RNA–Protein interactions for RNA: ENST00000573603.1

POLR2A-202, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-202ENST00000573603 FBXO46Q6PJ61 603 aaPredicted RBP15.56■□□□□ 0.08
POLR2A-202ENST00000573603 DZIP1LQ8IYY4 767 aaKnown RBP15.56■□□□□ 0.08
POLR2A-202ENST00000573603 ELP3Q9H9T3 547 aa15.56■□□□□ 0.08
POLR2A-202ENST00000573603 PTPRCP08575 1304 aa15.56■□□□□ 0.08
POLR2A-202ENST00000573603 CAVIN4Q5BKX8 364 aa15.55■□□□□ 0.08
POLR2A-202ENST00000573603 ANKRD13AQ8IZ07 590 aa15.55■□□□□ 0.08
POLR2A-202ENST00000573603 SSH1Q8WYL5 1049 aa15.55■□□□□ 0.08
POLR2A-202ENST00000573603 E9PSI1 815 aa15.54■□□□□ 0.08
POLR2A-202ENST00000573603 CACNB3P54284 484 aa15.54■□□□□ 0.08
POLR2A-202ENST00000573603 INHBEP58166 350 aa15.54■□□□□ 0.08
POLR2A-202ENST00000573603 FBXO33Q7Z6M2 555 aa15.54■□□□□ 0.08
POLR2A-202ENST00000573603 VGLL2Q8N8G2 317 aa15.54■□□□□ 0.08
POLR2A-202ENST00000573603 TMEM39BQ9GZU3 492 aa15.54■□□□□ 0.08
POLR2A-202ENST00000573603 TRIM17Q9Y577 477 aa15.54■□□□□ 0.08
POLR2A-202ENST00000573603 UNCXA6NJT0 531 aa15.53■□□□□ 0.08
POLR2A-202ENST00000573603 PDE8BO95263 885 aa15.53■□□□□ 0.08
POLR2A-202ENST00000573603 SLC34A2O95436 690 aa15.53■□□□□ 0.08
POLR2A-202ENST00000573603 TNNI2P48788 182 aa15.53■□□□□ 0.08
POLR2A-202ENST00000573603 OPTNQ96CV9 577 aa15.53■□□□□ 0.08
POLR2A-202ENST00000573603 TEPSINQ96N21 525 aa15.53■□□□□ 0.08
POLR2A-202ENST00000573603 BCAMP50895 628 aa15.52■□□□□ 0.08
POLR2A-202ENST00000573603 CRHR2Q13324 411 aa15.52■□□□□ 0.08
POLR2A-202ENST00000573603 TBC1D22AQ8WUA7 517 aa15.52■□□□□ 0.08
POLR2A-202ENST00000573603 CNKSR2Q8WXI2 1034 aa15.52■□□□□ 0.08
POLR2A-202ENST00000573603 TEKT1Q969V4 418 aa15.52■□□□□ 0.08
POLR2A-202ENST00000573603 USP44Q9H0E7 712 aa15.52■□□□□ 0.08
POLR2A-202ENST00000573603 PDE4DIPQ5VU43 2346 aa15.52■□□□□ 0.07
POLR2A-202ENST00000573603 VGLL4Q14135 290 aa15.51■□□□□ 0.07
POLR2A-202ENST00000573603 PUM3Q15397 648 aaKnown RBP15.51■□□□□ 0.07
POLR2A-202ENST00000573603 OTUD7BQ6GQQ9 843 aa15.51■□□□□ 0.07
POLR2A-202ENST00000573603 OTOP1Q7RTM1 612 aa15.51■□□□□ 0.07
POLR2A-202ENST00000573603 CD99L2Q8TCZ2 262 aa15.51■□□□□ 0.07
POLR2A-202ENST00000573603 SMC4Q9NTJ3 1288 aa15.51■□□□□ 0.07
POLR2A-202ENST00000573603 IFIT1P09914 478 aaKnown RBP15.5■□□□□ 0.07
POLR2A-202ENST00000573603 SLFN5Q08AF3 891 aa15.5■□□□□ 0.07
POLR2A-202ENST00000573603 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.5■□□□□ 0.07
POLR2A-202ENST00000573603 OTUD5Q96G74 571 aa15.5■□□□□ 0.07
POLR2A-202ENST00000573603 CDCA7LQ96GN5 454 aa15.5■□□□□ 0.07
POLR2A-202ENST00000573603 PTPN18Q99952 460 aa15.5■□□□□ 0.07
POLR2A-202ENST00000573603 TMOD2Q9NZR1 351 aa15.5■□□□□ 0.07
POLR2A-202ENST00000573603 CSADQ9Y600 493 aa15.5■□□□□ 0.07
POLR2A-202ENST00000573603 SLC5A1P13866 664 aa15.49■□□□□ 0.07
POLR2A-202ENST00000573603 FGFR2P21802 821 aa15.49■□□□□ 0.07
POLR2A-202ENST00000573603 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.49■□□□□ 0.07
POLR2A-202ENST00000573603 ERO1AQ96HE7 468 aa15.49■□□□□ 0.07
POLR2A-202ENST00000573603 MAST3O60307 1309 aa15.48■□□□□ 0.07
POLR2A-202ENST00000573603 CCL15-CCL14A0A0B4J2E2 113 aa15.48■□□□□ 0.07
POLR2A-202ENST00000573603 TESPA1A2RU30 521 aaPredicted RBP15.48■□□□□ 0.07
POLR2A-202ENST00000573603 EYA2O00167 538 aa15.48■□□□□ 0.07
POLR2A-202ENST00000573603 RFX5P48382 616 aaPredicted RBP15.48■□□□□ 0.07
POLR2A-202ENST00000573603 MAP3K9P80192 1104 aa15.48■□□□□ 0.07
POLR2A-202ENST00000573603 HDLBPQ00341 1268 aaKnown RBP15.48■□□□□ 0.07
POLR2A-202ENST00000573603 CCL15Q16663 113 aa15.48■□□□□ 0.07
POLR2A-202ENST00000573603 ALDH1L2Q3SY69 923 aa15.48■□□□□ 0.07
POLR2A-202ENST00000573603 BRI3BPQ8WY22 251 aa15.48■□□□□ 0.07
POLR2A-202ENST00000573603 ZDHHC15Q96MV8 337 aa15.48■□□□□ 0.07
POLR2A-202ENST00000573603 SIL1Q9H173 461 aa15.48■□□□□ 0.07
POLR2A-202ENST00000573603 HTTP42858 3142 aa15.48■□□□□ 0.07
POLR2A-202ENST00000573603 KIF16BQ96L93 1317 aa15.47■□□□□ 0.07
POLR2A-202ENST00000573603 TAF1CQ15572 869 aaPredicted RBP15.47■□□□□ 0.07
POLR2A-202ENST00000573603 MS4A4AQ96JQ5 239 aa15.47■□□□□ 0.07
POLR2A-202ENST00000573603 WRNIP1Q96S55 665 aa15.47■□□□□ 0.07
POLR2A-202ENST00000573603 ZSWIM8A7E2V4 1837 aa15.46■□□□□ 0.07
POLR2A-202ENST00000573603 UBTFL1P0CB47 393 aaPredicted RBP15.46■□□□□ 0.07
POLR2A-202ENST00000573603 GTF2A2P52657 109 aa15.46■□□□□ 0.07
POLR2A-202ENST00000573603 SP3Q02447 781 aa15.46■□□□□ 0.07
POLR2A-202ENST00000573603 PRPF38BQ5VTL8 546 aaKnown RBP15.46■□□□□ 0.07
POLR2A-202ENST00000573603 APOBEC3HQ6NTF7 200 aaKnown RBP15.46■□□□□ 0.07
POLR2A-202ENST00000573603 LPIN2Q92539 896 aa15.46■□□□□ 0.07
POLR2A-202ENST00000573603 EFCC1Q9HA90 598 aa15.46■□□□□ 0.07
POLR2A-202ENST00000573603 SNCAIPQ9Y6H5 919 aa15.46■□□□□ 0.07
POLR2A-202ENST00000573603 RBBP6Q7Z6E9 1792 aaKnown RBP15.46■□□□□ 0.07
POLR2A-202ENST00000573603 SPDYE5A6NIY4 337 aa15.45■□□□□ 0.06
POLR2A-202ENST00000573603 CAP1Q01518 475 aa15.45■□□□□ 0.06
POLR2A-202ENST00000573603 ATG9AQ7Z3C6 839 aa15.45■□□□□ 0.06
POLR2A-202ENST00000573603 FAM83AQ86UY5 434 aa15.45■□□□□ 0.06
POLR2A-202ENST00000573603 FAM43AQ8N2R8 423 aa15.45■□□□□ 0.06
POLR2A-202ENST00000573603 ZKSCAN4Q969J2 545 aaPredicted RBP15.45■□□□□ 0.06
POLR2A-202ENST00000573603 PTPN22Q9Y2R2 807 aa15.45■□□□□ 0.06
POLR2A-202ENST00000573603 SUGT1Q9Y2Z0 365 aa15.45■□□□□ 0.06
POLR2A-202ENST00000573603 RPAP1Q9BWH6 1393 aaPredicted RBP15.45■□□□□ 0.06
POLR2A-202ENST00000573603 AK9Q5TCS8 1911 aa15.45■□□□□ 0.06
POLR2A-202ENST00000573603 POTEFA5A3E0 1075 aa15.44■□□□□ 0.06
POLR2A-202ENST00000573603 DIXDC1Q155Q3 683 aa15.44■□□□□ 0.06
POLR2A-202ENST00000573603 ATP2B3Q16720 1220 aa15.44■□□□□ 0.06
POLR2A-202ENST00000573603 HHIPL2Q6UWX4 724 aa15.44■□□□□ 0.06
POLR2A-202ENST00000573603 WDR66Q8TBY9 1149 aa15.44■□□□□ 0.06
POLR2A-202ENST00000573603 ZFYVE28Q9HCC9 887 aa15.44■□□□□ 0.06
POLR2A-202ENST00000573603 NOB1Q9ULX3 412 aaKnown RBP15.44■□□□□ 0.06
POLR2A-202ENST00000573603 PRDX5P30044 214 aa15.43■□□□□ 0.06
POLR2A-202ENST00000573603 TCP10Q12799 353 aa15.43■□□□□ 0.06
POLR2A-202ENST00000573603 DCAF15Q66K64 600 aa15.43■□□□□ 0.06
POLR2A-202ENST00000573603 MIGA2Q7L4E1 593 aa15.43■□□□□ 0.06
POLR2A-202ENST00000573603 HOOK2Q96ED9 719 aa15.43■□□□□ 0.06
POLR2A-202ENST00000573603 DAGLAQ9Y4D2 1042 aa15.43■□□□□ 0.06
POLR2A-202ENST00000573603 LRRFIP2Q9Y608 721 aaKnown RBP15.43■□□□□ 0.06
POLR2A-202ENST00000573603 DOCK2Q92608 1830 aa15.43■□□□□ 0.06
POLR2A-202ENST00000573603 CIAO1O76071 339 aa15.42■□□□□ 0.06
POLR2A-202ENST00000573603 FKBP1CQ5VVH2 108 aa15.42■□□□□ 0.06
POLR2A-202ENST00000573603 ERO1BQ86YB8 467 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms