RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 SGPL1O95470 568 aa7.57□□□□□ -1.2
SMG6-219ENST00000575663 ITGA6P23229 1130 aa7.57□□□□□ -1.2
SMG6-219ENST00000575663 CHRNDQ07001 517 aa7.57□□□□□ -1.2
SMG6-219ENST00000575663 PPIL2Q13356 520 aa7.57□□□□□ -1.2
SMG6-219ENST00000575663 C17orf99Q6UX52 265 aa7.57□□□□□ -1.2
SMG6-219ENST00000575663 Q7L0L9 218 aa7.57□□□□□ -1.2
SMG6-219ENST00000575663 TDHQ8IZJ6 230 aa7.57□□□□□ -1.2
SMG6-219ENST00000575663 CCER1Q8TC90 406 aaPredicted RBP7.57□□□□□ -1.2
SMG6-219ENST00000575663 WRNIP1Q96S55 665 aa7.57□□□□□ -1.2
SMG6-219ENST00000575663 PARK7Q99497 189 aaKnown RBP7.57□□□□□ -1.2
SMG6-219ENST00000575663 CHMP4AQ9BY43 222 aa7.57□□□□□ -1.2
SMG6-219ENST00000575663 PHAXQ9H814 394 aaKnown RBP7.57□□□□□ -1.2
SMG6-219ENST00000575663 ZNF70Q9UC06 446 aaPredicted RBP7.57□□□□□ -1.2
SMG6-219ENST00000575663 CPA4Q9UI42 421 aa7.57□□□□□ -1.2
SMG6-219ENST00000575663 SERPINA10Q9UK55 444 aa7.57□□□□□ -1.2
SMG6-219ENST00000575663 SNCAIPQ9Y6H5 919 aa7.57□□□□□ -1.2
SMG6-219ENST00000575663 OTOFQ9HC10 1997 aa7.57□□□□□ -1.2
SMG6-219ENST00000575663 ADGRA2Q96PE1 1338 aa7.56□□□□□ -1.2
SMG6-219ENST00000575663 UNC80Q8N2C7 3258 aa7.56□□□□□ -1.2
SMG6-219ENST00000575663 TCP10L2B9ZVM9 353 aa7.56□□□□□ -1.2
SMG6-219ENST00000575663 IRF6O14896 467 aa7.56□□□□□ -1.2
SMG6-219ENST00000575663 TFRCP02786 760 aaKnown RBP7.56□□□□□ -1.2
SMG6-219ENST00000575663 IL1R1P14778 569 aa7.56□□□□□ -1.2
SMG6-219ENST00000575663 PRKCZQ05513 592 aa7.56□□□□□ -1.2
SMG6-219ENST00000575663 NEUROD2Q15784 382 aa7.56□□□□□ -1.2
SMG6-219ENST00000575663 C15orf52Q6ZUT6 534 aaKnown RBP7.56□□□□□ -1.2
SMG6-219ENST00000575663 NECAB2Q7Z6G3 386 aa7.56□□□□□ -1.2
SMG6-219ENST00000575663 ANKRD23Q86SG2 305 aa7.56□□□□□ -1.2
SMG6-219ENST00000575663 C7orf61Q8IZ16 206 aa7.56□□□□□ -1.2
SMG6-219ENST00000575663 GDF15Q99988 308 aa7.56□□□□□ -1.2
SMG6-219ENST00000575663 TMEM39BQ9GZU3 492 aa7.56□□□□□ -1.2
SMG6-219ENST00000575663 UNC93B1Q9H1C4 597 aa7.56□□□□□ -1.2
SMG6-219ENST00000575663 MTMR10Q9NXD2 777 aa7.56□□□□□ -1.2
SMG6-219ENST00000575663 FAM205AQ6ZU69 1335 aa7.55□□□□□ -1.2
SMG6-219ENST00000575663 RPTORQ8N122 1335 aa7.55□□□□□ -1.2
SMG6-219ENST00000575663 ECM29Q5VYK3 1845 aa7.55□□□□□ -1.2
SMG6-219ENST00000575663 PDHXO00330 501 aa7.55□□□□□ -1.2
SMG6-219ENST00000575663 ADCY3O60266 1144 aa7.55□□□□□ -1.2
SMG6-219ENST00000575663 CTGFP29279 349 aa7.55□□□□□ -1.2
SMG6-219ENST00000575663 BCAMP50895 628 aa7.55□□□□□ -1.2
SMG6-219ENST00000575663 PPATQ06203 517 aa7.55□□□□□ -1.2
SMG6-219ENST00000575663 MFSD14BQ5SR56 506 aa7.55□□□□□ -1.2
SMG6-219ENST00000575663 DCAF15Q66K64 600 aa7.55□□□□□ -1.2
SMG6-219ENST00000575663 CDAN1Q8IWY9 1227 aa7.55□□□□□ -1.2
SMG6-219ENST00000575663 TEPSINQ96N21 525 aa7.55□□□□□ -1.2
SMG6-219ENST00000575663 DEFB118Q96PH6 123 aa7.55□□□□□ -1.2
SMG6-219ENST00000575663 TDRD3Q9H7E2 651 aaKnown RBP7.55□□□□□ -1.2
SMG6-219ENST00000575663 PRDM6Q9NQX0 595 aa7.55□□□□□ -1.2
SMG6-219ENST00000575663 TMOD2Q9NZR1 351 aa7.55□□□□□ -1.2
SMG6-219ENST00000575663 TTF2Q9UNY4 1162 aaKnown RBP7.55□□□□□ -1.2
SMG6-219ENST00000575663 JAG2Q9Y219 1238 aa7.55□□□□□ -1.2
SMG6-219ENST00000575663 MAP3K2Q9Y2U5 619 aa7.55□□□□□ -1.2
SMG6-219ENST00000575663 AOX1Q06278 1338 aa7.54□□□□□ -1.2
SMG6-219ENST00000575663 CEP290O15078 2479 aa7.54□□□□□ -1.2
SMG6-219ENST00000575663 ANKRD18BA2A2Z9 1011 aa7.54□□□□□ -1.2
SMG6-219ENST00000575663 INHAP05111 366 aa7.54□□□□□ -1.2
SMG6-219ENST00000575663 PRKCSHP14314 528 aaPredicted RBP7.54□□□□□ -1.2
SMG6-219ENST00000575663 UBE3BQ7Z3V4 1068 aa7.54□□□□□ -1.2
SMG6-219ENST00000575663 DZIP1LQ8IYY4 767 aaKnown RBP7.54□□□□□ -1.2
SMG6-219ENST00000575663 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.54□□□□□ -1.2
SMG6-219ENST00000575663 ANKLE1Q8NAG6 615 aa7.54□□□□□ -1.2
SMG6-219ENST00000575663 PXYLP1Q8TE99 480 aa7.54□□□□□ -1.2
SMG6-219ENST00000575663 ZKSCAN4Q969J2 545 aaPredicted RBP7.54□□□□□ -1.2
SMG6-219ENST00000575663 PAWRQ96IZ0 340 aaKnown RBP7.54□□□□□ -1.2
SMG6-219ENST00000575663 UBE2OQ9C0C9 1292 aaKnown RBP7.54□□□□□ -1.2
SMG6-219ENST00000575663 MBIPQ9NS73 344 aa7.54□□□□□ -1.2
SMG6-219ENST00000575663 ZMYND8Q9ULU4 1186 aaPredicted RBP7.54□□□□□ -1.2
SMG6-219ENST00000575663 ZSWIM8A7E2V4 1837 aa7.54□□□□□ -1.2
SMG6-219ENST00000575663 IRS2Q9Y4H2 1338 aa7.53□□□□□ -1.2
SMG6-219ENST00000575663 CUL9Q8IWT3 2517 aa7.53□□□□□ -1.2
SMG6-219ENST00000575663 TNPO2O14787 897 aaKnown RBP7.53□□□□□ -1.2
SMG6-219ENST00000575663 IGKV5-2P06315 115 aa7.53□□□□□ -1.2
SMG6-219ENST00000575663 MAGEA10P43363 369 aaPredicted RBP7.53□□□□□ -1.2
SMG6-219ENST00000575663 CRKP46108 304 aa7.53□□□□□ -1.2
SMG6-219ENST00000575663 IRF5Q13568 498 aa7.53□□□□□ -1.2
SMG6-219ENST00000575663 CCDC30Q5VVM6 783 aa7.53□□□□□ -1.2
SMG6-219ENST00000575663 KSR2Q6VAB6 950 aa7.53□□□□□ -1.2
SMG6-219ENST00000575663 PLA2G12BQ9BX93 195 aa7.53□□□□□ -1.2
SMG6-219ENST00000575663 ZNF341Q9BYN7 854 aa7.53□□□□□ -1.2
SMG6-219ENST00000575663 PAK6Q9NQU5 681 aaPredicted RBP7.53□□□□□ -1.2
SMG6-219ENST00000575663 TRIM35Q9UPQ4 493 aa7.53□□□□□ -1.2
SMG6-219ENST00000575663 RPAP1Q9BWH6 1393 aaPredicted RBP7.53□□□□□ -1.2
SMG6-219ENST00000575663 VCANP13611 3396 aa7.53□□□□□ -1.2
SMG6-219ENST00000575663 SPTBN5Q9NRC6 3674 aaKnown RBP7.53□□□□□ -1.2
SMG6-219ENST00000575663 SPEF2Q9C093 1822 aa7.52□□□□□ -1.2
SMG6-219ENST00000575663 PI4KAP2A4QPH2 592 aa7.52□□□□□ -1.21
SMG6-219ENST00000575663 NEURL1BA8MQ27 555 aa7.52□□□□□ -1.21
SMG6-219ENST00000575663 SNAP23O00161 211 aa7.52□□□□□ -1.21
SMG6-219ENST00000575663 TAF5LO75529 589 aa7.52□□□□□ -1.21
SMG6-219ENST00000575663 BCRP11274 1271 aa7.52□□□□□ -1.21
SMG6-219ENST00000575663 ELNP15502 786 aa7.52□□□□□ -1.21
SMG6-219ENST00000575663 SYN1P17600 705 aa7.52□□□□□ -1.21
SMG6-219ENST00000575663 FLT3LGP49771 235 aa7.52□□□□□ -1.21
SMG6-219ENST00000575663 CALD1Q05682 793 aaKnown RBP7.52□□□□□ -1.21
SMG6-219ENST00000575663 IFIT5Q13325 482 aaKnown RBP7.52□□□□□ -1.21
SMG6-219ENST00000575663 CWF19L2Q2TBE0 894 aaKnown RBP7.52□□□□□ -1.21
SMG6-219ENST00000575663 FAM83AQ86UY5 434 aa7.52□□□□□ -1.21
SMG6-219ENST00000575663 CCDC146Q8IYE0 955 aa7.52□□□□□ -1.21
SMG6-219ENST00000575663 PI4KAP1Q8N8J0 262 aa7.52□□□□□ -1.21
SMG6-219ENST00000575663 RUNDC1Q96C34 613 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 157.5 ms