RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 GNL3LQ9NVN8 582 aaKnown RBP23.24■■□□□ 1.31
ATG4D-203ENST00000585752 RFX5P48382 616 aaPredicted RBP23.23■■□□□ 1.31
ATG4D-203ENST00000585752 INTS3Q68E01 1043 aaKnown RBP23.23■■□□□ 1.31
ATG4D-203ENST00000585752 CSRNP1Q96S65 589 aa23.23■■□□□ 1.31
ATG4D-203ENST00000585752 PCDHAC2Q9Y5I4 1007 aa23.23■■□□□ 1.31
ATG4D-203ENST00000585752 CIAO1O76071 339 aa23.22■■□□□ 1.31
ATG4D-203ENST00000585752 CRKP46108 304 aa23.22■■□□□ 1.31
ATG4D-203ENST00000585752 RNF186Q9NXI6 227 aa23.22■■□□□ 1.31
ATG4D-203ENST00000585752 MAST3O60307 1309 aa23.22■■□□□ 1.31
ATG4D-203ENST00000585752 IL15P40933 162 aaPredicted RBP23.21■■□□□ 1.31
ATG4D-203ENST00000585752 ATP2B3Q16720 1220 aa23.21■■□□□ 1.31
ATG4D-203ENST00000585752 ITPRIPQ8IWB1 547 aa23.21■■□□□ 1.31
ATG4D-203ENST00000585752 TEKT1Q969V4 418 aa23.21■■□□□ 1.31
ATG4D-203ENST00000585752 MEIS3Q99687 375 aa23.21■■□□□ 1.31
ATG4D-203ENST00000585752 TDRD3Q9H7E2 651 aaKnown RBP23.21■■□□□ 1.31
ATG4D-203ENST00000585752 TMOD2Q9NZR1 351 aa23.21■■□□□ 1.31
ATG4D-203ENST00000585752 TNNQ9UQP3 1299 aa23.21■■□□□ 1.31
ATG4D-203ENST00000585752 IREB2P48200 963 aaKnown RBP23.2■■□□□ 1.3
ATG4D-203ENST00000585752 SREBF2Q12772 1141 aa23.2■■□□□ 1.3
ATG4D-203ENST00000585752 MKRN3Q13064 507 aaKnown RBP23.2■■□□□ 1.3
ATG4D-203ENST00000585752 TMEM57Q8N5G2 664 aa23.2■■□□□ 1.3
ATG4D-203ENST00000585752 WDR66Q8TBY9 1149 aa23.2■■□□□ 1.3
ATG4D-203ENST00000585752 SLC10A4Q96EP9 437 aa23.2■■□□□ 1.3
ATG4D-203ENST00000585752 ZNF70Q9UC06 446 aaPredicted RBP23.2■■□□□ 1.3
ATG4D-203ENST00000585752 FGFR2P21802 821 aa23.19■■□□□ 1.3
ATG4D-203ENST00000585752 HDLBPQ00341 1268 aaKnown RBP23.19■■□□□ 1.3
ATG4D-203ENST00000585752 RASA3Q14644 834 aa23.19■■□□□ 1.3
ATG4D-203ENST00000585752 ATG9AQ7Z3C6 839 aa23.19■■□□□ 1.3
ATG4D-203ENST00000585752 SRGAP3O43295 1099 aa23.18■■□□□ 1.3
ATG4D-203ENST00000585752 SPDYE2Q495Y8 402 aa23.18■■□□□ 1.3
ATG4D-203ENST00000585752 ABHD8Q96I13 439 aa23.18■■□□□ 1.3
ATG4D-203ENST00000585752 SUGT1Q9Y2Z0 365 aa23.18■■□□□ 1.3
ATG4D-203ENST00000585752 AK9Q5TCS8 1911 aa23.18■■□□□ 1.3
ATG4D-203ENST00000585752 TCP10L2B9ZVM9 353 aa23.17■■□□□ 1.3
ATG4D-203ENST00000585752 DGKZQ13574 1117 aa23.17■■□□□ 1.3
ATG4D-203ENST00000585752 COPRSQ9NQ92 184 aa23.17■■□□□ 1.3
ATG4D-203ENST00000585752 GNAI2P04899 355 aa23.16■■□□□ 1.3
ATG4D-203ENST00000585752 NBPF12Q5TAG4 269 aaPredicted RBP23.16■■□□□ 1.3
ATG4D-203ENST00000585752 PA2G4Q9UQ80 394 aaKnown RBP23.16■■□□□ 1.3
ATG4D-203ENST00000585752 UNCXA6NJT0 531 aa23.15■■□□□ 1.3
ATG4D-203ENST00000585752 LDLRAD1Q5T700 205 aa23.15■■□□□ 1.3
ATG4D-203ENST00000585752 FZD1Q9UP38 647 aa23.15■■□□□ 1.3
ATG4D-203ENST00000585752 AKAP2Q9Y2D5 859 aa23.15■■□□□ 1.3
ATG4D-203ENST00000585752 CCDC85CA6NKD9 419 aa23.14■■□□□ 1.29
ATG4D-203ENST00000585752 MAP3K11Q16584 847 aa23.14■■□□□ 1.29
ATG4D-203ENST00000585752 PANK1Q8TE04 598 aa23.14■■□□□ 1.29
ATG4D-203ENST00000585752 MRIQ9BWK5 157 aa23.14■■□□□ 1.29
ATG4D-203ENST00000585752 DENND2AQ9ULE3 1009 aa23.14■■□□□ 1.29
ATG4D-203ENST00000585752 TM4SF4P48230 202 aa23.13■■□□□ 1.29
ATG4D-203ENST00000585752 SPRYD7Q5W111 196 aa23.13■■□□□ 1.29
ATG4D-203ENST00000585752 ANKRD13AQ8IZ07 590 aa23.13■■□□□ 1.29
ATG4D-203ENST00000585752 MANSC4A6NHS7 340 aaPredicted RBP23.12■■□□□ 1.29
ATG4D-203ENST00000585752 SEMA3EO15041 775 aa23.12■■□□□ 1.29
ATG4D-203ENST00000585752 RLBP1P12271 317 aa23.12■■□□□ 1.29
ATG4D-203ENST00000585752 INHBEP58166 350 aa23.12■■□□□ 1.29
ATG4D-203ENST00000585752 G3BP1Q13283 466 aaKnown RBP eCLIP23.12■■□□□ 1.29
ATG4D-203ENST00000585752 GRIK5Q16478 980 aa23.12■■□□□ 1.29
ATG4D-203ENST00000585752 ZGPATQ8N5A5 531 aaKnown RBP23.12■■□□□ 1.29
ATG4D-203ENST00000585752 HOOK2Q96ED9 719 aa23.12■■□□□ 1.29
ATG4D-203ENST00000585752 ZDHHC15Q96MV8 337 aa23.12■■□□□ 1.29
ATG4D-203ENST00000585752 MCOLN1Q9GZU1 580 aa23.12■■□□□ 1.29
ATG4D-203ENST00000585752 CHMP4BQ9H444 224 aaKnown RBP23.12■■□□□ 1.29
ATG4D-203ENST00000585752 AOX1Q06278 1338 aa23.11■■□□□ 1.29
ATG4D-203ENST00000585752 USP2O75604 605 aaPredicted RBP23.11■■□□□ 1.29
ATG4D-203ENST00000585752 ALDH1A1P00352 501 aa23.11■■□□□ 1.29
ATG4D-203ENST00000585752 LDHBP07195 334 aaKnown RBP23.11■■□□□ 1.29
ATG4D-203ENST00000585752 ZBTB48P10074 688 aaPredicted RBP23.11■■□□□ 1.29
ATG4D-203ENST00000585752 HHIPL2Q6UWX4 724 aa23.11■■□□□ 1.29
ATG4D-203ENST00000585752 TBC1D8O95759 1140 aa23.1■■□□□ 1.29
ATG4D-203ENST00000585752 GORABQ5T7V8 394 aa23.1■■□□□ 1.29
ATG4D-203ENST00000585752 OTUD7BQ6GQQ9 843 aa23.1■■□□□ 1.29
ATG4D-203ENST00000585752 NEUROD6Q96NK8 337 aa23.1■■□□□ 1.29
ATG4D-203ENST00000585752 TMEM39BQ9GZU3 492 aa23.1■■□□□ 1.29
ATG4D-203ENST00000585752 TIMM10P62072 90 aa23.09■■□□□ 1.29
ATG4D-203ENST00000585752 PDE3AQ14432 1141 aa23.09■■□□□ 1.29
ATG4D-203ENST00000585752 WNK4Q96J92 1243 aa23.09■■□□□ 1.29
ATG4D-203ENST00000585752 DDX19BQ9UMR2 479 aa23.09■■□□□ 1.29
ATG4D-203ENST00000585752 CSADQ9Y600 493 aa23.09■■□□□ 1.29
ATG4D-203ENST00000585752 MYH2Q9UKX2 1941 aa23.08■■□□□ 1.29
ATG4D-203ENST00000585752 PHKA1P46020 1223 aa23.08■■□□□ 1.29
ATG4D-203ENST00000585752 CACNB3P54284 484 aa23.08■■□□□ 1.29
ATG4D-203ENST00000585752 MTX1Q13505 466 aa23.08■■□□□ 1.29
ATG4D-203ENST00000585752 MVPQ14764 893 aaKnown RBP23.08■■□□□ 1.29
ATG4D-203ENST00000585752 SSC5DA1L4H1 1573 aa23.07■■□□□ 1.28
ATG4D-203ENST00000585752 A0A1B0GUL7 405 aa23.07■■□□□ 1.28
ATG4D-203ENST00000585752 TFCP2Q12800 502 aa23.07■■□□□ 1.28
ATG4D-203ENST00000585752 OS9Q13438 667 aaPredicted RBP23.07■■□□□ 1.28
ATG4D-203ENST00000585752 CCDC102BQ68D86 513 aa23.07■■□□□ 1.28
ATG4D-203ENST00000585752 FAM83AQ86UY5 434 aa23.07■■□□□ 1.28
ATG4D-203ENST00000585752 SLF2Q8IX21 1173 aa23.07■■□□□ 1.28
ATG4D-203ENST00000585752 CLMNQ96JQ2 1002 aa23.07■■□□□ 1.28
ATG4D-203ENST00000585752 ELP3Q9H9T3 547 aa23.07■■□□□ 1.28
ATG4D-203ENST00000585752 COG6Q9Y2V7 657 aa23.07■■□□□ 1.28
ATG4D-203ENST00000585752 ADORA1P30542 326 aa23.06■■□□□ 1.28
ATG4D-203ENST00000585752 RRP1P56182 461 aaKnown RBP23.06■■□□□ 1.28
ATG4D-203ENST00000585752 MAP3K9P80192 1104 aa23.06■■□□□ 1.28
ATG4D-203ENST00000585752 FKBP1CQ5VVH2 108 aa23.06■■□□□ 1.28
ATG4D-203ENST00000585752 DCAF15Q66K64 600 aa23.06■■□□□ 1.28
ATG4D-203ENST00000585752 SPTY2D1Q68D10 685 aaPredicted RBP23.06■■□□□ 1.28
ATG4D-203ENST00000585752 APOBEC3HQ6NTF7 200 aaKnown RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms