RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 SUPT20HL1Q3ZLR7 823 aa12.02□□□□□ -0.49
NPLOC4-216ENST00000574344 DZIP1LQ8IYY4 767 aaKnown RBP12.02□□□□□ -0.49
NPLOC4-216ENST00000574344 LPIN2Q92539 896 aa12.02□□□□□ -0.49
NPLOC4-216ENST00000574344 TDRD3Q9H7E2 651 aaKnown RBP12.02□□□□□ -0.49
NPLOC4-216ENST00000574344 RNF186Q9NXI6 227 aa12.02□□□□□ -0.49
NPLOC4-216ENST00000574344 CEP126Q9P2H0 1117 aa12.02□□□□□ -0.49
NPLOC4-216ENST00000574344 SUPT16HQ9Y5B9 1047 aaKnown RBP12.02□□□□□ -0.49
NPLOC4-216ENST00000574344 MAST3O60307 1309 aa12.02□□□□□ -0.49
NPLOC4-216ENST00000574344 AOX1Q06278 1338 aa12.02□□□□□ -0.49
NPLOC4-216ENST00000574344 TCP10L2B9ZVM9 353 aa12.01□□□□□ -0.49
NPLOC4-216ENST00000574344 FGFR2P21802 821 aa12.01□□□□□ -0.49
NPLOC4-216ENST00000574344 TNNI2P48788 182 aa12.01□□□□□ -0.49
NPLOC4-216ENST00000574344 SREBF2Q12772 1141 aa12.01□□□□□ -0.49
NPLOC4-216ENST00000574344 DGKZQ13574 1117 aa12.01□□□□□ -0.49
NPLOC4-216ENST00000574344 RASA3Q14644 834 aa12.01□□□□□ -0.49
NPLOC4-216ENST00000574344 ATP2B3Q16720 1220 aa12.01□□□□□ -0.49
NPLOC4-216ENST00000574344 SPDYE2Q495Y8 402 aa12.01□□□□□ -0.49
NPLOC4-216ENST00000574344 ATG9AQ7Z3C6 839 aa12.01□□□□□ -0.49
NPLOC4-216ENST00000574344 ARHGAP45Q92619 1136 aa12.01□□□□□ -0.49
NPLOC4-216ENST00000574344 TEKT1Q969V4 418 aa12.01□□□□□ -0.49
NPLOC4-216ENST00000574344 CLUAP1Q96AJ1 413 aa12.01□□□□□ -0.49
NPLOC4-216ENST00000574344 TMOD2Q9NZR1 351 aa12.01□□□□□ -0.49
NPLOC4-216ENST00000574344 ZNF70Q9UC06 446 aaPredicted RBP12.01□□□□□ -0.49
NPLOC4-216ENST00000574344 FBXO3Q9UK99 471 aa12.01□□□□□ -0.49
NPLOC4-216ENST00000574344 PA2G4Q9UQ80 394 aaKnown RBP12.01□□□□□ -0.49
NPLOC4-216ENST00000574344 CCDC85CA6NKD9 419 aa12□□□□□ -0.49
NPLOC4-216ENST00000574344 BCAR3O75815 825 aa12□□□□□ -0.49
NPLOC4-216ENST00000574344 CIAO1O76071 339 aa12□□□□□ -0.49
NPLOC4-216ENST00000574344 TRIM27P14373 513 aa12□□□□□ -0.49
NPLOC4-216ENST00000574344 IL15P40933 162 aaPredicted RBP12□□□□□ -0.49
NPLOC4-216ENST00000574344 IREB2P48200 963 aaKnown RBP12□□□□□ -0.49
NPLOC4-216ENST00000574344 GRIK5Q16478 980 aa12□□□□□ -0.49
NPLOC4-216ENST00000574344 NBPF12Q5TAG4 269 aaPredicted RBP12□□□□□ -0.49
NPLOC4-216ENST00000574344 INTS3Q68E01 1043 aaKnown RBP12□□□□□ -0.49
NPLOC4-216ENST00000574344 ATF7IPQ6VMQ6 1270 aa12□□□□□ -0.49
NPLOC4-216ENST00000574344 SLC10A4Q96EP9 437 aa12□□□□□ -0.49
NPLOC4-216ENST00000574344 MCOLN1Q9GZU1 580 aa12□□□□□ -0.49
NPLOC4-216ENST00000574344 GNL3LQ9NVN8 582 aaKnown RBP12□□□□□ -0.49
NPLOC4-216ENST00000574344 SRGAP3O43295 1099 aa11.99□□□□□ -0.49
NPLOC4-216ENST00000574344 DOCK2Q92608 1830 aa11.99□□□□□ -0.49
NPLOC4-216ENST00000574344 CACNB3P54284 484 aa11.98□□□□□ -0.49
NPLOC4-216ENST00000574344 HDLBPQ00341 1268 aaKnown RBP11.98□□□□□ -0.49
NPLOC4-216ENST00000574344 LDLRAD1Q5T700 205 aa11.98□□□□□ -0.49
NPLOC4-216ENST00000574344 ZKSCAN2Q63HK3 967 aa11.98□□□□□ -0.49
NPLOC4-216ENST00000574344 WDR66Q8TBY9 1149 aa11.98□□□□□ -0.49
NPLOC4-216ENST00000574344 CLMNQ96JQ2 1002 aa11.98□□□□□ -0.49
NPLOC4-216ENST00000574344 TMEM39BQ9GZU3 492 aa11.98□□□□□ -0.49
NPLOC4-216ENST00000574344 TNNQ9UQP3 1299 aa11.98□□□□□ -0.49
NPLOC4-216ENST00000574344 TBC1D8O95759 1140 aa11.97□□□□□ -0.49
NPLOC4-216ENST00000574344 GNAI2P04899 355 aa11.97□□□□□ -0.49
NPLOC4-216ENST00000574344 MAP3K11Q16584 847 aa11.97□□□□□ -0.49
NPLOC4-216ENST00000574344 SPRYD7Q5W111 196 aa11.97□□□□□ -0.49
NPLOC4-216ENST00000574344 FTSJ3Q8IY81 847 aaKnown RBP11.97□□□□□ -0.49
NPLOC4-216ENST00000574344 ANKRD13AQ8IZ07 590 aa11.97□□□□□ -0.49
NPLOC4-216ENST00000574344 WNK4Q96J92 1243 aa11.97□□□□□ -0.49
NPLOC4-216ENST00000574344 COPRSQ9NQ92 184 aa11.97□□□□□ -0.49
NPLOC4-216ENST00000574344 SUGT1Q9Y2Z0 365 aa11.97□□□□□ -0.49
NPLOC4-216ENST00000574344 MANSC4A6NHS7 340 aaPredicted RBP11.96□□□□□ -0.49
NPLOC4-216ENST00000574344 USP2O75604 605 aaPredicted RBP11.96□□□□□ -0.49
NPLOC4-216ENST00000574344 LDHBP07195 334 aaKnown RBP11.96□□□□□ -0.49
NPLOC4-216ENST00000574344 ZBTB48P10074 688 aaPredicted RBP11.96□□□□□ -0.49
NPLOC4-216ENST00000574344 PHKA1P46020 1223 aa11.96□□□□□ -0.49
NPLOC4-216ENST00000574344 TM4SF4P48230 202 aa11.96□□□□□ -0.49
NPLOC4-216ENST00000574344 ZDHHC15Q96MV8 337 aa11.96□□□□□ -0.49
NPLOC4-216ENST00000574344 ELP3Q9H9T3 547 aa11.96□□□□□ -0.49
NPLOC4-216ENST00000574344 DENND2AQ9ULE3 1009 aa11.96□□□□□ -0.49
NPLOC4-216ENST00000574344 UNCXA6NJT0 531 aa11.95□□□□□ -0.5
NPLOC4-216ENST00000574344 PRDX5P30044 214 aa11.95□□□□□ -0.5
NPLOC4-216ENST00000574344 ADORA1P30542 326 aa11.95□□□□□ -0.5
NPLOC4-216ENST00000574344 HHIPL2Q6UWX4 724 aa11.95□□□□□ -0.5
NPLOC4-216ENST00000574344 CTU1Q7Z7A3 348 aaKnown RBP11.95□□□□□ -0.5
NPLOC4-216ENST00000574344 CDAN1Q8IWY9 1227 aa11.95□□□□□ -0.5
NPLOC4-216ENST00000574344 TMEM57Q8N5G2 664 aa11.95□□□□□ -0.5
NPLOC4-216ENST00000574344 AKAP2Q9Y2D5 859 aa11.95□□□□□ -0.5
NPLOC4-216ENST00000574344 CSADQ9Y600 493 aa11.95□□□□□ -0.5
NPLOC4-216ENST00000574344 A0A1B0GUL7 405 aa11.94□□□□□ -0.5
NPLOC4-216ENST00000574344 SEMA3EO15041 775 aa11.94□□□□□ -0.5
NPLOC4-216ENST00000574344 ALDH1A1P00352 501 aa11.94□□□□□ -0.5
NPLOC4-216ENST00000574344 TIMM10P62072 90 aa11.94□□□□□ -0.5
NPLOC4-216ENST00000574344 TFCP2Q12800 502 aa11.94□□□□□ -0.5
NPLOC4-216ENST00000574344 G3BP1Q13283 466 aaKnown RBP eCLIP11.94□□□□□ -0.5
NPLOC4-216ENST00000574344 MTX1Q13505 466 aa11.94□□□□□ -0.5
NPLOC4-216ENST00000574344 DIXDC1Q155Q3 683 aa11.94□□□□□ -0.5
NPLOC4-216ENST00000574344 GORABQ5T7V8 394 aa11.94□□□□□ -0.5
NPLOC4-216ENST00000574344 ERICH6BQ5W0A0 696 aa11.94□□□□□ -0.5
NPLOC4-216ENST00000574344 CCDC102BQ68D86 513 aa11.94□□□□□ -0.5
NPLOC4-216ENST00000574344 APOBEC3HQ6NTF7 200 aaKnown RBP11.94□□□□□ -0.5
NPLOC4-216ENST00000574344 DZIP1Q86YF9 867 aaKnown RBP11.94□□□□□ -0.5
NPLOC4-216ENST00000574344 ITPRIPQ8IWB1 547 aa11.94□□□□□ -0.5
NPLOC4-216ENST00000574344 ZGPATQ8N5A5 531 aaKnown RBP11.94□□□□□ -0.5
NPLOC4-216ENST00000574344 OPTNQ96CV9 577 aa11.94□□□□□ -0.5
NPLOC4-216ENST00000574344 HOOK2Q96ED9 719 aa11.94□□□□□ -0.5
NPLOC4-216ENST00000574344 TEPSINQ96N21 525 aa11.94□□□□□ -0.5
NPLOC4-216ENST00000574344 NEUROD6Q96NK8 337 aa11.94□□□□□ -0.5
NPLOC4-216ENST00000574344 DAGLAQ9Y4D2 1042 aa11.94□□□□□ -0.5
NPLOC4-216ENST00000574344 MAST2Q6P0Q8 1798 aa11.94□□□□□ -0.5
NPLOC4-216ENST00000574344 RPAP1Q9BWH6 1393 aaPredicted RBP11.93□□□□□ -0.5
NPLOC4-216ENST00000574344 MYO5AQ9Y4I1 1855 aaKnown RBP11.93□□□□□ -0.5
NPLOC4-216ENST00000574344 INHBEP58166 350 aa11.93□□□□□ -0.5
NPLOC4-216ENST00000574344 OS9Q13438 667 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms