RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 SP3Q02447 781 aa22.49■■□□□ 1.19
MKS1-209ENST00000580127 OTOP1Q7RTM1 612 aa22.49■■□□□ 1.19
MKS1-209ENST00000580127 FBXO33Q7Z6M2 555 aa22.49■■□□□ 1.19
MKS1-209ENST00000580127 OPTNQ96CV9 577 aa22.49■■□□□ 1.19
MKS1-209ENST00000580127 MRIQ9BWK5 157 aa22.49■■□□□ 1.19
MKS1-209ENST00000580127 PUS3Q9BZE2 481 aaKnown RBP22.49■■□□□ 1.19
MKS1-209ENST00000580127 ELP3Q9H9T3 547 aa22.49■■□□□ 1.19
MKS1-209ENST00000580127 EFCC1Q9HA90 598 aa22.49■■□□□ 1.19
MKS1-209ENST00000580127 A0A1B0GUL6 1792 aa22.48■■□□□ 1.19
MKS1-209ENST00000580127 TESPA1A2RU30 521 aaPredicted RBP22.48■■□□□ 1.19
MKS1-209ENST00000580127 TCP10L2B9ZVM9 353 aa22.48■■□□□ 1.19
MKS1-209ENST00000580127 GTF2A2P52657 109 aa22.48■■□□□ 1.19
MKS1-209ENST00000580127 CRHR2Q13324 411 aa22.48■■□□□ 1.19
MKS1-209ENST00000580127 TEKT1Q969V4 418 aa22.48■■□□□ 1.19
MKS1-209ENST00000580127 UTYO14607 1347 aa22.48■■□□□ 1.19
MKS1-209ENST00000580127 PDE8BO95263 885 aa22.47■■□□□ 1.19
MKS1-209ENST00000580127 CHAF1AQ13111 956 aaPredicted RBP22.47■■□□□ 1.19
MKS1-209ENST00000580127 BICC1Q9H694 974 aaKnown RBP22.47■■□□□ 1.19
MKS1-209ENST00000580127 PTPN22Q9Y2R2 807 aa22.47■■□□□ 1.19
MKS1-209ENST00000580127 SSC5DA1L4H1 1573 aa22.46■■□□□ 1.19
MKS1-209ENST00000580127 IFIT1P09914 478 aaKnown RBP22.46■■□□□ 1.19
MKS1-209ENST00000580127 RABL6Q3YEC7 729 aaPredicted RBP22.46■■□□□ 1.19
MKS1-209ENST00000580127 GCC1Q96CN9 775 aa22.46■■□□□ 1.19
MKS1-209ENST00000580127 ZFYVE28Q9HCC9 887 aa22.46■■□□□ 1.19
MKS1-209ENST00000580127 SUGT1Q9Y2Z0 365 aa22.46■■□□□ 1.19
MKS1-209ENST00000580127 MAST3O60307 1309 aa22.46■■□□□ 1.19
MKS1-209ENST00000580127 PTPRCP08575 1304 aa22.46■■□□□ 1.19
MKS1-209ENST00000580127 KAZALD1Q96I82 304 aa22.45■■□□□ 1.18
MKS1-209ENST00000580127 NBPF11Q86T75 865 aa22.44■■□□□ 1.18
MKS1-209ENST00000580127 CD99L2Q8TCZ2 262 aa22.44■■□□□ 1.18
MKS1-209ENST00000580127 TEPSINQ96N21 525 aa22.44■■□□□ 1.18
MKS1-209ENST00000580127 TMEM39BQ9GZU3 492 aa22.44■■□□□ 1.18
MKS1-209ENST00000580127 IQSEC3Q9UPP2 1182 aaPredicted RBP22.44■■□□□ 1.18
MKS1-209ENST00000580127 AOX1Q06278 1338 aa22.43■■□□□ 1.18
MKS1-209ENST00000580127 CCL15-CCL14A0A0B4J2E2 113 aa22.43■■□□□ 1.18
MKS1-209ENST00000580127 GJA5P36382 358 aa22.43■■□□□ 1.18
MKS1-209ENST00000580127 TAF1CQ15572 869 aaPredicted RBP22.43■■□□□ 1.18
MKS1-209ENST00000580127 CCL15Q16663 113 aa22.43■■□□□ 1.18
MKS1-209ENST00000580127 FKBP1CQ5VVH2 108 aa22.43■■□□□ 1.18
MKS1-209ENST00000580127 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.43■■□□□ 1.18
MKS1-209ENST00000580127 PTPN18Q99952 460 aa22.43■■□□□ 1.18
MKS1-209ENST00000580127 TMEM106CQ9BVX2 250 aa22.43■■□□□ 1.18
MKS1-209ENST00000580127 CETPP11597 493 aa22.42■■□□□ 1.18
MKS1-209ENST00000580127 VGLL4Q14135 290 aa22.42■■□□□ 1.18
MKS1-209ENST00000580127 KIF22Q14807 665 aa22.42■■□□□ 1.18
MKS1-209ENST00000580127 LRRC24Q50LG9 513 aa22.42■■□□□ 1.18
MKS1-209ENST00000580127 DCAF15Q66K64 600 aa22.42■■□□□ 1.18
MKS1-209ENST00000580127 FAM83AQ86UY5 434 aa22.42■■□□□ 1.18
MKS1-209ENST00000580127 MRPL50Q8N5N7 158 aaKnown RBP22.42■■□□□ 1.18
MKS1-209ENST00000580127 MS4A4AQ96JQ5 239 aa22.42■■□□□ 1.18
MKS1-209ENST00000580127 ZDHHC15Q96MV8 337 aa22.42■■□□□ 1.18
MKS1-209ENST00000580127 LAMB1P07942 1786 aa22.41■■□□□ 1.18
MKS1-209ENST00000580127 PUM3Q15397 648 aaKnown RBP22.41■■□□□ 1.18
MKS1-209ENST00000580127 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.41■■□□□ 1.18
MKS1-209ENST00000580127 HDAC5Q9UQL6 1122 aa22.41■■□□□ 1.18
MKS1-209ENST00000580127 KIF16BQ96L93 1317 aa22.4■■□□□ 1.18
MKS1-209ENST00000580127 E9PSI1 815 aa22.4■■□□□ 1.18
MKS1-209ENST00000580127 BCAMP50895 628 aa22.4■■□□□ 1.18
MKS1-209ENST00000580127 HHIPL2Q6UWX4 724 aa22.4■■□□□ 1.18
MKS1-209ENST00000580127 ERO1BQ86YB8 467 aa22.4■■□□□ 1.18
MKS1-209ENST00000580127 ANKRD44Q8N8A2 993 aa22.4■■□□□ 1.18
MKS1-209ENST00000580127 WDR66Q8TBY9 1149 aa22.4■■□□□ 1.18
MKS1-209ENST00000580127 OTUD5Q96G74 571 aa22.4■■□□□ 1.18
MKS1-209ENST00000580127 SLC5A1P13866 664 aa22.39■■□□□ 1.17
MKS1-209ENST00000580127 BRI3BPQ8WY22 251 aa22.39■■□□□ 1.17
MKS1-209ENST00000580127 ARMC5Q96C12 935 aa22.39■■□□□ 1.17
MKS1-209ENST00000580127 ZCCHC17Q9NP64 241 aaKnown RBP22.39■■□□□ 1.17
MKS1-209ENST00000580127 SNAPC2Q13487 334 aa22.38■■□□□ 1.17
MKS1-209ENST00000580127 USP44Q9H0E7 712 aa22.38■■□□□ 1.17
MKS1-209ENST00000580127 GNL3LQ9NVN8 582 aaKnown RBP22.38■■□□□ 1.17
MKS1-209ENST00000580127 SPDYE5A6NIY4 337 aa22.37■■□□□ 1.17
MKS1-209ENST00000580127 VGLL2Q8N8G2 317 aa22.37■■□□□ 1.17
MKS1-209ENST00000580127 LPIN2Q92539 896 aa22.37■■□□□ 1.17
MKS1-209ENST00000580127 WRNIP1Q96S55 665 aa22.37■■□□□ 1.17
MKS1-209ENST00000580127 KIAA0100Q14667 2235 aaKnown RBP22.37■■□□□ 1.17
MKS1-209ENST00000580127 EYA2O00167 538 aa22.36■■□□□ 1.17
MKS1-209ENST00000580127 GNRH1P01148 92 aa22.36■■□□□ 1.17
MKS1-209ENST00000580127 GRIK5Q16478 980 aa22.36■■□□□ 1.17
MKS1-209ENST00000580127 SLC9C1Q4G0N8 1177 aa22.36■■□□□ 1.17
MKS1-209ENST00000580127 ZNF341Q9BYN7 854 aa22.36■■□□□ 1.17
MKS1-209ENST00000580127 ARAP2Q8WZ64 1704 aa22.36■■□□□ 1.17
MKS1-209ENST00000580127 ZNF521Q96K83 1311 aa22.35■■□□□ 1.17
MKS1-209ENST00000580127 CACNB3P54284 484 aa22.35■■□□□ 1.17
MKS1-209ENST00000580127 APOBEC3HQ6NTF7 200 aaKnown RBP22.35■■□□□ 1.17
MKS1-209ENST00000580127 CNKSR2Q8WXI2 1034 aa22.35■■□□□ 1.17
MKS1-209ENST00000580127 SSH1Q8WYL5 1049 aa22.35■■□□□ 1.17
MKS1-209ENST00000580127 FBXO3Q9UK99 471 aa22.35■■□□□ 1.17
MKS1-209ENST00000580127 POTEFA5A3E0 1075 aa22.34■■□□□ 1.17
MKS1-209ENST00000580127 TLR2O60603 784 aa22.34■■□□□ 1.17
MKS1-209ENST00000580127 PPATQ06203 517 aa22.34■■□□□ 1.17
MKS1-209ENST00000580127 PPIL2Q13356 520 aa22.34■■□□□ 1.17
MKS1-209ENST00000580127 ALDH1L2Q3SY69 923 aa22.34■■□□□ 1.17
MKS1-209ENST00000580127 CDAN1Q8IWY9 1227 aa22.34■■□□□ 1.17
MKS1-209ENST00000580127 KLHDC4Q8TBB5 520 aa22.34■■□□□ 1.17
MKS1-209ENST00000580127 CEP126Q9P2H0 1117 aa22.34■■□□□ 1.17
MKS1-209ENST00000580127 OTOFQ9HC10 1997 aa22.33■■□□□ 1.17
MKS1-209ENST00000580127 FGFR2P21802 821 aa22.33■■□□□ 1.17
MKS1-209ENST00000580127 PRMT2P55345 433 aa22.33■■□□□ 1.17
MKS1-209ENST00000580127 SLC4A8Q2Y0W8 1093 aa22.33■■□□□ 1.17
MKS1-209ENST00000580127 FAM43AQ8N2R8 423 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms