RNA–Protein interactions for RNA: ENST00000578681.5

DDX42-208, Transcript of DEAD-box helicase 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX42, Length 4,337 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-208ENST00000578681 SDR42E1Q8WUS8 393 aa19.3■□□□□ 0.68
DDX42-208ENST00000578681 AK7Q96M32 723 aa19.3■□□□□ 0.68
DDX42-208ENST00000578681 RGPD2P0DJD1 1756 aa19.3■□□□□ 0.68
DDX42-208ENST00000578681 PDIA3P30101 505 aaKnown RBP19.29■□□□□ 0.68
DDX42-208ENST00000578681 AMOTL1Q8IY63 956 aa19.29■□□□□ 0.68
DDX42-208ENST00000578681 CCNL1Q9UK58 526 aaPredicted RBP19.29■□□□□ 0.68
DDX42-208ENST00000578681 PRKAB2O43741 272 aa19.29■□□□□ 0.68
DDX42-208ENST00000578681 CASP7P55210 303 aa19.29■□□□□ 0.68
DDX42-208ENST00000578681 UQCRHLA0A096LP55 91 aa19.29■□□□□ 0.68
DDX42-208ENST00000578681 NRDCO43847 1150 aa19.29■□□□□ 0.68
DDX42-208ENST00000578681 UQCRHP07919 91 aa19.29■□□□□ 0.68
DDX42-208ENST00000578681 NAA16Q6N069 864 aaPredicted RBP19.29■□□□□ 0.68
DDX42-208ENST00000578681 hCG_1642624A0A1W2PR95 340 aa19.29■□□□□ 0.68
DDX42-208ENST00000578681 WTAPQ15007 396 aa19.29■□□□□ 0.68
DDX42-208ENST00000578681 PARP10Q53GL7 1025 aa19.29■□□□□ 0.68
DDX42-208ENST00000578681 PDILTQ8N807 584 aa19.29■□□□□ 0.68
DDX42-208ENST00000578681 IRX3P78415 501 aaPredicted RBP19.28■□□□□ 0.68
DDX42-208ENST00000578681 CHRNDQ07001 517 aa19.28■□□□□ 0.68
DDX42-208ENST00000578681 NKX1-1Q15270 411 aaPredicted RBP19.28■□□□□ 0.68
DDX42-208ENST00000578681 RTCBQ9Y3I0 505 aaKnown RBP19.28■□□□□ 0.68
DDX42-208ENST00000578681 SSRP1Q08945 709 aaKnown RBP19.28■□□□□ 0.68
DDX42-208ENST00000578681 USPL1Q5W0Q7 1092 aa19.28■□□□□ 0.68
DDX42-208ENST00000578681 CLEC17AQ6ZS10 378 aa19.28■□□□□ 0.68
DDX42-208ENST00000578681 CDCA7Q9BWT1 371 aaPredicted RBP19.28■□□□□ 0.68
DDX42-208ENST00000578681 SRP68Q9UHB9 627 aaKnown RBP19.28■□□□□ 0.68
DDX42-208ENST00000578681 NR1I2O75469 434 aa19.28■□□□□ 0.68
DDX42-208ENST00000578681 USP28Q96RU2 1077 aa19.28■□□□□ 0.68
DDX42-208ENST00000578681 IGSF3O75054 1194 aa19.27■□□□□ 0.68
DDX42-208ENST00000578681 USP5P45974 858 aa19.27■□□□□ 0.68
DDX42-208ENST00000578681 RPAP1Q9BWH6 1393 aaPredicted RBP19.27■□□□□ 0.68
DDX42-208ENST00000578681 VIRMAQ69YN4 1812 aaKnown RBP19.27■□□□□ 0.68
DDX42-208ENST00000578681 RGPD1P0DJD0 1748 aa19.27■□□□□ 0.68
DDX42-208ENST00000578681 LRP10Q7Z4F1 713 aa19.27■□□□□ 0.68
DDX42-208ENST00000578681 C17orf53Q8N3J3 647 aaPredicted RBP19.27■□□□□ 0.68
DDX42-208ENST00000578681 ANGEL1Q9UNK9 670 aaKnown RBP19.27■□□□□ 0.68
DDX42-208ENST00000578681 PFKFB2O60825 505 aa19.27■□□□□ 0.67
DDX42-208ENST00000578681 ERFEQ4G0M1 354 aa19.27■□□□□ 0.67
DDX42-208ENST00000578681 NSUN7Q8NE18 718 aaKnown RBP19.27■□□□□ 0.67
DDX42-208ENST00000578681 ZNF219Q9P2Y4 722 aaPredicted RBP19.27■□□□□ 0.67
DDX42-208ENST00000578681 CAMTA1Q9Y6Y1 1673 aa19.26■□□□□ 0.67
DDX42-208ENST00000578681 MAGEB6P1A0A0J9YX57 407 aa19.26■□□□□ 0.67
DDX42-208ENST00000578681 BRD2P25440 801 aaKnown RBP19.26■□□□□ 0.67
DDX42-208ENST00000578681 RASGRF1Q13972 1273 aa19.26■□□□□ 0.67
DDX42-208ENST00000578681 TPTE2Q6XPS3 522 aa19.26■□□□□ 0.67
DDX42-208ENST00000578681 MTERF4Q7Z6M4 381 aaKnown RBP19.26■□□□□ 0.67
DDX42-208ENST00000578681 MARCH10Q8NA82 808 aaPredicted RBP19.26■□□□□ 0.67
DDX42-208ENST00000578681 MROH5Q6ZUA9 1318 aa19.26■□□□□ 0.67
DDX42-208ENST00000578681 XBP1P17861 261 aa19.26■□□□□ 0.67
DDX42-208ENST00000578681 COL5A2P05997 1499 aaPredicted RBP19.25■□□□□ 0.67
DDX42-208ENST00000578681 PES1O00541 588 aaKnown RBP19.25■□□□□ 0.67
DDX42-208ENST00000578681 PPP4R3BQ5MIZ7 849 aa19.25■□□□□ 0.67
DDX42-208ENST00000578681 ZFP91Q96JP5 570 aaPredicted RBP19.25■□□□□ 0.67
DDX42-208ENST00000578681 AIFM3Q96NN9 605 aa19.25■□□□□ 0.67
DDX42-208ENST00000578681 SLC4A9Q96Q91 983 aa19.25■□□□□ 0.67
DDX42-208ENST00000578681 USP21Q9UK80 565 aa19.25■□□□□ 0.67
DDX42-208ENST00000578681 HSP90AA4PQ58FG1 418 aa19.25■□□□□ 0.67
DDX42-208ENST00000578681 CERS3Q8IU89 383 aa19.25■□□□□ 0.67
DDX42-208ENST00000578681 NAT10Q9H0A0 1025 aaKnown RBP19.25■□□□□ 0.67
DDX42-208ENST00000578681 JMYQ8N9B5 988 aa19.25■□□□□ 0.67
DDX42-208ENST00000578681 RIPOR2Q9Y4F9 1068 aa19.25■□□□□ 0.67
DDX42-208ENST00000578681 C6orf229H3BNL8 230 aa19.24■□□□□ 0.67
DDX42-208ENST00000578681 DCCP43146 1447 aa19.24■□□□□ 0.67
DDX42-208ENST00000578681 ATP2B2Q01814 1243 aa19.24■□□□□ 0.67
DDX42-208ENST00000578681 MED23Q9ULK4 1368 aa19.24■□□□□ 0.67
DDX42-208ENST00000578681 ADD2P35612 726 aa19.24■□□□□ 0.67
DDX42-208ENST00000578681 IQCA1Q86XH1 822 aa19.24■□□□□ 0.67
DDX42-208ENST00000578681 CEP57L1Q8IYX8 460 aa19.24■□□□□ 0.67
DDX42-208ENST00000578681 IFNL3Q8IZI9 196 aa19.24■□□□□ 0.67
DDX42-208ENST00000578681 PALLDQ8WX93 1383 aa19.24■□□□□ 0.67
DDX42-208ENST00000578681 FAM200AQ8TCP9 573 aa19.24■□□□□ 0.67
DDX42-208ENST00000578681 RPGRQ92834 1020 aaKnown RBP19.24■□□□□ 0.67
DDX42-208ENST00000578681 DENND2AQ9ULE3 1009 aa19.24■□□□□ 0.67
DDX42-208ENST00000578681 RTN1Q16799 776 aa19.23■□□□□ 0.67
DDX42-208ENST00000578681 RNF41Q9H4P4 317 aaPredicted RBP19.23■□□□□ 0.67
DDX42-208ENST00000578681 MKNK2Q9HBH9 465 aa19.23■□□□□ 0.67
DDX42-208ENST00000578681 MED1Q15648 1581 aaPredicted RBP19.23■□□□□ 0.67
DDX42-208ENST00000578681 SLC3A2P08195 630 aaKnown RBP19.23■□□□□ 0.67
DDX42-208ENST00000578681 TRIM28Q13263 835 aaKnown RBP19.23■□□□□ 0.67
DDX42-208ENST00000578681 SPECC1Q5M775 1068 aa19.23■□□□□ 0.67
DDX42-208ENST00000578681 SPTLC2O15270 562 aa19.23■□□□□ 0.67
DDX42-208ENST00000578681 SAMD1Q6SPF0 538 aaPredicted RBP19.23■□□□□ 0.67
DDX42-208ENST00000578681 AATFQ9NY61 560 aaKnown RBP eCLIP19.23■□□□□ 0.67
DDX42-208ENST00000578681 TSPY2A6NKD2 308 aa19.22■□□□□ 0.67
DDX42-208ENST00000578681 ITPK1Q13572 414 aa19.22■□□□□ 0.67
DDX42-208ENST00000578681 TRERF1Q96PN7 1200 aa19.22■□□□□ 0.67
DDX42-208ENST00000578681 LLPHQ9BRT6 129 aaKnown RBP19.22■□□□□ 0.67
DDX42-208ENST00000578681 FBXO3Q9UK99 471 aa19.22■□□□□ 0.67
DDX42-208ENST00000578681 MRPS27Q92552 414 aaKnown RBP19.22■□□□□ 0.67
DDX42-208ENST00000578681 ERVV-1B6SEH8 477 aa19.21■□□□□ 0.67
DDX42-208ENST00000578681 F8W031 263 aaPredicted RBP19.21■□□□□ 0.67
DDX42-208ENST00000578681 TPD52L1Q16890 204 aaPredicted RBP19.21■□□□□ 0.67
DDX42-208ENST00000578681 CCDC34Q96HJ3 373 aa19.21■□□□□ 0.67
DDX42-208ENST00000578681 KRT23Q9C075 422 aa19.21■□□□□ 0.67
DDX42-208ENST00000578681 ZKSCAN5Q9Y2L8 839 aa19.21■□□□□ 0.67
DDX42-208ENST00000578681 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.21■□□□□ 0.67
DDX42-208ENST00000578681 SLIT3O75094 1523 aa19.21■□□□□ 0.67
DDX42-208ENST00000578681 KCNJ14Q9UNX9 436 aa19.21■□□□□ 0.67
DDX42-208ENST00000578681 ST3GAL1Q11201 340 aa19.21■□□□□ 0.67
DDX42-208ENST00000578681 BRMS1Q9HCU9 246 aa19.21■□□□□ 0.67
DDX42-208ENST00000578681 UBN2Q6ZU65 1347 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms