RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 SPRED3Q2MJR0 410 aa6.9□□□□□ -1.3
TSR1-203ENST00000575049 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.9□□□□□ -1.31e-323■■■□□ 16.4
TSR1-203ENST00000575049 ALG1LQ6GMV1 187 aa6.9□□□□□ -1.3
TSR1-203ENST00000575049 PRPF40BQ6NWY9 871 aaKnown RBP6.9□□□□□ -1.3
TSR1-203ENST00000575049 SHISA2Q6UWI4 295 aa6.9□□□□□ -1.3
TSR1-203ENST00000575049 CD163Q86VB7 1156 aa6.9□□□□□ -1.3
TSR1-203ENST00000575049 TMEM87AQ8NBN3 555 aa6.9□□□□□ -1.3
TSR1-203ENST00000575049 GALNT11Q8NCW6 608 aa6.9□□□□□ -1.3
TSR1-203ENST00000575049 CARD10Q9BWT7 1032 aa6.9□□□□□ -1.3
TSR1-203ENST00000575049 TGIF2Q9GZN2 237 aa6.9□□□□□ -1.3
TSR1-203ENST00000575049 CAPN10Q9HC96 672 aa6.9□□□□□ -1.3
TSR1-203ENST00000575049 TRAK1Q9UPV9 953 aa6.9□□□□□ -1.3
TSR1-203ENST00000575049 SUGT1Q9Y2Z0 365 aa6.9□□□□□ -1.3
TSR1-203ENST00000575049 C1QTNF9BB2RNN3 333 aa6.89□□□□□ -1.31
TSR1-203ENST00000575049 TM4SF5O14894 197 aa6.89□□□□□ -1.31
TSR1-203ENST00000575049 PIP4K2BP78356 416 aa6.89□□□□□ -1.31
TSR1-203ENST00000575049 TMED8Q6PL24 325 aaPredicted RBP6.89□□□□□ -1.31
TSR1-203ENST00000575049 GLIS3Q8NEA6 775 aa6.89□□□□□ -1.31
TSR1-203ENST00000575049 DCAF11Q8TEB1 546 aa6.89□□□□□ -1.31
TSR1-203ENST00000575049 WNT8BQ93098 351 aa6.89□□□□□ -1.31
TSR1-203ENST00000575049 ABCB6Q9NP58 842 aa6.89□□□□□ -1.31
TSR1-203ENST00000575049 SEC31BQ9NQW1 1179 aa6.89□□□□□ -1.31
TSR1-203ENST00000575049 C9orf172C9J069 976 aa6.88□□□□□ -1.31
TSR1-203ENST00000575049 IGBP1P78318 339 aa6.88□□□□□ -1.31
TSR1-203ENST00000575049 RBL2Q08999 1139 aa6.88□□□□□ -1.31
TSR1-203ENST00000575049 IKBKEQ14164 716 aa6.88□□□□□ -1.31
TSR1-203ENST00000575049 PTPROQ16827 1216 aa6.88□□□□□ -1.31
TSR1-203ENST00000575049 IGF2-ASQ6U949 168 aa6.88□□□□□ -1.31
TSR1-203ENST00000575049 NLGN1Q8N2Q7 840 aa6.88□□□□□ -1.31
TSR1-203ENST00000575049 KLHL23Q8NBE8 558 aa6.88□□□□□ -1.31
TSR1-203ENST00000575049 SLC7A3Q8WY07 619 aa6.88□□□□□ -1.31
TSR1-203ENST00000575049 LENG1Q96BZ8 264 aaPredicted RBP6.88□□□□□ -1.31
TSR1-203ENST00000575049 GMLQ99445 158 aa6.88□□□□□ -1.31
TSR1-203ENST00000575049 BCO2Q9BYV7 579 aa6.88□□□□□ -1.31
TSR1-203ENST00000575049 METTL14Q9HCE5 456 aaKnown RBP6.88□□□□□ -1.31
TSR1-203ENST00000575049 SLC52A1Q9NWF4 448 aa6.88□□□□□ -1.31
TSR1-203ENST00000575049 TMEM238LA0A1B0GVL6 79 aa6.87□□□□□ -1.31
TSR1-203ENST00000575049 SOX1O00570 391 aaPredicted RBP6.87□□□□□ -1.31
TSR1-203ENST00000575049 ESRRAP11474 423 aaPredicted RBP6.87□□□□□ -1.31
TSR1-203ENST00000575049 ITPKAP23677 461 aa6.87□□□□□ -1.31
TSR1-203ENST00000575049 FANCCQ00597 558 aa6.87□□□□□ -1.31
TSR1-203ENST00000575049 FOXD4L6Q3SYB3 417 aaPredicted RBP6.87□□□□□ -1.31
TSR1-203ENST00000575049 HGSNATQ68CP4 663 aa6.87□□□□□ -1.31
TSR1-203ENST00000575049 FOXD4L3Q6VB84 417 aaPredicted RBP6.87□□□□□ -1.31
TSR1-203ENST00000575049 ZNF526Q8TF50 670 aaPredicted RBP6.87□□□□□ -1.31
TSR1-203ENST00000575049 RNF34Q969K3 372 aa6.87□□□□□ -1.31
TSR1-203ENST00000575049 KLHDC7BQ96G42 594 aa6.87□□□□□ -1.31
TSR1-203ENST00000575049 CLEC4MQ9H2X3 399 aaPredicted RBP6.87□□□□□ -1.31
TSR1-203ENST00000575049 ACBD3Q9H3P7 528 aa6.87□□□□□ -1.31
TSR1-203ENST00000575049 ZNF576Q9H609 170 aa6.87□□□□□ -1.31
TSR1-203ENST00000575049 CCSER2Q9H7U1 834 aa6.87□□□□□ -1.31
TSR1-203ENST00000575049 OSGEPQ9NPF4 335 aa6.87□□□□□ -1.31
TSR1-203ENST00000575049 USP21Q9UK80 565 aa6.87□□□□□ -1.31
TSR1-203ENST00000575049 PRPF40AO75400 957 aaKnown RBP6.86□□□□□ -1.31
TSR1-203ENST00000575049 CD68P34810 354 aaPredicted RBP6.86□□□□□ -1.31
TSR1-203ENST00000575049 ARL4DP49703 201 aa6.86□□□□□ -1.31
TSR1-203ENST00000575049 NRG1Q02297 640 aaPredicted RBP6.86□□□□□ -1.31
TSR1-203ENST00000575049 PTPN12Q05209 780 aaKnown RBP6.86□□□□□ -1.31
TSR1-203ENST00000575049 PCDH1Q08174 1060 aa6.86□□□□□ -1.31
TSR1-203ENST00000575049 C19orf57Q0VDD7 668 aa6.86□□□□□ -1.31
TSR1-203ENST00000575049 TCEAL1Q15170 157 aa6.86□□□□□ -1.31
TSR1-203ENST00000575049 GPAT2Q6NUI2 795 aa6.86□□□□□ -1.31
TSR1-203ENST00000575049 NXPE4Q6UWF7 544 aa6.86□□□□□ -1.31
TSR1-203ENST00000575049 PMFBP1Q8TBY8 1022 aa6.86□□□□□ -1.31
TSR1-203ENST00000575049 KCNB2Q92953 911 aa6.86□□□□□ -1.31
TSR1-203ENST00000575049 FAM161BQ96MY7 647 aa6.86□□□□□ -1.31
TSR1-203ENST00000575049 ZSWIM4Q9H7M6 989 aa6.86□□□□□ -1.31
TSR1-203ENST00000575049 METTL5Q9NRN9 209 aaKnown RBP6.86□□□□□ -1.31
TSR1-203ENST00000575049 KCNK4Q9NYG8 393 aa6.86□□□□□ -1.31
TSR1-203ENST00000575049 hCG_2014768A0A024R1R8 64 aa6.85□□□□□ -1.31
TSR1-203ENST00000575049 FCGRTP55899 365 aa6.85□□□□□ -1.31
TSR1-203ENST00000575049 FGD1P98174 961 aa6.85□□□□□ -1.31
TSR1-203ENST00000575049 ADGRE1Q14246 886 aa6.85□□□□□ -1.31
TSR1-203ENST00000575049 MBTPS1Q14703 1052 aa6.85□□□□□ -1.31
TSR1-203ENST00000575049 SUZ12Q15022 739 aaKnown RBP6.85□□□□□ -1.31
TSR1-203ENST00000575049 OSBPL7Q9BZF2 842 aa6.85□□□□□ -1.31
TSR1-203ENST00000575049 MRPL18Q9H0U6 180 aaKnown RBP6.85□□□□□ -1.31
TSR1-203ENST00000575049 SOX17Q9H6I2 414 aaPredicted RBP6.85□□□□□ -1.31
TSR1-203ENST00000575049 PPP4R2Q9NY27 417 aa6.85□□□□□ -1.31
TSR1-203ENST00000575049 SPG7Q9UQ90 795 aa6.85□□□□□ -1.31
TSR1-203ENST00000575049 GIPC1O14908 333 aa6.84□□□□□ -1.31
TSR1-203ENST00000575049 DDX3YO15523 660 aaKnown RBP6.84□□□□□ -1.31
TSR1-203ENST00000575049 TPD52L2O43399 206 aaKnown RBP6.84□□□□□ -1.31
TSR1-203ENST00000575049 ADAM11O75078 769 aa6.84□□□□□ -1.31
TSR1-203ENST00000575049 PROCP04070 461 aa6.84□□□□□ -1.31
TSR1-203ENST00000575049 TNNI2P48788 182 aa6.84□□□□□ -1.31
TSR1-203ENST00000575049 XPCQ01831 940 aaPredicted RBP6.84□□□□□ -1.31
TSR1-203ENST00000575049 GNL2Q13823 731 aaKnown RBP6.84□□□□□ -1.31
TSR1-203ENST00000575049 ZNF423Q2M1K9 1284 aa6.84□□□□□ -1.31
TSR1-203ENST00000575049 CCDC181Q5TID7 509 aa6.84□□□□□ -1.31
TSR1-203ENST00000575049 DTHD1Q6ZMT9 781 aa6.84□□□□□ -1.31
TSR1-203ENST00000575049 TICAM2Q86XR7 235 aa6.84□□□□□ -1.31
TSR1-203ENST00000575049 DUSP9Q99956 384 aaKnown RBP6.84□□□□□ -1.31
TSR1-203ENST00000575049 KLHL42Q9P2K6 505 aa6.84□□□□□ -1.31
TSR1-203ENST00000575049 PARP2Q9UGN5 583 aa6.84□□□□□ -1.31
TSR1-203ENST00000575049 MSTNO14793 375 aa6.83□□□□□ -1.32
TSR1-203ENST00000575049 WISP1O95388 367 aa6.83□□□□□ -1.32
TSR1-203ENST00000575049 B3GALT4O96024 378 aa6.83□□□□□ -1.32
TSR1-203ENST00000575049 IGHA1P01876 353 aa6.83□□□□□ -1.32
TSR1-203ENST00000575049 XRCC5P13010 732 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms