RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 GNAI2P04899 355 aa15.78■□□□□ 0.12
NPLOC4-213ENST00000573519 MKRN3Q13064 507 aaKnown RBP15.78■□□□□ 0.12
NPLOC4-213ENST00000573519 FTSJ3Q8IY81 847 aaKnown RBP15.78■□□□□ 0.12
NPLOC4-213ENST00000573519 DZIP1LQ8IYY4 767 aaKnown RBP15.78■□□□□ 0.12
NPLOC4-213ENST00000573519 TMEM57Q8N5G2 664 aa15.78■□□□□ 0.12
NPLOC4-213ENST00000573519 COPRSQ9NQ92 184 aa15.78■□□□□ 0.12
NPLOC4-213ENST00000573519 ZNF70Q9UC06 446 aaPredicted RBP15.78■□□□□ 0.12
NPLOC4-213ENST00000573519 ECM29Q5VYK3 1845 aa15.78■□□□□ 0.12
NPLOC4-213ENST00000573519 TNFAIP1Q13829 316 aa15.77■□□□□ 0.12
NPLOC4-213ENST00000573519 RASA3Q14644 834 aa15.77■□□□□ 0.12
NPLOC4-213ENST00000573519 SUPT20HL1Q3ZLR7 823 aa15.77■□□□□ 0.12
NPLOC4-213ENST00000573519 SPDYE2Q495Y8 402 aa15.77■□□□□ 0.12
NPLOC4-213ENST00000573519 TEKT1Q969V4 418 aa15.77■□□□□ 0.12
NPLOC4-213ENST00000573519 CSRNP1Q96S65 589 aa15.77■□□□□ 0.12
NPLOC4-213ENST00000573519 GNL3LQ9NVN8 582 aaKnown RBP15.77■□□□□ 0.12
NPLOC4-213ENST00000573519 TCP10L2B9ZVM9 353 aa15.76■□□□□ 0.11
NPLOC4-213ENST00000573519 PPP1R12BO60237 982 aaPredicted RBP15.76■□□□□ 0.11
NPLOC4-213ENST00000573519 TRPA1O75762 1119 aa15.76■□□□□ 0.11
NPLOC4-213ENST00000573519 NBPF12Q5TAG4 269 aaPredicted RBP15.76■□□□□ 0.11
NPLOC4-213ENST00000573519 RNF186Q9NXI6 227 aa15.76■□□□□ 0.11
NPLOC4-213ENST00000573519 MAST3O60307 1309 aa15.75■□□□□ 0.11
NPLOC4-213ENST00000573519 TNNI2P48788 182 aa15.75■□□□□ 0.11
NPLOC4-213ENST00000573519 TFCP2Q12800 502 aa15.75■□□□□ 0.11
NPLOC4-213ENST00000573519 MTX1Q13505 466 aa15.75■□□□□ 0.11
NPLOC4-213ENST00000573519 REM2Q8IYK8 340 aaPredicted RBP15.75■□□□□ 0.11
NPLOC4-213ENST00000573519 WDR66Q8TBY9 1149 aa15.75■□□□□ 0.11
NPLOC4-213ENST00000573519 SAGE1Q9NXZ1 904 aa15.75■□□□□ 0.11
NPLOC4-213ENST00000573519 SSC5DA1L4H1 1573 aa15.75■□□□□ 0.11
NPLOC4-213ENST00000573519 ADORA1P30542 326 aa15.74■□□□□ 0.11
NPLOC4-213ENST00000573519 PHKA1P46020 1223 aa15.74■□□□□ 0.11
NPLOC4-213ENST00000573519 CACNB3P54284 484 aa15.74■□□□□ 0.11
NPLOC4-213ENST00000573519 TIMM10P62072 90 aa15.74■□□□□ 0.11
NPLOC4-213ENST00000573519 HDLBPQ00341 1268 aaKnown RBP15.74■□□□□ 0.11
NPLOC4-213ENST00000573519 ITPRIPQ8IWB1 547 aa15.74■□□□□ 0.11
NPLOC4-213ENST00000573519 TMOD2Q9NZR1 351 aa15.74■□□□□ 0.11
NPLOC4-213ENST00000573519 SUGT1Q9Y2Z0 365 aa15.74■□□□□ 0.11
NPLOC4-213ENST00000573519 PNMA6EA0A0J9YXQ4 647 aa15.73■□□□□ 0.11
NPLOC4-213ENST00000573519 LDLRAD1Q5T700 205 aa15.73■□□□□ 0.11
NPLOC4-213ENST00000573519 CCDC102BQ68D86 513 aa15.73■□□□□ 0.11
NPLOC4-213ENST00000573519 SLC10A4Q96EP9 437 aa15.73■□□□□ 0.11
NPLOC4-213ENST00000573519 ZDHHC15Q96MV8 337 aa15.73■□□□□ 0.11
NPLOC4-213ENST00000573519 NEUROD6Q96NK8 337 aa15.73■□□□□ 0.11
NPLOC4-213ENST00000573519 TMEM39BQ9GZU3 492 aa15.73■□□□□ 0.11
NPLOC4-213ENST00000573519 DENND2AQ9ULE3 1009 aa15.73■□□□□ 0.11
NPLOC4-213ENST00000573519 AKAP2Q9Y2D5 859 aa15.73■□□□□ 0.11
NPLOC4-213ENST00000573519 A0A1B0GUL7 405 aa15.72■□□□□ 0.11
NPLOC4-213ENST00000573519 IREB2P48200 963 aaKnown RBP15.72■□□□□ 0.11
NPLOC4-213ENST00000573519 G3BP1Q13283 466 aaKnown RBP eCLIP15.72■□□□□ 0.11
NPLOC4-213ENST00000573519 CLMNQ96JQ2 1002 aa15.72■□□□□ 0.11
NPLOC4-213ENST00000573519 C1orf115Q9H7X2 142 aa15.72■□□□□ 0.11
NPLOC4-213ENST00000573519 MYH13Q9UKX3 1938 aa15.72■□□□□ 0.11
NPLOC4-213ENST00000573519 SEMA3EO15041 775 aa15.71■□□□□ 0.11
NPLOC4-213ENST00000573519 USP2O75604 605 aaPredicted RBP15.71■□□□□ 0.11
NPLOC4-213ENST00000573519 LDHBP07195 334 aaKnown RBP15.71■□□□□ 0.11
NPLOC4-213ENST00000573519 PRDX5P30044 214 aa15.71■□□□□ 0.11
NPLOC4-213ENST00000573519 SREBF2Q12772 1141 aa15.71■□□□□ 0.11
NPLOC4-213ENST00000573519 MAP3K11Q16584 847 aa15.71■□□□□ 0.11
NPLOC4-213ENST00000573519 CDAN1Q8IWY9 1227 aa15.71■□□□□ 0.11
NPLOC4-213ENST00000573519 XAGE2Q96GT9 111 aa15.71■□□□□ 0.11
NPLOC4-213ENST00000573519 MRIQ9BWK5 157 aa15.71■□□□□ 0.11
NPLOC4-213ENST00000573519 RLBP1P12271 317 aa15.7■□□□□ 0.1
NPLOC4-213ENST00000573519 OS9Q13438 667 aaPredicted RBP15.7■□□□□ 0.1
NPLOC4-213ENST00000573519 MVPQ14764 893 aaKnown RBP15.7■□□□□ 0.1
NPLOC4-213ENST00000573519 DIXDC1Q155Q3 683 aa15.7■□□□□ 0.1
NPLOC4-213ENST00000573519 GORABQ5T7V8 394 aa15.7■□□□□ 0.1
NPLOC4-213ENST00000573519 SPRYD7Q5W111 196 aa15.7■□□□□ 0.1
NPLOC4-213ENST00000573519 APOBEC3HQ6NTF7 200 aaKnown RBP15.7■□□□□ 0.1
NPLOC4-213ENST00000573519 HHIPL2Q6UWX4 724 aa15.7■□□□□ 0.1
NPLOC4-213ENST00000573519 ABHD8Q96I13 439 aa15.7■□□□□ 0.1
NPLOC4-213ENST00000573519 TEPSINQ96N21 525 aa15.7■□□□□ 0.1
NPLOC4-213ENST00000573519 TBC1D8O95759 1140 aa15.69■□□□□ 0.1
NPLOC4-213ENST00000573519 DGKZQ13574 1117 aa15.69■□□□□ 0.1
NPLOC4-213ENST00000573519 RASGRF1Q13972 1273 aa15.69■□□□□ 0.1
NPLOC4-213ENST00000573519 ANKRD13AQ8IZ07 590 aa15.69■□□□□ 0.1
NPLOC4-213ENST00000573519 ZGPATQ8N5A5 531 aaKnown RBP15.69■□□□□ 0.1
NPLOC4-213ENST00000573519 WNK4Q96J92 1243 aa15.69■□□□□ 0.1
NPLOC4-213ENST00000573519 ABCF2Q9UG63 623 aa15.69■□□□□ 0.1
NPLOC4-213ENST00000573519 DAGLAQ9Y4D2 1042 aa15.69■□□□□ 0.1
NPLOC4-213ENST00000573519 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.69■□□□□ 0.1
NPLOC4-213ENST00000573519 TM4SF4P48230 202 aa15.68■□□□□ 0.1
NPLOC4-213ENST00000573519 PANK1Q8TE04 598 aa15.68■□□□□ 0.1
NPLOC4-213ENST00000573519 ELP3Q9H9T3 547 aa15.68■□□□□ 0.1
NPLOC4-213ENST00000573519 AKAP11Q9UKA4 1901 aa15.68■□□□□ 0.1
NPLOC4-213ENST00000573519 SALL1Q9NSC2 1324 aa15.68■□□□□ 0.1
NPLOC4-213ENST00000573519 MANSC4A6NHS7 340 aaPredicted RBP15.67■□□□□ 0.1
NPLOC4-213ENST00000573519 UNCXA6NJT0 531 aa15.67■□□□□ 0.1
NPLOC4-213ENST00000573519 ZBTB7BO15156 539 aaPredicted RBP15.67■□□□□ 0.1
NPLOC4-213ENST00000573519 ZBTB48P10074 688 aaPredicted RBP15.67■□□□□ 0.1
NPLOC4-213ENST00000573519 ATP8B2P98198 1209 aa15.67■□□□□ 0.1
NPLOC4-213ENST00000573519 DZIP1Q86YF9 867 aaKnown RBP15.67■□□□□ 0.1
NPLOC4-213ENST00000573519 MCOLN1Q9GZU1 580 aa15.67■□□□□ 0.1
NPLOC4-213ENST00000573519 CCDC85CA6NKD9 419 aa15.66■□□□□ 0.1
NPLOC4-213ENST00000573519 SURF6O75683 361 aaKnown RBP15.66■□□□□ 0.1
NPLOC4-213ENST00000573519 TCP10Q12799 353 aa15.66■□□□□ 0.1
NPLOC4-213ENST00000573519 POLA2Q14181 598 aa15.66■□□□□ 0.1
NPLOC4-213ENST00000573519 CDC42EP5Q6NZY7 148 aa15.66■□□□□ 0.1
NPLOC4-213ENST00000573519 FAM83AQ86UY5 434 aa15.66■□□□□ 0.1
NPLOC4-213ENST00000573519 USP40Q9NVE5 1235 aa15.66■□□□□ 0.1
NPLOC4-213ENST00000573519 CSADQ9Y600 493 aa15.66■□□□□ 0.1
NPLOC4-213ENST00000573519 MAP3K9P80192 1104 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms