -0.39
NEDD4L-224ENST00000588712 PATL2C9JE40 543 aaKnown RBP12.63□□□□□ -0.39
NEDD4L-224ENST00000588712 PPIP5K2O43314 1243 aa12.63□□□□□ -0.39
NEDD4L-224ENST00000588712 BAG3O95817 575 aa12.63□□□□□ -0.39
NEDD4L-224ENST00000588712 PSMA5P28066 241 aa12.63□□□□□ -0.39
NEDD4L-224ENST00000588712 GTF2IP78347 998 aa12.63□□□□□ -0.39
NEDD4L-224ENST00000588712 MECOMQ03112 1051 aa12.63□□□□□ -0.39
NEDD4L-224ENST00000588712 STRIP1Q5VSL9 837 aa12.63□□□□□ -0.39
NEDD4L-224ENST00000588712 IPO9Q96P70 1041 aaKnown RBP12.63□□□□□ -0.39
NEDD4L-224ENST00000588712 STRBPQ96SI9 672 aaKnown RBP12.63□□□□□ -0.39
NEDD4L-224ENST00000588712 CCDC88AQ3V6T2 1871 aa12.63□□□□□ -0.39
NEDD4L-224ENST00000588712 KIAA1551Q9HCM1 1747 aa12.62□□□□□ -0.39
NEDD4L-224ENST00000588712 ST18O60284 1047 aa12.62□□□□□ -0.39
NEDD4L-224ENST00000588712 SLC51AQ86UW1 340 aa12.62□□□□□ -0.39
NEDD4L-224ENST00000588712 ECE2O60344 883 aa12.61□□□□□ -0.39
NEDD4L-224ENST00000588712 ALX1Q15699 326 aa12.61□□□□□ -0.39
NEDD4L-224ENST00000588712 DOK7Q18PE1 504 aa12.61□□□□□ -0.39
NEDD4L-224ENST00000588712 CREB3L3Q68CJ9 461 aa12.61□□□□□ -0.39
NEDD4L-224ENST00000588712 CCDC129Q6ZRS4 1044 aa12.61□□□□□ -0.39
NEDD4L-224ENST00000588712 FAM163AQ96GL9 167 aaPredicted RBP12.61□□□□□ -0.39
NEDD4L-224ENST00000588712 MRIQ9BWK5 157 aa12.61□□□□□ -0.39
NEDD4L-224ENST00000588712 TM6SF1Q9BZW5 370 aa12.61□□□□□ -0.39
NEDD4L-224ENST00000588712 TAOK3Q9H2K8 898 aa12.61□□□□□ -0.39
NEDD4L-224ENST00000588712 BCS1LQ9Y276 419 aa12.61□□□□□ -0.39
NEDD4L-224ENST00000588712 ZMYM6O95789 1325 aa12.61□□□□□ -0.39
NEDD4L-224ENST00000588712 LTBP3Q9NS15 1303 aa12.61□□□□□ -0.39
NEDD4L-224ENST00000588712 USP17L3A6NCW0 530 aa12.61□□□□□ -0.39
NEDD4L-224ENST00000588712 USP17L4A6NCW7 530 aa12.61□□□□□ -0.39
NEDD4L-224ENST00000588712 APPP05067 770 aa12.61□□□□□ -0.39
NEDD4L-224ENST00000588712 PLCG2P16885 1265 aa12.61□□□□□ -0.39
NEDD4L-224ENST00000588712 PRDX5P30044 214 aa12.61□□□□□ -0.39
NEDD4L-224ENST00000588712 AOC3Q16853 763 aa12.61□□□□□ -0.39
NEDD4L-224ENST00000588712 IMMTQ16891 758 aaKnown RBP12.61□□□□□ -0.39
NEDD4L-224ENST00000588712 GIMAP6Q6P9H5 292 aa12.61□□□□□ -0.39
NEDD4L-224ENST00000588712 USP17L1Q7RTZ2 530 aa12.61□□□□□ -0.39
NEDD4L-224ENST00000588712 LARGE2Q8N3Y3 721 aa12.61□□□□□ -0.39
NEDD4L-224ENST00000588712 SNX21Q969T3 373 aa12.61□□□□□ -0.39
NEDD4L-224ENST00000588712 KIF2CQ99661 725 aa12.61□□□□□ -0.39
NEDD4L-224ENST00000588712 MYO3BQ8WXR4 1341 aa12.61□□□□□ -0.39
NEDD4L-224ENST00000588712 MBD4O95243 580 aa12.6□□□□□ -0.39
NEDD4L-224ENST00000588712 CHGBP05060 677 aa12.6□□□□□ -0.39
NEDD4L-224ENST00000588712 MCM2P49736 904 aa12.6□□□□□ -0.39
NEDD4L-224ENST00000588712 BRCA1P38398 1863 aaKnown RBP12.6□□□□□ -0.39
NEDD4L-224ENST00000588712 MYO5AQ9Y4I1 1855 aaKnown RBP12.6□□□□□ -0.39
NEDD4L-224ENST00000588712 MAST2Q6P0Q8 1798 aa12.6□□□□□ -0.39
NEDD4L-224ENST00000588712 SLC27A2O14975 620 aa12.6□□□□□ -0.39
NEDD4L-224ENST00000588712 HMGB1P09429 215 aaKnown RBP12.6□□□□□ -0.39
NEDD4L-224ENST00000588712 IARSP41252 1262 aaKnown RBP12.6□□□□□ -0.39
NEDD4L-224ENST00000588712 MMP14P50281 582 aa12.6□□□□□ -0.39
NEDD4L-224ENST00000588712 PPP4CP60510 307 aa12.6□□□□□ -0.39
NEDD4L-224ENST00000588712 SLFNL1Q499Z3 407 aa12.6□□□□□ -0.39
NEDD4L-224ENST00000588712 JDP2Q8WYK2 163 aa12.6□□□□□ -0.39
NEDD4L-224ENST00000588712 FBXW7Q969H0 707 aa12.6□□□□□ -0.39
NEDD4L-224ENST00000588712 CRNKL1Q9BZJ0 848 aaKnown RBP12.6□□□□□ -0.39
NEDD4L-224ENST00000588712 DBNDD1Q9H9R9 158 aa12.6□□□□□ -0.39
NEDD4L-224ENST00000588712 SNX14Q9Y5W7 946 aa12.6□□□□□ -0.39
NEDD4L-224ENST00000588712 ZNF213O14771 459 aa12.59□□□□□ -0.39
NEDD4L-224ENST00000588712 HDLBPQ00341 1268 aaKnown RBP12.59□□□□□ -0.39
NEDD4L-224ENST00000588712 HSCBQ8IWL3 235 aa12.59□□□□□ -0.39
NEDD4L-224ENST00000588712 NIM1KQ8IY84 436 aa12.59□□□□□ -0.39
NEDD4L-224ENST00000588712 ZNRF3Q9ULT6 936 aa12.59□□□□□ -0.39
NEDD4L-224ENST00000588712 JAG2Q9Y219 1238 aa12.59□□□□□ -0.39
NEDD4L-224ENST00000588712 SLC4A4Q9Y6R1 1079 aa12.59□□□□□ -0.39
NEDD4L-224ENST00000588712 FGAP02671 866 aa12.58□□□□□ -0.39
NEDD4L-224ENST00000588712 UBE2Q2Q8WVN8 375 aa12.58□□□□□ -0.39
NEDD4L-224ENST00000588712 RIOK1Q9BRS2 568 aaKnown RBP12.58□□□□□ -0.39
NEDD4L-224ENST00000588712 NAPBQ9H115 298 aa12.58□□□□□ -0.39
NEDD4L-224ENST00000588712 ARMT1Q9H993 441 aa12.58□□□□□ -0.39
NEDD4L-224ENST00000588712 ATP8A2Q9NTI2 1148 aa12.58□□□□□ -0.39
NEDD4L-224ENST00000588712 MROH7-TTC4A0A0A0MT08 1334 aa12.58□□□□□ -0.4
NEDD4L-224ENST00000588712 GPR75-ASB3A0A0A6YYF3 556 aa12.58□□□□□ -0.4
NEDD4L-224ENST00000588712 VPS53Q5VIR6 699 aa12.58□□□□□ -0.4
NEDD4L-224ENST00000588712 HHIPL2Q6UWX4 724 aa12.58□□□□□ -0.4
NEDD4L-224ENST00000588712 IFNL3Q8IZI9 196 aa12.58□□□□□ -0.4
NEDD4L-224ENST00000588712 MIGA1Q8NAN2 632 aa12.58□□□□□ -0.4
NEDD4L-224ENST00000588712 FHDC1Q9C0D6 1143 aaPredicted RBP12.58□□□□□ -0.4
NEDD4L-224ENST00000588712 PALD1Q9ULE6 856 aa12.58□□□□□ -0.4
NEDD4L-224ENST00000588712 CYP46A1Q9Y6A2 500 aa12.58□□□□□ -0.4
NEDD4L-224ENST00000588712 NEK4P51957 841 aa12.57□□□□□ -0.4
NEDD4L-224ENST00000588712 DACT2Q5SW24 774 aa12.57□□□□□ -0.4
NEDD4L-224ENST00000588712 LCORLQ8N3X6 602 aa12.57□□□□□ -0.4
NEDD4L-224ENST00000588712 ZNF384Q8TF68 577 aa12.57□□□□□ -0.4
NEDD4L-224ENST00000588712 ZNF277Q9NRM2 450 aaPredicted RBP12.57□□□□□ -0.4
NEDD4L-224ENST00000588712 CHD4Q14839 1912 aa12.57□□□□□ -0.4
NEDD4L-224ENST00000588712 GSG1L2A8MUP6 293 aa12.57□□□□□ -0.4
NEDD4L-224ENST00000588712 CYP21A2P08686 494 aa12.57□□□□□ -0.4
NEDD4L-224ENST00000588712 TDO2P48775 406 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms