RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 SLC9C1Q4G0N8 1177 aa12.69□□□□□ -0.38
CALCOCO2-227ENST00000575560 MFSD14BQ5SR56 506 aa12.69□□□□□ -0.38
CALCOCO2-227ENST00000575560 BEND3Q5T5X7 828 aa12.69□□□□□ -0.38
CALCOCO2-227ENST00000575560 LDHAL6AQ6ZMR3 332 aa12.69□□□□□ -0.38
CALCOCO2-227ENST00000575560 DZIP1LQ8IYY4 767 aaKnown RBP12.69□□□□□ -0.38
CALCOCO2-227ENST00000575560 FAM43AQ8N2R8 423 aa12.69□□□□□ -0.38
CALCOCO2-227ENST00000575560 ZNF594Q96JF6 807 aaPredicted RBP12.69□□□□□ -0.38
CALCOCO2-227ENST00000575560 TTF2Q9UNY4 1162 aaKnown RBP12.69□□□□□ -0.38
CALCOCO2-227ENST00000575560 COLQQ9Y215 455 aaPredicted RBP12.69□□□□□ -0.38
CALCOCO2-227ENST00000575560 PTCH2Q9Y6C5 1203 aa12.69□□□□□ -0.38
CALCOCO2-227ENST00000575560 CCL15-CCL14A0A0B4J2E2 113 aa12.68□□□□□ -0.38
CALCOCO2-227ENST00000575560 VAMP4O75379 141 aa12.68□□□□□ -0.38
CALCOCO2-227ENST00000575560 HIBADHP31937 336 aaKnown RBP12.68□□□□□ -0.38
CALCOCO2-227ENST00000575560 UBE4AQ14139 1066 aa12.68□□□□□ -0.38
CALCOCO2-227ENST00000575560 TAF1CQ15572 869 aaPredicted RBP12.68□□□□□ -0.38
CALCOCO2-227ENST00000575560 CCL15Q16663 113 aa12.68□□□□□ -0.38
CALCOCO2-227ENST00000575560 CCDC57Q2TAC2 916 aa12.68□□□□□ -0.38
CALCOCO2-227ENST00000575560 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.68□□□□□ -0.38
CALCOCO2-227ENST00000575560 FAM84BQ96KN1 310 aaPredicted RBP12.68□□□□□ -0.38
CALCOCO2-227ENST00000575560 TMEM39BQ9GZU3 492 aa12.68□□□□□ -0.38
CALCOCO2-227ENST00000575560 CHMP3Q9Y3E7 222 aa12.68□□□□□ -0.38
CALCOCO2-227ENST00000575560 TCP10L2B9ZVM9 353 aa12.67□□□□□ -0.38
CALCOCO2-227ENST00000575560 F6X3S4 739 aa12.67□□□□□ -0.38
CALCOCO2-227ENST00000575560 CRKP46108 304 aa12.67□□□□□ -0.38
CALCOCO2-227ENST00000575560 GYG1P46976 350 aa12.67□□□□□ -0.38
CALCOCO2-227ENST00000575560 CNNM1Q9NRU3 951 aa12.67□□□□□ -0.38
CALCOCO2-227ENST00000575560 SPDYE5A6NIY4 337 aa12.66□□□□□ -0.38
CALCOCO2-227ENST00000575560 TLR2O60603 784 aa12.66□□□□□ -0.38
CALCOCO2-227ENST00000575560 TNNI2P48788 182 aa12.66□□□□□ -0.38
CALCOCO2-227ENST00000575560 SLC4A8Q2Y0W8 1093 aa12.66□□□□□ -0.38
CALCOCO2-227ENST00000575560 OTUD5Q96G74 571 aa12.66□□□□□ -0.38
CALCOCO2-227ENST00000575560 ZCCHC17Q9NP64 241 aaKnown RBP12.66□□□□□ -0.38
CALCOCO2-227ENST00000575560 CSADQ9Y600 493 aa12.66□□□□□ -0.38
CALCOCO2-227ENST00000575560 A0A1B0GUL6 1792 aa12.66□□□□□ -0.38
CALCOCO2-227ENST00000575560 OTOFQ9HC10 1997 aa12.65□□□□□ -0.38
CALCOCO2-227ENST00000575560 H0YGN5 161 aa12.65□□□□□ -0.38
CALCOCO2-227ENST00000575560 GRM8O00222 908 aa12.65□□□□□ -0.38
CALCOCO2-227ENST00000575560 GNRH1P01148 92 aa12.65□□□□□ -0.38
CALCOCO2-227ENST00000575560 LACTBP83111 547 aaPredicted RBP12.65□□□□□ -0.38
CALCOCO2-227ENST00000575560 HDLBPQ00341 1268 aaKnown RBP12.65□□□□□ -0.38
CALCOCO2-227ENST00000575560 GRIK5Q16478 980 aa12.65□□□□□ -0.38
CALCOCO2-227ENST00000575560 CCDC184Q52MB2 194 aa12.65□□□□□ -0.38
CALCOCO2-227ENST00000575560 TAF7LQ5H9L4 462 aa12.65□□□□□ -0.38
CALCOCO2-227ENST00000575560 SH3TC2Q8TF17 1288 aa12.65□□□□□ -0.38
CALCOCO2-227ENST00000575560 ARHGAP39Q9C0H5 1083 aa12.65□□□□□ -0.38
CALCOCO2-227ENST00000575560 RIPOR2Q9Y4F9 1068 aa12.65□□□□□ -0.38
CALCOCO2-227ENST00000575560 SNCAIPQ9Y6H5 919 aa12.65□□□□□ -0.38
CALCOCO2-227ENST00000575560 CEP290O15078 2479 aa12.65□□□□□ -0.38
CALCOCO2-227ENST00000575560 FANCIQ9NVI1 1328 aa12.64□□□□□ -0.39
CALCOCO2-227ENST00000575560 BTBD19C9JJ37 291 aa12.64□□□□□ -0.39
CALCOCO2-227ENST00000575560 CETPP11597 493 aa12.64□□□□□ -0.39
CALCOCO2-227ENST00000575560 FBXO33Q7Z6M2 555 aa12.64□□□□□ -0.39
CALCOCO2-227ENST00000575560 ERO1BQ86YB8 467 aa12.64□□□□□ -0.39
CALCOCO2-227ENST00000575560 MRIQ9BWK5 157 aa12.64□□□□□ -0.39
CALCOCO2-227ENST00000575560 PUS3Q9BZE2 481 aaKnown RBP12.64□□□□□ -0.39
CALCOCO2-227ENST00000575560 A0A0C4DFX4 3053 aa12.63□□□□□ -0.39
CALCOCO2-227ENST00000575560 IRF6O14896 467 aa12.63□□□□□ -0.39
CALCOCO2-227ENST00000575560 WDHD1O75717 1129 aaPredicted RBP12.63□□□□□ -0.39
CALCOCO2-227ENST00000575560 MYCP01106 439 aaPredicted RBP12.63□□□□□ -0.39
CALCOCO2-227ENST00000575560 PRMT2P55345 433 aa12.63□□□□□ -0.39
CALCOCO2-227ENST00000575560 EXOSC9Q06265 439 aaKnown RBP12.63□□□□□ -0.39
CALCOCO2-227ENST00000575560 KIF22Q14807 665 aa12.63□□□□□ -0.39
CALCOCO2-227ENST00000575560 ZKSCAN4Q969J2 545 aaPredicted RBP12.63□□□□□ -0.39
CALCOCO2-227ENST00000575560 KAZALD1Q96I82 304 aa12.63□□□□□ -0.39
CALCOCO2-227ENST00000575560 CACNA1FO60840 1977 aa12.63□□□□□ -0.39
CALCOCO2-227ENST00000575560 ALDH1L1O75891 902 aa12.62□□□□□ -0.39
CALCOCO2-227ENST00000575560 CACNB3P54284 484 aa12.62□□□□□ -0.39
CALCOCO2-227ENST00000575560 PPIL2Q13356 520 aa12.62□□□□□ -0.39
CALCOCO2-227ENST00000575560 SNAPC2Q13487 334 aa12.62□□□□□ -0.39
CALCOCO2-227ENST00000575560 FKBP1CQ5VVH2 108 aa12.62□□□□□ -0.39
CALCOCO2-227ENST00000575560 C17orf99Q6UX52 265 aa12.62□□□□□ -0.39
CALCOCO2-227ENST00000575560 FAM83AQ86UY5 434 aa12.62□□□□□ -0.39
CALCOCO2-227ENST00000575560 WDR63Q8IWG1 891 aa12.62□□□□□ -0.39
CALCOCO2-227ENST00000575560 ZDHHC15Q96MV8 337 aa12.62□□□□□ -0.39
CALCOCO2-227ENST00000575560 C9orf78Q9NZ63 289 aaPredicted RBP12.62□□□□□ -0.39
CALCOCO2-227ENST00000575560 TRIOBPQ9H2D6 2365 aa12.62□□□□□ -0.39
CALCOCO2-227ENST00000575560 MROH5Q6ZUA9 1318 aa12.62□□□□□ -0.39
CALCOCO2-227ENST00000575560 CTGFP29279 349 aa12.61□□□□□ -0.39
CALCOCO2-227ENST00000575560 APOBEC3HQ6NTF7 200 aaKnown RBP12.61□□□□□ -0.39
CALCOCO2-227ENST00000575560 TBC1D22AQ8WUA7 517 aa12.61□□□□□ -0.39
CALCOCO2-227ENST00000575560 TEKT1Q969V4 418 aa12.61□□□□□ -0.39
CALCOCO2-227ENST00000575560 SHISA4Q96DD7 197 aa12.61□□□□□ -0.39
CALCOCO2-227ENST00000575560 HOOK2Q96ED9 719 aa12.61□□□□□ -0.39
CALCOCO2-227ENST00000575560 WRNIP1Q96S55 665 aa12.61□□□□□ -0.39
CALCOCO2-227ENST00000575560 IQSEC3Q9UPP2 1182 aaPredicted RBP12.61□□□□□ -0.39
CALCOCO2-227ENST00000575560 ARAP2Q8WZ64 1704 aa12.6□□□□□ -0.39
CALCOCO2-227ENST00000575560 PPATQ06203 517 aa12.6□□□□□ -0.39
CALCOCO2-227ENST00000575560 MTFR1Q15390 333 aa12.6□□□□□ -0.39
CALCOCO2-227ENST00000575560 UBE2Q1Q7Z7E8 422 aa12.6□□□□□ -0.39
CALCOCO2-227ENST00000575560 VPS37DQ86XT2 251 aa12.6□□□□□ -0.39
CALCOCO2-227ENST00000575560 SUCLG2Q96I99 432 aa12.6□□□□□ -0.39
CALCOCO2-227ENST00000575560 TRIM47Q96LD4 638 aa12.6□□□□□ -0.39
CALCOCO2-227ENST00000575560 UTYO14607 1347 aa12.6□□□□□ -0.39
CALCOCO2-227ENST00000575560 COL6A3P12111 3177 aa12.59□□□□□ -0.39
CALCOCO2-227ENST00000575560 NBPF7P0C2Y1 421 aaPredicted RBP12.59□□□□□ -0.39
CALCOCO2-227ENST00000575560 PSMC4P43686 418 aa12.59□□□□□ -0.39
CALCOCO2-227ENST00000575560 CHAF1AQ13111 956 aaPredicted RBP12.59□□□□□ -0.39
CALCOCO2-227ENST00000575560 LRRC24Q50LG9 513 aa12.59□□□□□ -0.39
CALCOCO2-227ENST00000575560 CAVIN4Q5BKX8 364 aa12.59□□□□□ -0.39
CALCOCO2-227ENST00000575560 HHIPL2Q6UWX4 724 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 199.9 ms