RNA–Protein interactions for RNA: ENST00000576932.5

TOM1L1-223, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best)

Gene TOM1L1, Length 1,252 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-223ENST00000576932 FECHP22830 423 aa12.06□□□□□ -0.48
TOM1L1-223ENST00000576932 TRIM28Q13263 835 aaKnown RBP12.06□□□□□ -0.48
TOM1L1-223ENST00000576932 PLBD2Q8NHP8 589 aa12.06□□□□□ -0.48
TOM1L1-223ENST00000576932 FAM89AQ96GI7 184 aa12.06□□□□□ -0.48
TOM1L1-223ENST00000576932 PCGF6Q9BYE7 350 aa12.06□□□□□ -0.48
TOM1L1-223ENST00000576932 ANKIB1Q9P2G1 1089 aa12.06□□□□□ -0.48
TOM1L1-223ENST00000576932 COL4A1P02462 1669 aa12.06□□□□□ -0.48
TOM1L1-223ENST00000576932 MYO3BQ8WXR4 1341 aa12.06□□□□□ -0.48
TOM1L1-223ENST00000576932 CEP290O15078 2479 aa12.05□□□□□ -0.48
TOM1L1-223ENST00000576932 CLCN1P35523 988 aa12.05□□□□□ -0.48
TOM1L1-223ENST00000576932 PTPN12Q05209 780 aaKnown RBP12.05□□□□□ -0.48
TOM1L1-223ENST00000576932 NBPF9Q3BBW0 867 aa12.05□□□□□ -0.48
TOM1L1-223ENST00000576932 OGFOD1Q8N543 542 aa12.05□□□□□ -0.48
TOM1L1-223ENST00000576932 COL1A1P02452 1464 aaPredicted RBP12.05□□□□□ -0.48
TOM1L1-223ENST00000576932 WNT10BO00744 389 aa12.04□□□□□ -0.48
TOM1L1-223ENST00000576932 IRS4O14654 1257 aaPredicted RBP12.04□□□□□ -0.48
TOM1L1-223ENST00000576932 EN2P19622 333 aaPredicted RBP12.04□□□□□ -0.48
TOM1L1-223ENST00000576932 PDE4DQ08499 809 aa12.04□□□□□ -0.48
TOM1L1-223ENST00000576932 MAP3K11Q16584 847 aa12.04□□□□□ -0.48
TOM1L1-223ENST00000576932 AMHR2Q16671 573 aa12.04□□□□□ -0.48
TOM1L1-223ENST00000576932 PRAMEF18Q5VWM3 479 aa12.04□□□□□ -0.48
TOM1L1-223ENST00000576932 ANKRD13DQ6ZTN6 518 aa12.04□□□□□ -0.48
TOM1L1-223ENST00000576932 APOBEC3FQ8IUX4 373 aaKnown RBP12.04□□□□□ -0.48
TOM1L1-223ENST00000576932 TTC13Q8NBP0 860 aa12.04□□□□□ -0.48
TOM1L1-223ENST00000576932 NBPF3Q9H094 633 aa12.04□□□□□ -0.48
TOM1L1-223ENST00000576932 XDHP47989 1333 aa12.04□□□□□ -0.48
TOM1L1-223ENST00000576932 RANBP2P49792 3224 aaKnown RBP12.03□□□□□ -0.48
TOM1L1-223ENST00000576932 ATP2B4P23634 1241 aa12.03□□□□□ -0.48
TOM1L1-223ENST00000576932 ADGRG1Q9Y653 693 aa12.03□□□□□ -0.48
TOM1L1-223ENST00000576932 MAPK8IP3Q9UPT6 1336 aa12.03□□□□□ -0.48
TOM1L1-223ENST00000576932 A0A0C4DFX4 3053 aa12.02□□□□□ -0.49
TOM1L1-223ENST00000576932 PSEN2P49810 448 aa12.02□□□□□ -0.49
TOM1L1-223ENST00000576932 DACT2Q5SW24 774 aa12.02□□□□□ -0.49
TOM1L1-223ENST00000576932 STRIP1Q5VSL9 837 aa12.02□□□□□ -0.49
TOM1L1-223ENST00000576932 OTUD7BQ6GQQ9 843 aa12.02□□□□□ -0.49
TOM1L1-223ENST00000576932 ZBTB38Q8NAP3 1195 aaPredicted RBP12.02□□□□□ -0.49
TOM1L1-223ENST00000576932 ZNF333Q96JL9 665 aa12.02□□□□□ -0.49
TOM1L1-223ENST00000576932 ZBED2Q9BTP6 218 aa12.02□□□□□ -0.49
TOM1L1-223ENST00000576932 EFCC1Q9HA90 598 aa12.02□□□□□ -0.49
TOM1L1-223ENST00000576932 RABGEF1Q9UJ41 708 aa12.02□□□□□ -0.49
TOM1L1-223ENST00000576932 SCAF8Q9UPN6 1271 aaKnown RBP12.02□□□□□ -0.49
TOM1L1-223ENST00000576932 MED23Q9ULK4 1368 aa12.02□□□□□ -0.49
TOM1L1-223ENST00000576932 TK2O00142 265 aa12.01□□□□□ -0.49
TOM1L1-223ENST00000576932 IGF2BP3O00425 579 aaKnown RBP eCLIP12.01□□□□□ -0.49
TOM1L1-223ENST00000576932 HOXB7P09629 217 aa12.01□□□□□ -0.49
TOM1L1-223ENST00000576932 LMOD3Q0VAK6 560 aa12.01□□□□□ -0.49
TOM1L1-223ENST00000576932 ARHGEF6Q15052 776 aa12.01□□□□□ -0.49
TOM1L1-223ENST00000576932 CCDC152Q4G0S7 254 aa12.01□□□□□ -0.49
TOM1L1-223ENST00000576932 NBPF11Q86T75 865 aa12.01□□□□□ -0.49
TOM1L1-223ENST00000576932 METTL3Q86U44 580 aaKnown RBP12.01□□□□□ -0.49
TOM1L1-223ENST00000576932 SLC10A4Q96EP9 437 aa12.01□□□□□ -0.49
TOM1L1-223ENST00000576932 SEC31BQ9NQW1 1179 aa12.01□□□□□ -0.49
TOM1L1-223ENST00000576932 PNMA3Q9UL41 463 aa12.01□□□□□ -0.49
TOM1L1-223ENST00000576932 ANGEL1Q9UNK9 670 aaKnown RBP12.01□□□□□ -0.49
TOM1L1-223ENST00000576932 PPP2R3BQ9Y5P8 575 aa12.01□□□□□ -0.49
TOM1L1-223ENST00000576932 ZNF646O15015 1829 aaPredicted RBP12□□□□□ -0.49
TOM1L1-223ENST00000576932 ATP5J2-PTCD1G3V325 749 aa12□□□□□ -0.49
TOM1L1-223ENST00000576932 DLL1O00548 723 aa12□□□□□ -0.49
TOM1L1-223ENST00000576932 SP3Q02447 781 aa12□□□□□ -0.49
TOM1L1-223ENST00000576932 CD99L2Q8TCZ2 262 aa12□□□□□ -0.49
TOM1L1-223ENST00000576932 ZBED3Q96IU2 234 aaPredicted RBP12□□□□□ -0.49
TOM1L1-223ENST00000576932 WNK4Q96J92 1243 aa12□□□□□ -0.49
TOM1L1-223ENST00000576932 CHPF2Q9P2E5 772 aa12□□□□□ -0.49
TOM1L1-223ENST00000576932 DBF4Q9UBU7 674 aaPredicted RBP12□□□□□ -0.49
TOM1L1-223ENST00000576932 PPP1R12BO60237 982 aaPredicted RBP11.99□□□□□ -0.49
TOM1L1-223ENST00000576932 PDE8AO60658 829 aa11.99□□□□□ -0.49
TOM1L1-223ENST00000576932 CRHR2Q13324 411 aa11.99□□□□□ -0.49
TOM1L1-223ENST00000576932 ANKRD18AQ8IVF6 992 aa11.99□□□□□ -0.49
TOM1L1-223ENST00000576932 PXYLP1Q8TE99 480 aa11.99□□□□□ -0.49
TOM1L1-223ENST00000576932 TATDN2Q93075 761 aa11.99□□□□□ -0.49
TOM1L1-223ENST00000576932 COA1Q9GZY4 146 aa11.99□□□□□ -0.49
TOM1L1-223ENST00000576932 GPCPD1Q9NPB8 672 aa11.99□□□□□ -0.49
TOM1L1-223ENST00000576932 HYPKQ9NX55 129 aa11.99□□□□□ -0.49
TOM1L1-223ENST00000576932 COL6A3P12111 3177 aa11.98□□□□□ -0.49
TOM1L1-223ENST00000576932 CUL9Q8IWT3 2517 aa11.98□□□□□ -0.49
TOM1L1-223ENST00000576932 H0YGN5 161 aa11.98□□□□□ -0.49
TOM1L1-223ENST00000576932 DNAJB2P25686 324 aa11.98□□□□□ -0.49
TOM1L1-223ENST00000576932 SLC9C1Q4G0N8 1177 aa11.98□□□□□ -0.49
TOM1L1-223ENST00000576932 RTL5Q5HYW3 569 aaPredicted RBP11.98□□□□□ -0.49
TOM1L1-223ENST00000576932 HDGFL1Q5TGJ6 251 aa11.98□□□□□ -0.49
TOM1L1-223ENST00000576932 NUDT18Q6ZVK8 323 aa11.98□□□□□ -0.49
TOM1L1-223ENST00000576932 KIAA1468Q9P260 1216 aa11.98□□□□□ -0.49
TOM1L1-223ENST00000576932 CHL1O00533 1208 aa11.97□□□□□ -0.49
TOM1L1-223ENST00000576932 SASH1O94885 1247 aa11.97□□□□□ -0.49
TOM1L1-223ENST00000576932 PCCAP05165 728 aaPredicted RBP11.97□□□□□ -0.49
TOM1L1-223ENST00000576932 RIPK4P57078 832 aa11.97□□□□□ -0.49
TOM1L1-223ENST00000576932 PRKG1Q13976 671 aa11.97□□□□□ -0.49
TOM1L1-223ENST00000576932 CCDC191Q8NCU4 936 aa11.97□□□□□ -0.49
TOM1L1-223ENST00000576932 SLC17A8Q8NDX2 589 aa11.97□□□□□ -0.49
TOM1L1-223ENST00000576932 ZNF428Q96B54 188 aa11.97□□□□□ -0.49
TOM1L1-223ENST00000576932 CDC5LQ99459 802 aaKnown RBP11.97□□□□□ -0.49
TOM1L1-223ENST00000576932 DEFB129Q9H1M3 183 aa11.97□□□□□ -0.49
TOM1L1-223ENST00000576932 SLC4A8Q2Y0W8 1093 aa11.96□□□□□ -0.49
TOM1L1-223ENST00000576932 PROX2Q3B8N5 592 aa11.96□□□□□ -0.49
TOM1L1-223ENST00000576932 SUPT20HL1Q3ZLR7 823 aa11.96□□□□□ -0.49
TOM1L1-223ENST00000576932 LAPTM4BQ86VI4 370 aa11.96□□□□□ -0.49
TOM1L1-223ENST00000576932 MTMR14Q8NCE2 650 aa11.96□□□□□ -0.49
TOM1L1-223ENST00000576932 BSDC1Q9NW68 430 aaPredicted RBP11.96□□□□□ -0.49
TOM1L1-223ENST00000576932 SSC5DA1L4H1 1573 aa11.96□□□□□ -0.5
TOM1L1-223ENST00000576932 ZNF804BA4D1E1 1349 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms