RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 SPG7Q9UQ90 795 aa7.82□□□□□ -1.16
SMAD4-203ENST00000585448 FAM229AH3BQW9 127 aa7.81□□□□□ -1.16
SMAD4-203ENST00000585448 LINC01387J3KSC0 135 aa7.81□□□□□ -1.16
SMAD4-203ENST00000585448 IGHA1P01876 353 aa7.81□□□□□ -1.16
SMAD4-203ENST00000585448 ITGB2P05107 769 aa7.81□□□□□ -1.16
SMAD4-203ENST00000585448 GALNT11Q8NCW6 608 aa7.81□□□□□ -1.16
SMAD4-203ENST00000585448 ASAP3Q8TDY4 903 aa7.81□□□□□ -1.16
SMAD4-203ENST00000585448 SECISBP2LQ93073 1101 aaKnown RBP7.81□□□□□ -1.16
SMAD4-203ENST00000585448 SEC31BQ9NQW1 1179 aa7.81□□□□□ -1.16
SMAD4-203ENST00000585448 METTL12A8MUP2 240 aa7.8□□□□□ -1.16
SMAD4-203ENST00000585448 SOX1O00570 391 aaPredicted RBP7.8□□□□□ -1.16
SMAD4-203ENST00000585448 CLGNO14967 610 aa7.8□□□□□ -1.16
SMAD4-203ENST00000585448 B3GALT4O96024 378 aa7.8□□□□□ -1.16
SMAD4-203ENST00000585448 PTMSP20962 102 aa7.8□□□□□ -1.16
SMAD4-203ENST00000585448 GNA15P30679 374 aa7.8□□□□□ -1.16
SMAD4-203ENST00000585448 MFAP1P55081 439 aaKnown RBP7.8□□□□□ -1.16
SMAD4-203ENST00000585448 IKBKEQ14164 716 aa7.8□□□□□ -1.16
SMAD4-203ENST00000585448 ADGRE1Q14246 886 aa7.8□□□□□ -1.16
SMAD4-203ENST00000585448 SUZ12Q15022 739 aaKnown RBP7.8□□□□□ -1.16
SMAD4-203ENST00000585448 GRIK4Q16099 956 aa7.8□□□□□ -1.16
SMAD4-203ENST00000585448 PI16Q6UXB8 463 aa7.8□□□□□ -1.16
SMAD4-203ENST00000585448 CD163Q86VB7 1156 aa7.8□□□□□ -1.16
SMAD4-203ENST00000585448 MRPL18Q9H0U6 180 aaKnown RBP7.8□□□□□ -1.16
SMAD4-203ENST00000585448 WWC3Q9ULE0 1092 aa7.8□□□□□ -1.16
SMAD4-203ENST00000585448 KIF20AO95235 890 aa7.79□□□□□ -1.16
SMAD4-203ENST00000585448 HMGB1P09429 215 aaKnown RBP7.79□□□□□ -1.16
SMAD4-203ENST00000585448 CD68P34810 354 aaPredicted RBP7.79□□□□□ -1.16
SMAD4-203ENST00000585448 CHRNA4P43681 627 aa7.79□□□□□ -1.16
SMAD4-203ENST00000585448 ARL4DP49703 201 aa7.79□□□□□ -1.16
SMAD4-203ENST00000585448 C19orf57Q0VDD7 668 aa7.79□□□□□ -1.16
SMAD4-203ENST00000585448 NFKBIBQ15653 356 aa7.79□□□□□ -1.16
SMAD4-203ENST00000585448 FOXD4L6Q3SYB3 417 aaPredicted RBP7.79□□□□□ -1.16
SMAD4-203ENST00000585448 FOXD4L3Q6VB84 417 aaPredicted RBP7.79□□□□□ -1.16
SMAD4-203ENST00000585448 C3orf58Q8NDZ4 430 aa7.79□□□□□ -1.16
SMAD4-203ENST00000585448 OSBPL7Q9BZF2 842 aa7.79□□□□□ -1.16
SMAD4-203ENST00000585448 C12orf49Q9H741 205 aa7.79□□□□□ -1.16
SMAD4-203ENST00000585448 PPM1HQ9ULR3 514 aa7.79□□□□□ -1.16
SMAD4-203ENST00000585448 LAS1LQ9Y4W2 734 aaKnown RBP7.79□□□□□ -1.16
SMAD4-203ENST00000585448 C1QTNF9BB2RNN3 333 aa7.78□□□□□ -1.16
SMAD4-203ENST00000585448 PTMAP06454 111 aaKnown RBP7.78□□□□□ -1.16
SMAD4-203ENST00000585448 GSTT1P30711 240 aa7.78□□□□□ -1.16
SMAD4-203ENST00000585448 PCDH1Q08174 1060 aa7.78□□□□□ -1.16
SMAD4-203ENST00000585448 SPRED3Q2MJR0 410 aa7.78□□□□□ -1.16
SMAD4-203ENST00000585448 AXDND1Q5T1B0 1012 aaPredicted RBP7.78□□□□□ -1.16
SMAD4-203ENST00000585448 Q6ZS46 218 aa7.78□□□□□ -1.16
SMAD4-203ENST00000585448 TRIM44Q96DX7 344 aaPredicted RBP7.78□□□□□ -1.16
SMAD4-203ENST00000585448 SETDB2Q96T68 719 aa7.78□□□□□ -1.16
SMAD4-203ENST00000585448 NRSN2Q9GZP1 204 aa7.78□□□□□ -1.16
SMAD4-203ENST00000585448 TMEM51Q9NW97 253 aa7.78□□□□□ -1.16
SMAD4-203ENST00000585448 FAM8A1Q9UBU6 413 aa7.78□□□□□ -1.16
SMAD4-203ENST00000585448 DMTNQ08495 405 aa7.77□□□□□ -1.17
SMAD4-203ENST00000585448 MBTPS1Q14703 1052 aa7.77□□□□□ -1.17
SMAD4-203ENST00000585448 ZNF423Q2M1K9 1284 aa7.77□□□□□ -1.17
SMAD4-203ENST00000585448 TXNDC11Q6PKC3 985 aa7.77□□□□□ -1.17
SMAD4-203ENST00000585448 NXPE4Q6UWF7 544 aa7.77□□□□□ -1.17
SMAD4-203ENST00000585448 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.77□□□□□ -1.17
SMAD4-203ENST00000585448 TMC4Q7Z404 712 aa7.77□□□□□ -1.17
SMAD4-203ENST00000585448 KLHDC7BQ96G42 594 aa7.77□□□□□ -1.17
SMAD4-203ENST00000585448 GOLGA6L3A6NEY3 463 aa7.76□□□□□ -1.17
SMAD4-203ENST00000585448 TCERG1O14776 1098 aaKnown RBP7.76□□□□□ -1.17
SMAD4-203ENST00000585448 ANP32CO43423 234 aa7.76□□□□□ -1.17
SMAD4-203ENST00000585448 PROCP04070 461 aa7.76□□□□□ -1.17
SMAD4-203ENST00000585448 IRX3P78415 501 aaPredicted RBP7.76□□□□□ -1.17
SMAD4-203ENST00000585448 DAB2P98082 770 aa7.76□□□□□ -1.17
SMAD4-203ENST00000585448 SHISA2Q6UWI4 295 aa7.76□□□□□ -1.17
SMAD4-203ENST00000585448 DDX54Q8TDD1 881 aaKnown RBP7.76□□□□□ -1.17
SMAD4-203ENST00000585448 GTPBP4Q9BZE4 634 aaKnown RBP7.76□□□□□ -1.17
SMAD4-203ENST00000585448 AK5Q9Y6K8 562 aa7.76□□□□□ -1.17
SMAD4-203ENST00000585448 NCAPD3P42695 1498 aa7.75□□□□□ -1.17
SMAD4-203ENST00000585448 ADAM11O75078 769 aa7.75□□□□□ -1.17
SMAD4-203ENST00000585448 LETM1O95202 739 aaPredicted RBP7.75□□□□□ -1.17
SMAD4-203ENST00000585448 MMP14P50281 582 aa7.75□□□□□ -1.17
SMAD4-203ENST00000585448 FCGRTP55899 365 aa7.75□□□□□ -1.17
SMAD4-203ENST00000585448 DTHD1Q6ZMT9 781 aa7.75□□□□□ -1.17
SMAD4-203ENST00000585448 TXNRD3Q86VQ6 643 aa7.75□□□□□ -1.17
SMAD4-203ENST00000585448 FOXD4L4Q8WXT5 416 aaPredicted RBP7.75□□□□□ -1.17
SMAD4-203ENST00000585448 ZNF622Q969S3 477 aaKnown RBP eCLIP7.75□□□□□ -1.17
SMAD4-203ENST00000585448 DUSP9Q99956 384 aaKnown RBP7.75□□□□□ -1.17
SMAD4-203ENST00000585448 MEGF11A6BM72 1044 aa7.74□□□□□ -1.17
SMAD4-203ENST00000585448 F8W735 103 aaPredicted RBP7.74□□□□□ -1.17
SMAD4-203ENST00000585448 RGS22Q8NE09 1264 aa7.74□□□□□ -1.17
SMAD4-203ENST00000585448 ZNF830Q96NB3 372 aaPredicted RBP7.74□□□□□ -1.17
SMAD4-203ENST00000585448 CARD10Q9BWT7 1032 aa7.74□□□□□ -1.17
SMAD4-203ENST00000585448 PARP2Q9UGN5 583 aa7.74□□□□□ -1.17
SMAD4-203ENST00000585448 EIF4BP23588 611 aaKnown RBP7.73□□□□□ -1.17
SMAD4-203ENST00000585448 SLC20A2Q08357 652 aa7.73□□□□□ -1.17
SMAD4-203ENST00000585448 FAAP100Q0VG06 881 aa7.73□□□□□ -1.17
SMAD4-203ENST00000585448 AP3B2Q13367 1082 aa7.73□□□□□ -1.17
SMAD4-203ENST00000585448 SLC7A3Q8WY07 619 aa7.73□□□□□ -1.17
SMAD4-203ENST00000585448 SPOCK3Q9BQ16 436 aa7.73□□□□□ -1.17
SMAD4-203ENST00000585448 SSBP4Q9BWG4 385 aaPredicted RBP7.73□□□□□ -1.17
SMAD4-203ENST00000585448 AKTIPQ9H8T0 292 aa7.73□□□□□ -1.17
SMAD4-203ENST00000585448 KCNK4Q9NYG8 393 aa7.73□□□□□ -1.17
SMAD4-203ENST00000585448 USP21Q9UK80 565 aa7.73□□□□□ -1.17
SMAD4-203ENST00000585448 MSTNO14793 375 aa7.72□□□□□ -1.17
SMAD4-203ENST00000585448 CYP11A1P05108 521 aa7.72□□□□□ -1.17
SMAD4-203ENST00000585448 CDC25BP30305 580 aa7.72□□□□□ -1.17
SMAD4-203ENST00000585448 GATA4P43694 442 aa7.72□□□□□ -1.17
SMAD4-203ENST00000585448 HP1BP3Q5SSJ5 553 aaPredicted RBP7.72□□□□□ -1.17
SMAD4-203ENST00000585448 HGSNATQ68CP4 663 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms