RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 OTOFQ9HC10 1997 aa18.58■□□□□ 0.56
NPLOC4-207ENST00000572346 GJA5P36382 358 aa18.57■□□□□ 0.56
NPLOC4-207ENST00000572346 DZIP1LQ8IYY4 767 aaKnown RBP18.57■□□□□ 0.56
NPLOC4-207ENST00000572346 ANKRD13AQ8IZ07 590 aa18.57■□□□□ 0.56
NPLOC4-207ENST00000572346 ALDH1L2Q3SY69 923 aa18.56■□□□□ 0.56
NPLOC4-207ENST00000572346 LRRC24Q50LG9 513 aa18.56■□□□□ 0.56
NPLOC4-207ENST00000572346 FBXO33Q7Z6M2 555 aa18.56■□□□□ 0.56
NPLOC4-207ENST00000572346 MRPL50Q8N5N7 158 aaKnown RBP18.56■□□□□ 0.56
NPLOC4-207ENST00000572346 ANKRD44Q8N8A2 993 aa18.56■□□□□ 0.56
NPLOC4-207ENST00000572346 SMC4Q9NTJ3 1288 aa18.56■□□□□ 0.56
NPLOC4-207ENST00000572346 IQSEC3Q9UPP2 1182 aaPredicted RBP18.56■□□□□ 0.56
NPLOC4-207ENST00000572346 CRKP46108 304 aa18.55■□□□□ 0.56
NPLOC4-207ENST00000572346 GRIK5Q16478 980 aa18.55■□□□□ 0.56
NPLOC4-207ENST00000572346 VPS37DQ86XT2 251 aa18.55■□□□□ 0.56
NPLOC4-207ENST00000572346 CDAN1Q8IWY9 1227 aa18.55■□□□□ 0.56
NPLOC4-207ENST00000572346 SSH1Q8WYL5 1049 aa18.55■□□□□ 0.56
NPLOC4-207ENST00000572346 TEPSINQ96N21 525 aa18.55■□□□□ 0.56
NPLOC4-207ENST00000572346 TCP10L2B9ZVM9 353 aa18.54■□□□□ 0.56
NPLOC4-207ENST00000572346 METTL24Q5JXM2 366 aa18.54■□□□□ 0.56
NPLOC4-207ENST00000572346 VGLL2Q8N8G2 317 aa18.54■□□□□ 0.56
NPLOC4-207ENST00000572346 ELP3Q9H9T3 547 aa18.54■□□□□ 0.56
NPLOC4-207ENST00000572346 TRIM17Q9Y577 477 aa18.54■□□□□ 0.56
NPLOC4-207ENST00000572346 PTPRCP08575 1304 aa18.53■□□□□ 0.56
NPLOC4-207ENST00000572346 TESPA1A2RU30 521 aaPredicted RBP18.53■□□□□ 0.56
NPLOC4-207ENST00000572346 PDE8BO95263 885 aa18.53■□□□□ 0.56
NPLOC4-207ENST00000572346 CHAF1AQ13111 956 aaPredicted RBP18.53■□□□□ 0.56
NPLOC4-207ENST00000572346 CRHR2Q13324 411 aa18.53■□□□□ 0.56
NPLOC4-207ENST00000572346 CAVIN4Q5BKX8 364 aa18.53■□□□□ 0.56
NPLOC4-207ENST00000572346 OTUD7BQ6GQQ9 843 aa18.53■□□□□ 0.56
NPLOC4-207ENST00000572346 OTOP1Q7RTM1 612 aa18.53■□□□□ 0.56
NPLOC4-207ENST00000572346 OPTNQ96CV9 577 aa18.53■□□□□ 0.56
NPLOC4-207ENST00000572346 PTPN18Q99952 460 aa18.53■□□□□ 0.56
NPLOC4-207ENST00000572346 TMEM39BQ9GZU3 492 aa18.53■□□□□ 0.56
NPLOC4-207ENST00000572346 FRAT2O75474 233 aaPredicted RBP18.52■□□□□ 0.56
NPLOC4-207ENST00000572346 TNNI2P48788 182 aa18.52■□□□□ 0.56
NPLOC4-207ENST00000572346 RARSP54136 660 aaKnown RBP18.52■□□□□ 0.56
NPLOC4-207ENST00000572346 HDLBPQ00341 1268 aaKnown RBP18.52■□□□□ 0.56
NPLOC4-207ENST00000572346 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.52■□□□□ 0.56
NPLOC4-207ENST00000572346 KLHDC4Q8TBB5 520 aa18.52■□□□□ 0.56
NPLOC4-207ENST00000572346 TBC1D22AQ8WUA7 517 aa18.52■□□□□ 0.56
NPLOC4-207ENST00000572346 PRPF38BQ5VTL8 546 aaKnown RBP18.51■□□□□ 0.55
NPLOC4-207ENST00000572346 ERO1AQ96HE7 468 aa18.51■□□□□ 0.55
NPLOC4-207ENST00000572346 MS4A4AQ96JQ5 239 aa18.51■□□□□ 0.55
NPLOC4-207ENST00000572346 USP44Q9H0E7 712 aa18.51■□□□□ 0.55
NPLOC4-207ENST00000572346 BCAMP50895 628 aa18.5■□□□□ 0.55
NPLOC4-207ENST00000572346 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.5■□□□□ 0.551e-6■■■■■ 29.6
NPLOC4-207ENST00000572346 CD99L2Q8TCZ2 262 aa18.5■□□□□ 0.55
NPLOC4-207ENST00000572346 CNKSR2Q8WXI2 1034 aa18.5■□□□□ 0.55
NPLOC4-207ENST00000572346 TEKT1Q969V4 418 aa18.5■□□□□ 0.55
NPLOC4-207ENST00000572346 CACNB3P54284 484 aa18.49■□□□□ 0.55
NPLOC4-207ENST00000572346 MAP3K9P80192 1104 aa18.49■□□□□ 0.55
NPLOC4-207ENST00000572346 VGLL4Q14135 290 aa18.49■□□□□ 0.55
NPLOC4-207ENST00000572346 FGFR2P21802 821 aa18.48■□□□□ 0.55
NPLOC4-207ENST00000572346 SP3Q02447 781 aa18.48■□□□□ 0.55
NPLOC4-207ENST00000572346 PUM3Q15397 648 aaKnown RBP18.48■□□□□ 0.55
NPLOC4-207ENST00000572346 BRI3BPQ8WY22 251 aa18.48■□□□□ 0.55
NPLOC4-207ENST00000572346 ZDHHC15Q96MV8 337 aa18.48■□□□□ 0.55
NPLOC4-207ENST00000572346 MRIQ9BWK5 157 aa18.48■□□□□ 0.55
NPLOC4-207ENST00000572346 PTPN22Q9Y2R2 807 aa18.48■□□□□ 0.55
NPLOC4-207ENST00000572346 KIF16BQ96L93 1317 aa18.48■□□□□ 0.55
NPLOC4-207ENST00000572346 HTTP42858 3142 aa18.47■□□□□ 0.55
NPLOC4-207ENST00000572346 BCAR3O75815 825 aa18.47■□□□□ 0.55
NPLOC4-207ENST00000572346 IFIT1P09914 478 aaKnown RBP18.47■□□□□ 0.55
NPLOC4-207ENST00000572346 CAP1Q01518 475 aa18.47■□□□□ 0.55
NPLOC4-207ENST00000572346 RCAN3Q9UKA8 241 aa18.47■□□□□ 0.55
NPLOC4-207ENST00000572346 CSADQ9Y600 493 aa18.47■□□□□ 0.55
NPLOC4-207ENST00000572346 MYH13Q9UKX3 1938 aa18.47■□□□□ 0.55
NPLOC4-207ENST00000572346 CCL15-CCL14A0A0B4J2E2 113 aa18.46■□□□□ 0.55
NPLOC4-207ENST00000572346 IPO8O15397 1037 aaKnown RBP18.46■□□□□ 0.55
NPLOC4-207ENST00000572346 RFX5P48382 616 aaPredicted RBP18.46■□□□□ 0.55
NPLOC4-207ENST00000572346 GTF2A2P52657 109 aa18.46■□□□□ 0.55
NPLOC4-207ENST00000572346 CCL15Q16663 113 aa18.46■□□□□ 0.55
NPLOC4-207ENST00000572346 INTS3Q68E01 1043 aaKnown RBP18.46■□□□□ 0.55
NPLOC4-207ENST00000572346 APOBEC3HQ6NTF7 200 aaKnown RBP18.46■□□□□ 0.55
NPLOC4-207ENST00000572346 FRAT1Q92837 279 aaPredicted RBP18.46■□□□□ 0.55
NPLOC4-207ENST00000572346 OTUD5Q96G74 571 aa18.46■□□□□ 0.55
NPLOC4-207ENST00000572346 EFCC1Q9HA90 598 aa18.46■□□□□ 0.55
NPLOC4-207ENST00000572346 TMOD2Q9NZR1 351 aa18.46■□□□□ 0.55
NPLOC4-207ENST00000572346 NOB1Q9ULX3 412 aaKnown RBP18.46■□□□□ 0.55
NPLOC4-207ENST00000572346 SUGT1Q9Y2Z0 365 aa18.46■□□□□ 0.55
NPLOC4-207ENST00000572346 MAST3O60307 1309 aa18.46■□□□□ 0.55
NPLOC4-207ENST00000572346 POTEFA5A3E0 1075 aa18.45■□□□□ 0.54
NPLOC4-207ENST00000572346 SPDYE5A6NIY4 337 aa18.45■□□□□ 0.54
NPLOC4-207ENST00000572346 EYA2O00167 538 aa18.45■□□□□ 0.54
NPLOC4-207ENST00000572346 TAF1CQ15572 869 aaPredicted RBP18.45■□□□□ 0.54
NPLOC4-207ENST00000572346 FKBP1CQ5VVH2 108 aa18.45■□□□□ 0.54
NPLOC4-207ENST00000572346 FAM83AQ86UY5 434 aa18.45■□□□□ 0.54
NPLOC4-207ENST00000572346 KIAA0100Q14667 2235 aaKnown RBP18.44■□□□□ 0.54
NPLOC4-207ENST00000572346 HHIPL2Q6UWX4 724 aa18.44■□□□□ 0.54
NPLOC4-207ENST00000572346 FAM43AQ8N2R8 423 aa18.44■□□□□ 0.54
NPLOC4-207ENST00000572346 API5Q9BZZ5 524 aaKnown RBP18.44■□□□□ 0.54
NPLOC4-207ENST00000572346 ZFYVE28Q9HCC9 887 aa18.44■□□□□ 0.54
NPLOC4-207ENST00000572346 SNCAIPQ9Y6H5 919 aa18.44■□□□□ 0.54
NPLOC4-207ENST00000572346 RBBP6Q7Z6E9 1792 aaKnown RBP18.44■□□□□ 0.54
NPLOC4-207ENST00000572346 SLC5A1P13866 664 aa18.43■□□□□ 0.54
NPLOC4-207ENST00000572346 ATG9AQ7Z3C6 839 aa18.43■□□□□ 0.54
NPLOC4-207ENST00000572346 LPIN2Q92539 896 aa18.43■□□□□ 0.54
NPLOC4-207ENST00000572346 ZKSCAN4Q969J2 545 aaPredicted RBP18.43■□□□□ 0.54
NPLOC4-207ENST00000572346 ARMC5Q96C12 935 aa18.43■□□□□ 0.54
NPLOC4-207ENST00000572346 WRNIP1Q96S55 665 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms