RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 TFRCP02786 760 aaKnown RBP16.97■□□□□ 0.31
CDK5RAP3-213ENST00000579605 IGKV5-2P06315 115 aa16.97■□□□□ 0.31
CDK5RAP3-213ENST00000579605 SPDYE2Q495Y8 402 aa16.97■□□□□ 0.31
CDK5RAP3-213ENST00000579605 C17orf99Q6UX52 265 aa16.97■□□□□ 0.31
CDK5RAP3-213ENST00000579605 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.97■□□□□ 0.31
CDK5RAP3-213ENST00000579605 TEPSINQ96N21 525 aa16.97■□□□□ 0.31
CDK5RAP3-213ENST00000579605 UNC93B1Q9H1C4 597 aa16.97■□□□□ 0.31
CDK5RAP3-213ENST00000579605 MBIPQ9NS73 344 aa16.97■□□□□ 0.31
CDK5RAP3-213ENST00000579605 MYPNQ86TC9 1320 aa16.96■□□□□ 0.31
CDK5RAP3-213ENST00000579605 SPDYE5A6NIY4 337 aa16.96■□□□□ 0.31
CDK5RAP3-213ENST00000579605 IRF6O14896 467 aa16.96■□□□□ 0.31
CDK5RAP3-213ENST00000579605 SNAPC2Q13487 334 aa16.96■□□□□ 0.31
CDK5RAP3-213ENST00000579605 CWF19L2Q2TBE0 894 aaKnown RBP16.96■□□□□ 0.31
CDK5RAP3-213ENST00000579605 ZKSCAN4Q969J2 545 aaPredicted RBP16.96■□□□□ 0.31
CDK5RAP3-213ENST00000579605 STXBP5LQ9Y2K9 1186 aa16.96■□□□□ 0.31
CDK5RAP3-213ENST00000579605 SGPL1O95470 568 aa16.95■□□□□ 0.3
CDK5RAP3-213ENST00000579605 UBE3BQ7Z3V4 1068 aa16.95■□□□□ 0.3
CDK5RAP3-213ENST00000579605 ZNF804AQ7Z570 1209 aa16.95■□□□□ 0.3
CDK5RAP3-213ENST00000579605 SNCAIPQ9Y6H5 919 aa16.95■□□□□ 0.3
CDK5RAP3-213ENST00000579605 PRKCZQ05513 592 aa16.94■□□□□ 0.3
CDK5RAP3-213ENST00000579605 ERO1BQ86YB8 467 aa16.94■□□□□ 0.3
CDK5RAP3-213ENST00000579605 WRNIP1Q96S55 665 aa16.94■□□□□ 0.3
CDK5RAP3-213ENST00000579605 ZCCHC17Q9NP64 241 aaKnown RBP16.94■□□□□ 0.3
CDK5RAP3-213ENST00000579605 TTF2Q9UNY4 1162 aaKnown RBP16.94■□□□□ 0.3
CDK5RAP3-213ENST00000579605 LAMB1P07942 1786 aa16.94■□□□□ 0.3
CDK5RAP3-213ENST00000579605 LAMA3Q16787 3333 aa16.94■□□□□ 0.3
CDK5RAP3-213ENST00000579605 PI4KAP2A4QPH2 592 aa16.93■□□□□ 0.3
CDK5RAP3-213ENST00000579605 PLIN1O60240 522 aa16.93■□□□□ 0.3
CDK5RAP3-213ENST00000579605 IL1R1P14778 569 aa16.93■□□□□ 0.3
CDK5RAP3-213ENST00000579605 TNNI2P48788 182 aa16.93■□□□□ 0.3
CDK5RAP3-213ENST00000579605 FKBP1AP62942 108 aaKnown RBP16.93■□□□□ 0.3
CDK5RAP3-213ENST00000579605 NEXNQ0ZGT2 675 aa16.93■□□□□ 0.3
CDK5RAP3-213ENST00000579605 DZIP1LQ8IYY4 767 aaKnown RBP16.93■□□□□ 0.3
CDK5RAP3-213ENST00000579605 PI4KAP1Q8N8J0 262 aa16.93■□□□□ 0.3
CDK5RAP3-213ENST00000579605 MTMR10Q9NXD2 777 aa16.93■□□□□ 0.3
CDK5RAP3-213ENST00000579605 ZMYND8Q9ULU4 1186 aaPredicted RBP16.93■□□□□ 0.3
CDK5RAP3-213ENST00000579605 IRS2Q9Y4H2 1338 aa16.93■□□□□ 0.3
CDK5RAP3-213ENST00000579605 SPEF2Q9C093 1822 aa16.92■□□□□ 0.3
CDK5RAP3-213ENST00000579605 PDHXO00330 501 aa16.92■□□□□ 0.3
CDK5RAP3-213ENST00000579605 CACNB3P54284 484 aa16.92■□□□□ 0.3
CDK5RAP3-213ENST00000579605 KSR2Q6VAB6 950 aa16.92■□□□□ 0.3
CDK5RAP3-213ENST00000579605 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.92■□□□□ 0.3
CDK5RAP3-213ENST00000579605 GABRQQ9UN88 632 aa16.92■□□□□ 0.3
CDK5RAP3-213ENST00000579605 H7C1W4 665 aa16.91■□□□□ 0.3
CDK5RAP3-213ENST00000579605 PPIL2Q13356 520 aa16.91■□□□□ 0.3
CDK5RAP3-213ENST00000579605 GPR153Q6NV75 609 aa16.91■□□□□ 0.3
CDK5RAP3-213ENST00000579605 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.91■□□□□ 0.3
CDK5RAP3-213ENST00000579605 C7orf61Q8IZ16 206 aa16.91■□□□□ 0.3
CDK5RAP3-213ENST00000579605 PAWRQ96IZ0 340 aaKnown RBP16.91■□□□□ 0.3
CDK5RAP3-213ENST00000579605 DEFB118Q96PH6 123 aa16.91■□□□□ 0.3
CDK5RAP3-213ENST00000579605 GDF15Q99988 308 aa16.91■□□□□ 0.3
CDK5RAP3-213ENST00000579605 SERPINA10Q9UK55 444 aa16.91■□□□□ 0.3
CDK5RAP3-213ENST00000579605 OTOFQ9HC10 1997 aa16.9■□□□□ 0.3
CDK5RAP3-213ENST00000579605 NEURL1BA8MQ27 555 aa16.9■□□□□ 0.3
CDK5RAP3-213ENST00000579605 ADCY3O60266 1144 aa16.9■□□□□ 0.3
CDK5RAP3-213ENST00000579605 ELNP15502 786 aa16.9■□□□□ 0.3
CDK5RAP3-213ENST00000579605 BCAMP50895 628 aa16.9■□□□□ 0.3
CDK5RAP3-213ENST00000579605 MFSD14BQ5SR56 506 aa16.9■□□□□ 0.3
CDK5RAP3-213ENST00000579605 C15orf52Q6ZUT6 534 aaKnown RBP16.9■□□□□ 0.3
CDK5RAP3-213ENST00000579605 SLAIN1Q8ND83 568 aa16.9■□□□□ 0.3
CDK5RAP3-213ENST00000579605 ANKRD18BA2A2Z9 1011 aa16.89■□□□□ 0.29
CDK5RAP3-213ENST00000579605 SYN1P17600 705 aa16.89■□□□□ 0.29
CDK5RAP3-213ENST00000579605 BMP8BP34820 402 aa16.89■□□□□ 0.29
CDK5RAP3-213ENST00000579605 CRKP46108 304 aa16.89■□□□□ 0.29
CDK5RAP3-213ENST00000579605 FCGRTP55899 365 aa16.89■□□□□ 0.29
CDK5RAP3-213ENST00000579605 CCDC30Q5VVM6 783 aa16.89■□□□□ 0.29
CDK5RAP3-213ENST00000579605 ANKRD23Q86SG2 305 aa16.89■□□□□ 0.29
CDK5RAP3-213ENST00000579605 C8orf58Q8NAV2 365 aa16.89■□□□□ 0.29
CDK5RAP3-213ENST00000579605 RUNDC1Q96C34 613 aa16.89■□□□□ 0.29
CDK5RAP3-213ENST00000579605 TAOK2Q9UL54 1235 aa16.89■□□□□ 0.29
CDK5RAP3-213ENST00000579605 INHAP05111 366 aa16.88■□□□□ 0.29
CDK5RAP3-213ENST00000579605 CSF1RP07333 972 aa16.88■□□□□ 0.29
CDK5RAP3-213ENST00000579605 DIS3LQ8TF46 1054 aaKnown RBP16.88■□□□□ 0.29
CDK5RAP3-213ENST00000579605 CHMP3Q9Y3E7 222 aa16.88■□□□□ 0.29
CDK5RAP3-213ENST00000579605 MIGA2Q7L4E1 593 aa16.87■□□□□ 0.29
CDK5RAP3-213ENST00000579605 NECAB2Q7Z6G3 386 aa16.87■□□□□ 0.29
CDK5RAP3-213ENST00000579605 CYP2C8P10632 490 aa16.86■□□□□ 0.29
CDK5RAP3-213ENST00000579605 FLT3LGP49771 235 aa16.86■□□□□ 0.29
CDK5RAP3-213ENST00000579605 PPATQ06203 517 aa16.86■□□□□ 0.29
CDK5RAP3-213ENST00000579605 LRIT3Q3SXY7 679 aa16.86■□□□□ 0.29
CDK5RAP3-213ENST00000579605 PLA2G12BQ9BX93 195 aa16.86■□□□□ 0.29
CDK5RAP3-213ENST00000579605 FAM205AQ6ZU69 1335 aa16.86■□□□□ 0.29
CDK5RAP3-213ENST00000579605 UNC80Q8N2C7 3258 aa16.85■□□□□ 0.29
CDK5RAP3-213ENST00000579605 ECM29Q5VYK3 1845 aa16.85■□□□□ 0.29
CDK5RAP3-213ENST00000579605 ZNF853P0CG23 659 aa16.85■□□□□ 0.29
CDK5RAP3-213ENST00000579605 INPP5BP32019 993 aa16.85■□□□□ 0.29
CDK5RAP3-213ENST00000579605 MAGEA10P43363 369 aaPredicted RBP16.85■□□□□ 0.29
CDK5RAP3-213ENST00000579605 GYG1P46976 350 aa16.85■□□□□ 0.29
CDK5RAP3-213ENST00000579605 IFIT5Q13325 482 aaKnown RBP16.85■□□□□ 0.29
CDK5RAP3-213ENST00000579605 GCKRQ14397 625 aa16.85■□□□□ 0.29
CDK5RAP3-213ENST00000579605 GRIK5Q16478 980 aa16.85■□□□□ 0.29
CDK5RAP3-213ENST00000579605 ADGRA2Q96PE1 1338 aa16.85■□□□□ 0.29
CDK5RAP3-213ENST00000579605 TDHQ8IZJ6 230 aa16.84■□□□□ 0.29
CDK5RAP3-213ENST00000579605 TDRD7Q8NHU6 1098 aaKnown RBP16.84■□□□□ 0.29
CDK5RAP3-213ENST00000579605 ZNF594Q96JF6 807 aaPredicted RBP16.84■□□□□ 0.29
CDK5RAP3-213ENST00000579605 UBE2OQ9C0C9 1292 aaKnown RBP16.84■□□□□ 0.29
CDK5RAP3-213ENST00000579605 BCRP11274 1271 aa16.83■□□□□ 0.28
CDK5RAP3-213ENST00000579605 HIBADHP31937 336 aaKnown RBP16.83■□□□□ 0.28
CDK5RAP3-213ENST00000579605 CASP7P55210 303 aa16.83■□□□□ 0.28
CDK5RAP3-213ENST00000579605 GNAI1P63096 354 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms